BAC Information

Click to search

BAC

Clone NameB6Ng01-068E18
Chromosome14 (Build37)
Map Location 13,213,698 - 13,214,808
singlet/doubletsinglet
Overlap geneCadps
Upstream geneLOC667059, LOC100041996, Ptprg, LOC100042441, 3830406C13Rik, EG667072, Fezf2
Downstream geneEG432822, LOC100042022, LOC100042026, EG328354, Synpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068E18.bB6Ng01-068E18.g
ACCDH886924DH886925
length1,1971,104
definitionDH886924|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E18, 5' end.DH886925|Mus musculus domesticus DNA, BAC clone: B6Ng01-068E18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattactcct
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
tttatcttattgatggtgtcttttgccttacagaatgctttgcagtttca
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcagcaatttttcccctgtgccagtatcttagaggcttttccccac
tttctcctctataagtttcactgtctctggttttatgaggagctccttga
tccacttagattcgaccttagtacgaggagataggaatggatcaattcgc
attcttctacaggataaccaccagttgtgcccgcaccatttgttgaaaat
gctgtctttttttccactggatggttttggctcccttgtcaaagatcaag
tgcccagaggagtgtgggctcatttctgggtcttcaattctatttaattg
gtctacttgtctgtcactataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaaaagtttttgctatcctaggttttttgttattcctgat
gaattttcagattgctctttctaattctttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagagacttgaagttcttatcat
acagattctttcacttctttagttagtcacgccaaatatttatatatgac
tatgagaagggtgttgtttccctaatttcttctcagcctgttattctttg
tgtagagaaaggccattgagtcctttggagtaattttatatcccagctac
ttcaccaaagctgtttatcagtttaggagttctctcggtggatttttaag
gtcactaatatactaatcataccactctgccaaatgaattggacctcctc
cttcgcaaatgatcccttgaattcctctttgtgtgaatgtgcacggc
gaattccagaattgagatgagaattaagacttatagccaggcatgccagt
gcttactatgtatcccagtatcctagcatcaggaggcagaggcaggagga
tggctgcaagaaagagcatcctggtctagcaagtacagggcaatcagaag
tacaagaagagactctgtctttaaaaaaattaaaaattggagctggagag
atggctcagtaattaagagcactgactgctcttccagaggacctgtgttc
aattcccagcaatcacatgacagctcacaactgtctgtaatcacaaaatc
tggtaccctcacaggcacacatgcaggccaaacaccaatgcacataaaat
aaaaataaatccgttttttaaaaaattaaaaatagcaaaatctgtgtggc
agctacagtggcagcacctcagcagacaccactccaccatcagtctgtat
tactcaatgggattagccagctctgagagaaagcctggttccatgagctc
agcagacaccactccaccatcagtctgtattactcaatgggattagccag
ctctgaggaaagcctggttccatgagctcagcagacaccactctaccatc
agtctgtattactcaatgggattagccagctctaaggaaagcctggttcc
atgagctttaccttctcaggcatcaattattcatcttacctgtcaactct
tcagttttttagggtatgaatttcctcttcagttttttagggtatgaatt
tcccatccatccatccaaccacaggagagacctagagagagatgttggag
tctcttgtccttgtagagtatagacctagagagagatggtggagtctctt
gtccttgtggagtggagtgaggggaactaacaatacactttaatatttga
gacattcaaaactcaaaattaagtaacaaaatccctgatgaatatcatgt
ttttcatgatgttagtatgtgaatctggtctctcaggaccctgatcctgg
ccatacagcccatgttgtagtgggtccaggctccatgtgaattgcctacc
gaagtcattatgcttcaggtcactattgttgcttgagagattctgagtac
cagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_13213698_13214808
seq2: B6Ng01-068E18.g_68_1171 (reverse)

seq1  ACTGGTACTCAG-ATCTCTCAAGCCACATATGCTGCCCTGAAGCATACTG  49
      |||||||||||| ||||||||||| ||| ||  || ||||||||||| ||
seq2  ACTGGTACTCAGAATCTCTCAAGCAACA-ATAGTGACCTGAAGCATAATG  49

seq1  ACTTCTGTAGGGCAATTCTACCATGTAGCCTGTACCCACTACAACATGGG  99
      ||||| ||| ||||||||   |||| |||||| |||||||||||||||||
seq2  ACTTCGGTA-GGCAATTC--ACATGGAGCCTGGACCCACTACAACATGGG  96

seq1  CTGTTATGGCCAGGATCAGGGTCCTGAGAGACCAGAATCACATACTAACA  149
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTG-TATGGCCAGGATCAGGGTCCTGAGAGACCAGATTCACATACTAACA  145

