BAC Information

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BAC

Clone NameB6Ng01-067F20
Chromosome14 (Build37)
Map Location 42,258,287 - 42,388,507
singlet/doubletdoublet
Overlap geneLOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722
Upstream geneLOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149
Downstream geneLOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067F20.bB6Ng01-067F20.g
ACCDH886275DH886276
length1,1851,121
definitionDH886275|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F20, 5' end.DH886276|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,387,311 - 42,388,507)(42,258,287 - 42,259,418)
sequence
gaattcagtgttcatcctgtggtagagcatggcccaaagagtaaatcatc
cgctgaactaagcaatcaagtatcatgtgctaaaaggctgtatctggact
atccaagccaattgtatgacacatccttgctcctttaaagtgggtcctat
tggtgctgattaaatatcttgagcagaagacagcagagccaggggaccaa
atggagatggctgacattcaagagcttcttatgtgagcctgaaggaatat
actagttctgtgagatgtttctaaagactgtcccacaggctttggtcctt
agatataaggcttttttctcctctttgttttaaggaagggataatccttc
catcctattgctacatgaattctcagaggacataactagtatttacaaag
aaaaaggctttataacacctcctaccccaggagattcctatgtgatacca
aggtaaacacagggaacaaagtaccctgatgattaacttgggcctctaag
gactcaacactatcatgccctacaaactgtgtatcaaacaaatcctcaga
ccccatcaaaggtctcagaaacttagatcctgaacaaaacacacacaact
aatttcacacacacacacacaattaaaattccaaatgaatccaggtaggt
tccagagtacaatgaataaaacaagagtaaagcagtaatggcctgcagac
attgcacttttacacagtaaggcagcagttgtgaccaggtccttccagct
gttgacagaaccaatcagactccaagccccacaagggcaaatacaaaaga
ggatgaccatagaacacacagtacttatctcatccaacaattaaaacaac
tgtcaagacttcttataatgaatgtgagagatgacacactccattatgag
agaaaatgtgggtttacagagaggacacaatacagtcaacagaatacagg
gcatatttacctgtagttcaaatcagtattcatgtcaatgtccagattcg
aaaaagttctacctctcagcatttatcttctgaaataaaatttcatatca
tctaggttattcatattctccatatgataagtgatgtgcaattttgggat
gatgttcccacgaaactgaagaatagataaacaaaaatgcattggctagt
gatggtcaggggcaggggaacattctgagtcccaa
gaattccacgggcctatgtttaggagtctggggacagggacccacaaaat
cctggacatccagacagtgctgtgttgcagagagttcacagcaggtttga
ccctgctggcctgcaaggataacagggcaaggggttctcagaatcttaga
catgcaggcactgctagaagtctcagaggagctgagcatggaggaggcca
gcaggctgagaactagccctgaaatcagggaatggggaattctggattag
ctcagaggtgactagcccaggagtattgaggggccttctgttggagactt
agatggcaagactctgtaggcaaaggctttttctccatgtaacccacagt
tggtttgatgagagagacagtccttggttgtaaactgtttattgcttttc
atggaaaagaaagcataacatgtctcgaggttagactagaagttaagtac
cttgtgaggaaggaatgtccaggaagggaaggttattgactgaaccctac
catcttctaggtacctcattagcagggaaaaccctattctgttctaaatg
accacaggccatgttcctatgtagagattttggtcccatgaaagaggcct
gctaggaagcaggtgacacttttgctatctactttaggtctgggacttcc
aacccactcaaatttaccaaattctggacatggtagtctactgtcccagg
tcttagtctgagatttattgatattaggaaacaccaggacatatgtttag
tatgcaggtctcagtgcctaccctccacactgacacactgtttctaacaa
ggccacaactcctaaaagtaacacccccatattcaagccaccacactcct
ctgcaatctcccagacatttacctcactctgtcctactgttttccttttt
ctccttacaaattatgggttctatttatttcttgaaatatactcctataa
cccaacaatagtgcattaccttctatggatactgcagtttaataaacatc
tctagactttcaatgttaccatcctcataagacaatcatgagtcttgtct
ttttggtgtgggtcatatcactagaaagattatcaggtcctatccattta
cctggaaatttcattatattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42387311_42388507
seq2: B6Ng01-067F20.b_48_1232 (reverse)

seq1  TTGGGACTCAGAATGGTCTCCCCTGCCCTGGGCCATCAACTATGCAAATG  50
      |||||||||||||||   ||||||||||  | ||||| |||| || ||||
seq2  TTGGGACTCAGAATG--TTCCCCTGCCCCTGACCATC-ACTA-GCCAATG  46

seq1  CATTTTTGTTTATCTA-TCTTCAGTGTCTGTTGGGAAAACATCATCCCAA  99
      |||||||||||||||| |||||||| ||   ||||  |||||||||||||
seq2  CATTTTTGTTTATCTATTCTTCAGTTTC--GTGGG--AACATCATCCCAA  92

seq1  AATTGCAACATCACTAATCATATGAAGAATATGAATAAACTAGATGATAT  149
      |||||| |||||||| |||||||| ||||||||||||| |||||||||||
seq2  AATTGC-ACATCACTTATCATATGGAGAATATGAATAACCTAGATGATAT  141

