BAC Information

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BAC

Clone NameB6Ng01-068F01
Chromosome14 (Build37)
Map Location 87,172,529 - 87,303,881
singlet/doubletdoublet
Overlap geneDiap3
Upstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311
Downstream geneEG665324, Tdrd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068F01.bB6Ng01-068F01.g
ACCDH886937DH886938
length1,1491,056
definitionDH886937|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F01, 5' end.DH886938|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,172,529 - 87,173,709)(87,303,365 - 87,303,881)
sequence
gaattccatcaaccctcggggttaccagagcaatgtcaaagcacacatgc
aaatgcgggcgatggtggtggcagagagcagaaggacagaacatcagaac
tagaccaggaatttccaaacaacaaaaaaaattccagctctgtcctaaat
cagccattttttaattagagccatctcaacagtgtgtctgtgtcctgccc
actaaagaggacagggcttctcagacgcagtgtggagcattgcttatata
gaccaatggcacggtgagtttagatggaatgtacttcagtgtctgcagtc
atcataaatcatatttttttctcctagaaatgagttattttttaaagcat
aaaactagtttctaaaagcgaccaggtgtatggtacagtgcctattatac
agaagctgggcctgccaaaacttaccatagaaaagaaaacttaccatttt
catgcaggactctatgaatgaatatatttctaattacacacactcacaca
cacccctgatatataattctgctgatagataaaatatgtatattgccctc
tgacaagctttcatatgattcatgaaagttatcttttacaagtaagatgg
taaactcagagatgattttaagaatttaaaggatagcattccttaagcta
gttctttcctaagaactttgttcactgtttttatttcccccttttggagc
cacactctctttatagacaactcttgacatgtgaccatggcagagtacaa
aaccccactccttacagtttataaacagatgcagacatagaactatgcgt
cagctgctttgccatctgctcctgccgcacagttttagatgagagctaaa
ccttggaggtgtgatcaaaaatggtgggtgagaatcaagtatttagaggt
tgtcaatttacacatacatttaattctgaagcatttcaatgtttactgta
aagtacactaaatattttagacattttatagtactacttacctaatcttt
aaaatttacactcaaattcagtatattttgctatacataggtcatgtaat
attaatattagtagttatcagtgaagtaacatttaataatgaagattgct
ttttattagatttatgtgattgcaataaagcaggaaaaattagagaatt
gaattcctcattcttctcgccatgtgttatttatttatttattttttaaa
gtttggaattttaaactttaataagttttcatttttataaacacattcat
aaaacaacttacagataaaaatcacataacacacacacagcataagtaat
cagagctaagctctatgcatctcagtgaccttctatacacttaagttagc
aatttagaatggatgctttgtacctttccattagattttacacttttaca
tcttccccatttgctgtgacaaaacccttgacaacagcacatgttcattg
tgaatcacagatagaaaatgtatctgccactgtggaggggacgccagggc
agggacgcatgaggcagcaagagctaagctcttactcactctgttctcca
gaatgatgatactgggttagtgtgggctgagaggaggtgggaaaggcatg
cttgtttcttccttttgttcactttaagaccacaccccatagtctaatgt
ggctgatacttacattgcatcctccatcaagaagctagctagcatagaga
ggggtgaatgacagggaggaggactggggaaggcatgtttctttctttct
acttttcagtgtaggacctggcatcataggttaatacttctcatctttag
tgggtttgttactgtatcagataagccaggctagaagctgccccaataga
caaatttctgtccaggtgattccagaccagctgtgctcaacctagtgatt
gggacccacttggggggtcaaacaggcctttgtcagccagaggtcaccta
caagcatcacaaaacaaagatgtttccattatgatttttaacagtagcaa
acatatagttaagtagcaatgaaataattttatggttgggagtcaccaac
cacatgtgtattaaagcattacccaaccactctgaattaaagcattacag
cattaggatgcttgagaaccctctctagatcccatgaagtgataacaatt
tgattgggatagtgagtgtgggggactaacactctagcaggaacttgcac
attcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87172529_87173709
seq2: B6Ng01-068F01.b_45_1193