seq1  TCATTGAAAAACATGATATTCATCAAGGATTTTGTTACTTTAATTTTGAG  199
      ||| ||||||||||||||||||||| |||||||||||| |||||||||||
seq2  TCA-TGAAAAACATGATATTCATCAGGGATTTTGTTAC-TTAATTTTGAG  193

seq1  TTTTTGAATGTCTCAAATATTAAAGTGTATTGTTAGTTCCCCTCACTCCA  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTGAATGTCTCAAATATTAAAGTGTATTGTTAGTTCCCCTCACTCCA  242

seq1  CTCCACAAGGACAAGAGACTCCACCATCTCTCTCTAGGTCTATACTCTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAGGACAAGAGACTCCACCATCTCTCTCTAGGTCTATACTCTAC  292

seq1  AAGGACAAGAGACTCCAACATCTCTCTCTAGGTCTCTCCTGTGGTTGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAGAGACTCCAACATCTCTCTCTAGGTCTCTCCTGTGGTTGGAT  342

seq1  GGATGGATGGGAAATTCATACCCTAAAAAACTGAAGAGGAAATTCATACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGATGGGAAATTCATACCCTAAAAAACTGAAGAGGAAATTCATACC  392

seq1  CTAAAAAACTGAAGAGTTGACAGGTAAGATGAATAATTGATGCCTGAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAACTGAAGAGTTGACAGGTAAGATGAATAATTGATGCCTGAGAA  442

seq1  GGTAAAGCTCATGGAACCAGGCTTTCCTTAGAGCTGGCTAATCCCATTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGCTCATGGAACCAGGCTTTCCTTAGAGCTGGCTAATCCCATTGA  492

seq1  GTAATACAGACTGATGGTAGAGTGGTGTCTGCTGAGCTCATGGAACCAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATACAGACTGATGGTAGAGTGGTGTCTGCTGAGCTCATGGAACCAGG  542

seq1  CTTTCCTCAGAGCTGGCTAATCCCATTGAGTAATACAGACTGATGGTGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCAGAGCTGGCTAATCCCATTGAGTAATACAGACTGATGGTGGA  592

seq1  GTGGTGTCTGCTGAGCTCATGGAACCAGGCTTTCTCTCAGAGCTGGCTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTCTGCTGAGCTCATGGAACCAGGCTTTCTCTCAGAGCTGGCTAA  642

seq1  TCCCATTGAGTAATACAGACTGATGGTGGAGTGGTGTCTGCTGAGGTGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTGAGTAATACAGACTGATGGTGGAGTGGTGTCTGCTGAGGTGCT  692

seq1  GCCACTGTAGCTGCCACACAGATTTTGCTATTTTTAATTTTTTAAAAAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTAGCTGCCACACAGATTTTGCTATTTTTAATTTTTTAAAAAAC  742

seq1  GGATTTATTTTTATTTTATGTGCATTGGTGTTTGGCCTGCATGTGTGCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTATTTTTATTTTATGTGCATTGGTGTTTGGCCTGCATGTGTGCCT  792

seq1  GTGAGGGTACCAGATTTTGTGATTACAGACAGTTGTGAGCTGTCATGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGTACCAGATTTTGTGATTACAGACAGTTGTGAGCTGTCATGTGA  842

seq1  TTGCTGGGAATTGAACACAGGTCCTCTGGAAGAGCAGTCAGTGCTCTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGGAATTGAACACAGGTCCTCTGGAAGAGCAGTCAGTGCTCTTAA  892

seq1  TTACTGAGCCATCTCTCCAGCTCCAATTTTTAATTTTTTTAAAGACAGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGCCATCTCTCCAGCTCCAATTTTTAATTTTTTTAAAGACAGAG  942

seq1  TCTCTTCTTGTACTTCTGATTGCCCTGTACTTGCTAGACCAGGATGCTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTGTACTTCTGATTGCCCTGTACTTGCTAGACCAGGATGCTCT  992

seq1  TTCTTGCAGCCATCCTCCTGCCTCTGCCTCCTGATGCTAGGATACTGGGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCAGCCATCCTCCTGCCTCTGCCTCCTGATGCTAGGATACTGGGA  1042

seq1  TACATAGTAAGCACTGGCATGCCTGGCTATAAGTCTTAATTCTCATCTCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTAAGCACTGGCATGCCTGGCTATAAGTCTTAATTCTCATCTCA  1092

seq1  ATTCTGGAATTC  1111
      ||||||||||||
seq2  ATTCTGGAATTC  1104