seq1  GAAATTTTATATCAGGAAGATAAATGCTGAGAGGTTAGAACTTTTTCGAA  199
      |||||||||| ||| ||||||||||||||||||| |||||||||||||||
seq2  GAAATTTTATTTCA-GAAGATAAATGCTGAGAGG-TAGAACTTTTTCGAA  189

seq1  TCTTGGACATTGACATGAATACTGATTTGAACTACAGGTAAAATTATGCC  249
      || |||||||||||||||||||||||||||||||||||||||  ||||||
seq2  TC-TGGACATTGACATGAATACTGATTTGAACTACAGGTAAA--TATGCC  236

seq1  CTGTATTCTGTTGACTGTATTGTGTCCTCTCTGTAAACCCACATTTTCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCTGTTGACTGTATTGTGTCCTCTCTGTAAACCCACATTTTCTC  286

seq1  TCATAATGGAGTGTGTCATCTCTCACATTCATTATAAGAAGTCTTGACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATGGAGTGTGTCATCTCTCACATTCATTATAAGAAGTCTTGACAG  336

seq1  TTG-TTTAATTGTTGGATGAGATAAGTACTGTGTGTTCTATGGTCATCCT  398
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAATTGTTGGATGAGATAAGTACTGTGTGTTCTATGGTCATCCT  386

seq1  CTTTTGTATTTGCCCTTGTGGGGCTTGGAGTCTGATTGGTTCTGTCAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTATTTGCCCTTGTGGGGCTTGGAGTCTGATTGGTTCTGTCAACA  436

seq1  GCTGGAAGGACCTGGTCACAACTGCTGCCTTACTGTGTAAAAGTGCAATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGGACCTGGTCACAACTGCTGCCTTACTGTGTAAAAGTGCAATG  486

seq1  TCTGCAGGCCATTACTGCTTTACTCTTGTTTTATTCATTGTACTCTGGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGCCATTACTGCTTTACTCTTGTTTTATTCATTGTACTCTGGAA  536

seq1  CCTACCTGGATTCATTTGGAATTTTAATTGTGTGTGTGTGTGTGAAATTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTGGATTCATTTGGAATTTTAATTGTGTGTGTGTGTGTGAAATTA  586

seq1  GTTGTGTGTGTTTTGTTCAGGATCTAAGTTTCTGAGACCTTTGATGGGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTGTGTTTTGTTCAGGATCTAAGTTTCTGAGACCTTTGATGGGGT  636

seq1  CTGAGGATTTGTTTGATACACAGTTTGTAGGGCATGATAGTGTTGAGTCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATTTGTTTGATACACAGTTTGTAGGGCATGATAGTGTTGAGTCC  686

seq1  TTAGAGGCCCAAGTTAATCATCAGGGTACTTTGTTCCCTGTGTTTACCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGCCCAAGTTAATCATCAGGGTACTTTGTTCCCTGTGTTTACCTT  736

seq1  GGTATCACATAGGAATCTCCTGGGGTAGGAGGTGTTATAAAGCCTTTTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCACATAGGAATCTCCTGGGGTAGGAGGTGTTATAAAGCCTTTTTC  786

seq1  TTTGTAAATACTAGTTATGTCCTCTGAGAATTCATGTAGCAATAGGATGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATACTAGTTATGTCCTCTGAGAATTCATGTAGCAATAGGATGG  836

seq1  AAGGATTATCCCTTCCTTAAAACAAAGAGGAGAAAAAAGCCTTATATCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTATCCCTTCCTTAAAACAAAGAGGAGAAAAAAGCCTTATATCTA  886

seq1  AGGACCAAAGCCTGTGGGACAGTCTTTAGAAACATCTCACAGAACTAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAAAGCCTGTGGGACAGTCTTTAGAAACATCTCACAGAACTAGTA  936

seq1  TATTCCTTCAGGCTCACATAAGAAGCTCTTGAATGTCAGCCATCTCCATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTCAGGCTCACATAAGAAGCTCTTGAATGTCAGCCATCTCCATT  986

seq1  TGGTCCCCTGGCTCTGCTGTCTTCTGCTCAAGATATTTAATCAGCACCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCCCTGGCTCTGCTGTCTTCTGCTCAAGATATTTAATCAGCACCAA  1036

seq1  TAGGACCCACTTTAAAGGAGCAAGGATGTGTCATACAATTGGCTTGGATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCCACTTTAAAGGAGCAAGGATGTGTCATACAATTGGCTTGGATA  1086

seq1  GTCCAGATACAGCCTTTTAGCACATGATACTTGATTGCTTAGTTCAGCGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGATACAGCCTTTTAGCACATGATACTTGATTGCTTAGTTCAGCGG  1136

seq1  ATGATTTACTCTTTGGGCCATGCTCTACCACAGGATGAACACTGAATTC  1197
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTACTCTTTGGGCCATGCTCTACCACAGGATGAACACTGAATTC  1185