seq1  GAATTCCATCAACCCTCGGGGTTACCAGAGCAATGTCAAAGCACACATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAACCCTCGGGGTTACCAGAGCAATGTCAAAGCACACATGC  50

seq1  AAATGCGGGCGATGGTGGTGGCAGAGAGCAGAAGGACAGAACATCAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCGGGCGATGGTGGTGGCAGAGAGCAGAAGGACAGAACATCAGAAC  100

seq1  TAGACCAGGAATTTCCAAACAACAAAAAAAATTCCAGCTCTGTCCTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAGGAATTTCCAAACAACAAAAAAAATTCCAGCTCTGTCCTAAAT  150

seq1  CAGCCATTTTTTAATTAGAGCCATCTCAACAGTGTGTCTGTGTCCTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATTTTTTAATTAGAGCCATCTCAACAGTGTGTCTGTGTCCTGCCC  200

seq1  ACTAAAGAGGACAGGGCTTCTCAGACGCAGTGTGGAGCATTGCTTATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGAGGACAGGGCTTCTCAGACGCAGTGTGGAGCATTGCTTATATA  250

seq1  GACCAATGGCACGGTGAGTTTAGATGGAATGTACTTCAGTGTCTGCAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATGGCACGGTGAGTTTAGATGGAATGTACTTCAGTGTCTGCAGTC  300

seq1  ATCATAAATCATATTTTTTTCTCCTAGAAATGAGTTATTTTTTAAAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAATCATATTTTTTTCTCCTAGAAATGAGTTATTTTTTAAAGCAT  350

seq1  AAAACTAGTTTCTAAAAGCGACCAGGTGTATGGTACAGTGCCTATTATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAGTTTCTAAAAGCGACCAGGTGTATGGTACAGTGCCTATTATAC  400

seq1  AGAAGCTGGGCCTGCCAAAACTTACCATAGAAAAGAAAACTTACCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGGGCCTGCCAAAACTTACCATAGAAAAGAAAACTTACCATTTT  450

seq1  CATGCAGGACTCTATGAATGAATATATTTCTAATTACACACACTCACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGACTCTATGAATGAATATATTTCTAATTACACACACTCACACA  500

seq1  CACCCCTGATATATAATTCTGCTGATAGATAAAATATGTATATTGCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTGATATATAATTCTGCTGATAGATAAAATATGTATATTGCCCTC  550

seq1  TGACAAGCTTTCATATGATTCATGAAAGTTATCTTTTACAAGTAAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGCTTTCATATGATTCATGAAAGTTATCTTTTACAAGTAAGATGG  600

seq1  TAAACTCAGAGATGATTTTAAGAATTTAAAGGATAGCATTCCTTAAGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAGAGATGATTTTAAGAATTTAAAGGATAGCATTCCTTAAGCTA  650

seq1  GTTCTTTCCTAAGAACTTTGTTCACTGTTTTTATTTCCCCCTTTTGGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCCTAAGAACTTTGTTCACTGTTTTTATTTCCCCCTTTTGGAGC  700

seq1  CACACTCTCTTTATAGACAACTCTTGACATGTGACCATGGCAGAGTACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTCTTTATAGACAACTCTTGACATGTGACCATGGCAGAGTACAA  750

seq1  AACCCCACTCCTTACAGTTTATAAACAGATGCAGACATAGAACTATGCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCACTCCTTACAGTTTATAAACAGATGCAGACATAGAACTATGCGT  800

seq1  CAGCTGCTTTGCCATCTGCTCCTGCCGCACAGTTTTAGATGAGAGCTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTTTGCCATCTGCTCCTGCCGCACAGTTTTAGATGAGAGCTAAA  850

seq1  CCTTGGAGGTGTGATCAAAAATGGTGGGTGAGAATCCAAGTATTTAGAGG  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTTGGAGGTGTGATCAAAAATGGTGGGTGAGAAT-CAAGTATTTAGAGG  899

seq1  TTGTCAATTTACACATACATTTAATTCTGAAGCATTTCAATGTTTACTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAATTTACACATACATTTAATTCTGAAGCATTTCAATGTTTACTGT  949

