BAC Information

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BAC

Clone NameB6Ng01-067O19
Chromosome14 (Build37)
Map Location 15,606,936 - 15,785,376
singlet/doubletdoublet
Overlap geneSlc4a7, Nek10
Upstream geneEG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147
Downstream geneLrrc3b, LOC667205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067O19.bB6Ng01-067O19.g
ACCDH886662DH886663
length1,106771
definitionDH886662|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O19, 5' end.DH886663|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,606,936 - 15,608,051)(15,784,601 - 15,785,376)
sequence
gaattctacatcttgatatgcaggtggcaaggagagactgggtgccccac
tggttgtgtaggttgagcataggagacctcaaagcccgctcatagagtga
catgcttcctcccacaaggccacatatcctaacagtgccattcccctttg
gccaagtattcaaacacatgagtcgatgggggacatttctattcaaatct
ccaccacagtgtattaagttacaagattgtcttgaatagaagaagaggga
atagataccactctctataaagagcaggcaagtcccatgacaagggcata
cttctaggctcaggattaatttcttctgcctttgtgaataatttaccaca
catcctaatccagccttttctttcttccttggtattttatggaatagatc
cacttatgtgctgtggaaatttggtacaataaagaaataaccttttttct
tatttttaaactttaatagcctactgatccaagtaggggctggatcataa
gccctttgggagataacccttggtggaccttactaattgcagcagttcca
gctctcctttgtactattctcatctttatggaccagcagatcacagctgt
aatcatcaacagaaaagaacacaaactcaaggtaattctgaaagccttct
ttaagggcctgcaataatttccatagcattcttcctttataattaattca
gaattttaaaacaaaggaacaatctagacttacgagtgttcgtttccctc
ttcagaaaggagctggctaccaccttgacttgctcatggttggtgtcatg
ttgggagtctgctctatcatgggcttgccgtggtttgtggctgcgacagt
gttgtctataagtcatgtcaacagcttgaaagtggagtctgagtgttctg
ctccaggggagcagcccaagtttctgggaattcgtgaacagcgggttaca
gggctgatgattttatcttgatggggctctctgtgttcatgacttcagta
taaaggtaaacccttgtggcagtgttcacatcttattaacttaacattta
tacttagttgtaagaaataaaaattgaaatatggtgagttattaaatcaa
catttt
gaattcataggttagatgtatataaagtccaccagacctccagcccgagg
taggagtcatctaagatggtgtacaagacctttcagaacgatgtgtagag
gattgtgtgtggggaatgagtgtatatatcaaaagctattatgctcagca
cttaaacacactaacactatgtatatgcaaattatgctaattttaagggg
aagagtggatgagagaattgtatctatttgaagtgagtagagctgttgaa
agacttgttttcttaaaacatagtaaccaaagaacatttcccaacaagca
gagatttcctaatttctgatatttctttccctacaacattgcttgttgca
ttttcatggccatgggagaaactcagtcagctattaaccagactataaaa
gcaaaattgttgacgaaaatactgtccttttaaaacacatgattttctgc
atggcttaatttaatctcttagcagaggattccagacacaagcttttagc
agtaggctcagcatttgtgaatgacatatggtataataaaagcaatgcaa
atggatagataaatggcaaattttaaaagtccaagtacactaaaacaata
aaagcgcatccagctgcttgcatattcttcagtttcagcaccccactgta
aaagatatctgagaatttaagaaaaaaaatcagacttctgtcaataaaga
ttctatactgtataacacaatgtgttagaaagtatattataatcccctat
gatgggatttgtgatagtcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15606936_15608051
seq2: B6Ng01-067O19.b_50_1155

seq1  GAATTCTACATCTTGATATGCAGGTGGCAAGGAGAGACTGGGTGCCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCTTGATATGCAGGTGGCAAGGAGAGACTGGGTGCCCCAC  50

seq1  TGGTTGTGTAGGTTGAGCATAGGAGACCTCAAAGCCCGCTCATAGAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGTAGGTTGAGCATAGGAGACCTCAAAGCCCGCTCATAGAGTGA  100

seq1  CATGCTTCCTCCCACAAGGCCACATATCCTAACAGTGCCATTCCCCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCCTCCCACAAGGCCACATATCCTAACAGTGCCATTCCCCTTTG  150