seq1: chr14_42258287_42259418
seq2: B6Ng01-067F20.g_70_1190

seq1  GAATTCCACGGGCCTATGTTTAGGAGTCTGGGGACAGGGACCCACAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGGGCCTATGTTTAGGAGTCTGGGGACAGGGACCCACAAAAT  50

seq1  CCTGGACATCCAGACAGTGCTGTGTTGCAGAGAGTTCACAGCAGGTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACATCCAGACAGTGCTGTGTTGCAGAGAGTTCACAGCAGGTTTGA  100

seq1  CCCTGCTGGCCTGCAAGGATAACAGGGCAAGGGGTTCTCAGAATCTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGGCCTGCAAGGATAACAGGGCAAGGGGTTCTCAGAATCTTAGA  150

seq1  CATGCAGGCACTGCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCACTGCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCCA  200

seq1  GCAGGCTGAGAACTAGCCCTGAAATCAGGGAATGGGGAATTCTGGATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGAGAACTAGCCCTGAAATCAGGGAATGGGGAATTCTGGATTAG  250

seq1  CTCAGAGGTGACTAGCCCAGGAGTATTGAGGGGCCTTCTGTTGGAGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGGTGACTAGCCCAGGAGTATTGAGGGGCCTTCTGTTGGAGACTT  300

seq1  AGATGGCAAGACTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCAAGACTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAGT  350

seq1  TGGTTTGATGAGAGAGACAGTCCTTGGTTGTAAACTGTTTATTGCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGATGAGAGAGACAGTCCTTGGTTGTAAACTGTTTATTGCTTTTC  400

seq1  ATGGAAAAGAAAGCATAACATGTCTCGAGGTTAGACTAGAAGTTAAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAGAAAGCATAACATGTCTCGAGGTTAGACTAGAAGTTAAGTAC  450

seq1  CTTGTGAGGAAGGAATGTCCAGGAAGGGAAGGTTATTGACTGAACCCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGAGGAAGGAATGTCCAGGAAGGGAAGGTTATTGACTGAACCCTAC  500

seq1  CATCTTCTAGGTACCTCATTAGCAGGGAAAACCCTATTCTGTTCTAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTAGGTACCTCATTAGCAGGGAAAACCCTATTCTGTTCTAAATG  550

seq1  ACCACAGGCCATGTTCCTATGTAGAGATTTTGGTCCCATGAAAGAGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGCCATGTTCCTATGTAGAGATTTTGGTCCCATGAAAGAGGCCT  600

seq1  GCTAGGAAGCAGGTGACACTTTTGCTATCTACTTTAGGTCTGGGACTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGAAGCAGGTGACACTTTTGCTATCTACTTTAGGTCTGGGACTTCC  650

seq1  AACCCACTCAAATTTACCAAATTCTGGACATGGTAGTCTACTGTCCCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTCAAATTTACCAAATTCTGGACATGGTAGTCTACTGTCCCAGG  700

seq1  TCTTAGTCTGAGATTTATTGATATTAGGAAACACCAGGACATATGTTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTCTGAGATTTATTGATATTAGGAAACACCAGGACATATGTTTAG  750

seq1  TATGCAGGTCTCAGTGCCTACCCTCCACACTGACACACTGTTTCTAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGGTCTCAGTGCCTACCCTCCACACTGACACACTGTTTCTAACAA  800

seq1  GGCCACAACTCCTAAAAGTAACACCCCCATATTCAAGCCACCACACTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAACTCCTAAAAGTAACACCCCCATATTCAAGCCACCACACTCCT  850

seq1  CTGCAATCTCCCAAGACATTTACCTCACTCTGTCCTACTGTTTTCCTTTT  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTGCAATCTCCC-AGACATTTACCTCACTCTGTCCTACTGTTTTCCTTTT  899

seq1  TCTCCTTCACAAATTATGTGTTCTATTATTTTCTTGAAATATACTCCTAT  950
      ||||||| |||||||||| ||||||||  |||||||||||||||||||||
seq2  TCTCCTT-ACAAATTATGGGTTCTATTTATTTCTTGAAATATACTCCTAT  948

seq1  AACCCAACAATAGTGCATTACCTTCTATGGATACTGCAGTTTAAATACAC  1000
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  AACCCAACAATAGTGCATTACCTTCTATGGATACTGCAGTTT-AATAAAC  997

seq1  ATCTCTAGACATTCAATGTTACCATCCTCATAAGACACATCATGAGTTCC  1050
      |||||||||| |||||||||||||||||||||||||| |||||||||  |
seq2  ATCTCTAGACTTTCAATGTTACCATCCTCATAAGACA-ATCATGAGT--C  1044

seq1  TTGTCTTTTTGGGTGTGGGTCATATCACTCAGAAAGATTATTCATGTCTC  1100
      |||||||||| |||||||||||||||||| |||||||||| ||| ||| |
seq2  TTGTCTTTTT-GGTGTGGGTCATATCACT-AGAAAGATTA-TCAGGTC-C  1090

seq1  TATCCATTAACCTGTAAATTTCATTTATATTG  1132
      |||||||| ||||| |||||||| ||||||||
seq2  TATCCATTTACCTGGAAATTTCA-TTATATTG  1121