seq1  GCCAAGTATTCAAACACATGAGTCGATGGGGGACATTTCTATTCAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTATTCAAACACATGAGTCGATGGGGGACATTTCTATTCAAATCT  200

seq1  CCACCACAGTGTATTAAGTTACAAGATTGTCTTGAATAGAAGAAGAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACAGTGTATTAAGTTACAAGATTGTCTTGAATAGAAGAAGAGGGA  250

seq1  ATAGATACCACTCTCTATAAAGAGCAGGCAAGTCCCATGACAAGGGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATACCACTCTCTATAAAGAGCAGGCAAGTCCCATGACAAGGGCATA  300

seq1  CTTCTAGGCTCAGGATTAATTTCTTCTGCCTTTGTGAATAATTTACCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGCTCAGGATTAATTTCTTCTGCCTTTGTGAATAATTTACCACA  350

seq1  CATCCTAATCCAGCCTTTTCTTTCTTCCTTGGTATTTTATGGAATAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAATCCAGCCTTTTCTTTCTTCCTTGGTATTTTATGGAATAGATC  400

seq1  CACTTATGTGCTGTGGAAATTTGGTACAATAAAGAAATAACCTTTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATGTGCTGTGGAAATTTGGTACAATAAAGAAATAACCTTTTTTCT  450

seq1  TATTTTTAAACTTTAATAGCCTACTGATCCAAGTAGGGGCTGGATCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAAACTTTAATAGCCTACTGATCCAAGTAGGGGCTGGATCATAA  500

seq1  GCCCTTTGGGAGATAACCCTTGGTGGACCTTACTAATTGCAGCAGTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTGGGAGATAACCCTTGGTGGACCTTACTAATTGCAGCAGTTCCA  550

seq1  GCTCTCCTTTGTACTATTCTCATCTTTATGGACCAGCAGATCACAGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCTTTGTACTATTCTCATCTTTATGGACCAGCAGATCACAGCTGT  600

seq1  AATCATCAACAGAAAAGAACACAAACTCAAGGTAATTCTGAAAGCCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCAACAGAAAAGAACACAAACTCAAGGTAATTCTGAAAGCCTTCT  650

seq1  TTAAGGGCCTGCAATAATTTCCATAGCATTCTTCCTTTATAATTAATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGCCTGCAATAATTTCCATAGCATTCTTCCTTTATAATTAATTCA  700

seq1  GAATTTTAAAACAAAGGAACAATCTAGACTTACGAGTGTTCGTTTCCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAAAACAAAGGAACAATCTAGACTTACGAGTGTTCGTTTCCCTC  750

seq1  TTCAGAAAGGAGCTGGCTACCACCTTGACTTGCTCATGGTTGGTGTCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAGGAGCTGGCTACCACCTTGACTTGCTCATGGTTGGTGTCATG  800

seq1  TTGGGAGTCTGCTCTATCATGGGCTTGCCGTGGTTTGTGGCTGCGACAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTCTGCTCTATCATGGGCTTGCCGTGGTTTGTGGCTGCGACAGT  850

seq1  GTTGTCTATAAGTCATGTCAACAGCTTGAAAGTGGAGTCTGAGTGTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTATAAGTCATGTCAACAGCTTGAAAGTGGAGTCTGAGTGTTCTG  900

seq1  CTCCAGGGGAGCAGCCCAAGTTTCTGGGAATTCGTGAACAGCGGGTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGGGAGCAGCCCAAGTTTCTGGGAATTCGTGAACAGCGGGTTACA  950

seq1  GGGCTGATGATTTTTATCCTGATGGGCCTCTCTGTGTTCATGACTTCAGT  1000
      |||||||||| ||||||| ||||||| |||||||||||||||||||||||
seq2  GGGCTGATGA-TTTTATCTTGATGGGGCTCTCTGTGTTCATGACTTCAGT  999

seq1  ATTAAAGGTAAAACCCTTGTGGCAGTGTTCAACAATCTTATTTACCTTAA  1050
      | ||||||| |||||||||||||||||||||   |||||| ||| |||||
seq2  A-TAAAGGT-AAACCCTTGTGGCAGTGTTCA--CATCTTA-TTAACTTAA  1044

seq1  CATTTATACTTAGTTGTAAAGAAATAAAACATTGAAATATGTGTGAGTAT  1100
      ||||||||||||||||| ||||||||||| ||||||||||| |||||| |
seq2  CATTTATACTTAGTTGT-AAGAAATAAAA-ATTGAAATATG-GTGAGT-T  1090

seq1  ATAAAATCAACTTTTT  1116
      || |||||||| ||||
seq2  ATTAAATCAACATTTT  1106

seq1: chr14_15784601_15785376
seq2: B6Ng01-067O19.g_68_838 (reverse)

seq1  ATGACTCTCACAAACTCACATCATGGTGGGATTCTGATAATA-ACTTTCT  49
      |||||| ||||||| || |||||| | ||||||   |||||| |||||||
seq2  ATGACTATCACAAA-TCCCATCATAG-GGGATT---ATAATATACTTTCT  45

seq1  AACACATTGTGTTCTACAGTCTTAGAATTCTTTATTGACAGAAGTCTGAT  99
      ||||||||||||| ||||||  ||||| ||||||||||||||||||||||
seq2  AACACATTGTGTTATACAGT-ATAGAA-TCTTTATTGACAGAAGTCTGAT  93

seq1  TTTTTTTCTTAAATTCTCAGATATC-TTTACAGTGGGGTGCTGAAACTGA  148
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTTTTTCTTAAATTCTCAGATATCTTTTACAGTGGGGTGCTGAAACTGA  143

seq1  AGAATATGCAAGCAGCTGGATGCGCTTTTTTTGTTTTAGTGTACTTGGAC  198
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGAATATGCAAGCAGCTGGATGCGCTTTTATTGTTTTAGTGTACTTGGAC  193

seq1  TTTTAAAATTTGCCATTTATCTATCCATTTGCCTTGCTTTTATTATACCA  248
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTAAAATTTGCCATTTATCTATCCATTTGCATTGCTTTTATTATACCA  243

seq1  TATGTCATTCACAAATGCTGAGCCTACTGCTAAAAGCTTGTGTCTGGAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATTCACAAATGCTGAGCCTACTGCTAAAAGCTTGTGTCTGGAAT  293

seq1  CCTCTGCTAAGAGATTAAATTAAGCCATGCAGAAAATCATGTGTTTTAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTAAGAGATTAAATTAAGCCATGCAGAAAATCATGTGTTTTAAA  343

seq1  AGGACAGTATTTTCGTCAACAATTTTGCTTTTATAGTCTGGTTAATAGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTATTTTCGTCAACAATTTTGCTTTTATAGTCTGGTTAATAGCT  393

seq1  GACTGAGTTTCTCCCATGGCCATGAAAATGCAACAAGCAATGTTGTAGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGTTTCTCCCATGGCCATGAAAATGCAACAAGCAATGTTGTAGGG  443

seq1  AAAGAAATATCAGAAATTAGGAAATCTCTGCTTGTTGGGAAATGTTCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATATCAGAAATTAGGAAATCTCTGCTTGTTGGGAAATGTTCTTT  493

seq1  GGTTACTATGTTTTAAGAAAACAAGTCTTTCAACAGCTCTACTCACTTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACTATGTTTTAAGAAAACAAGTCTTTCAACAGCTCTACTCACTTCA  543

seq1  AATAGATACAATTCTCTCATCCACTCTTCCCCTTAAAATTAGCATAATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATACAATTCTCTCATCCACTCTTCCCCTTAAAATTAGCATAATTT  593

seq1  GCATATACATAGTGTTAGTGTGTTTAAGTGCTGAGCATAATAGCTTTTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATACATAGTGTTAGTGTGTTTAAGTGCTGAGCATAATAGCTTTTGA  643

seq1  TATATACACTCATTCCCCACACACAATCCTCTACACATCGTTCTGAAAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACACTCATTCCCCACACACAATCCTCTACACATCGTTCTGAAAGG  693

seq1  TCTTGTACACCATCTTAGATGACTCCTACCTCGGGCTGGAGGTCTGGTGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTACACCATCTTAGATGACTCCTACCTCGGGCTGGAGGTCTGGTGG  743

seq1  ACTTTATATACATCTAACCTATGAATTC  776
      ||||||||||||||||||||||||||||
seq2  ACTTTATATACATCTAACCTATGAATTC  771