seq1  AAAGTACACTAAATATTTTAGACAATTTAATAAGTAACTACTTACCTAAT  1000
      |||||||||||||||||||||||| ||||   ||| ||||||||||||||
seq2  AAAGTACACTAAATATTTTAGACATTTTA--TAGT-ACTACTTACCTAAT  996

seq1  CTTTAAAAATTTACACTCAAATTCAAGTATATTTTTGCTATACATAAGTT  1050
      |||| ||||||||||||||||||| |||||| ||||||||||||| || |
seq2  CTTT-AAAATTTACACTCAAATTC-AGTATA-TTTTGCTATACAT-AGGT  1042

seq1  CATGTAATATTAAATATTTAAGGTAGTTATCAGTGAAAGTAAACATTTAA  1100
      ||||||||||| ||||||    ||||||||||||| |||| |||||||||
seq2  CATGTAATATT-AATATT---AGTAGTTATCAGTG-AAGT-AACATTTAA  1086

seq1  ATAAATGAAAGAATTTGCTTTTTTTTTAAATTTAGTATTATGTTTGATTG  1150
         |||| ||||  |||| ||||| ||| |||||        | ||||||
seq2  --TAATG-AAGA--TTGC-TTTTTATTAGATTTA--------TGTGATTG  1122

seq1  CAAATAAAAAGCAGGAAAAAAATAGAGAATT  1181
      ||   | |||||||| ||||| |||||||||
seq2  CA---ATAAAGCAGG-AAAAATTAGAGAATT  1149

seq1: chr14_87303365_87303881
seq2: B6Ng01-068F01.g_611_1123 (reverse)

seq1  TGGAATGTGCAAGTTCCTGCTTGAGTGTTAGTCCCCACCACTCACTATCA  50
      ||||||||||||||||||||| ||||||||||||||  ||||||||||| 
seq2  TGGAATGTGCAAGTTCCTGCTAGAGTGTTAGTCCCCCACACTCACTATCC  50

seq1  CAATACAAATTGTTATCAACTTCATGGGATCTAGAAGAGTGGTTCTCAAG  100
      |||| |||||||||||| |||||||||||||||| |||| ||||||||||
seq2  CAAT-CAAATTGTTATC-ACTTCATGGGATCTAG-AGAG-GGTTCTCAAG  96

seq1  CATCCTAATGCTGTAATGCTTTAATTCAGAGTGGTTGGGTAATGCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAATGCTGTAATGCTTTAATTCAGAGTGGTTGGGTAATGCTTTAA  146

seq1  TACACATGTGGTTGGTGACTCCCAACCATAAAATTATTTTCATTGCTACT  200
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TACACATGTGGTTGGTGACTCCCAACCATAAAATTA-TTTCATTGCTACT  195

seq1  TAACTATATGTTTGCTACTGTTAAAAATCATAATGGAAACATCTTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATATGTTTGCTACTGTTAAAAATCATAATGGAAACATCTTTGTTT  245

seq1  TGTGATGCTTGTAGGTGACCTCTGGCTGACAAAGGCCTGTTTGA-CCCCC  299
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTGATGCTTGTAGGTGACCTCTGGCTGACAAAGGCCTGTTTGACCCCCC  295

seq1  AAGTGGGTCCCAATCACTAGGTTGAGCACAGCTGGTCTGGAATCACCTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGTCCCAATCACTAGGTTGAGCACAGCTGGTCTGGAATCACCTGG  345

seq1  ACAGAAATTTGTCTATTGGGGCAGCTTCTAGCCTGGCTTATCTGATACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATTTGTCTATTGGGGCAGCTTCTAGCCTGGCTTATCTGATACAG  395

seq1  TAACAAACCCACTAAAGATGAGAAGTATTAACCTATGATGCCAGGTCCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAACCCACTAAAGATGAGAAGTATTAACCTATGATGCCAGGTCCTA  445

seq1  CACTGAAAAGTAGAAAGAAAGAAACATGCCTTCCCCAGTCCTCCTCCCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAAAGTAGAAAGAAAGAAACATGCCTTCCCCAGTCCTCCTCCCTG  495

seq1  TCATTCACCCCTCTCTAT  517
      ||||||||||||||||||
seq2  TCATTCACCCCTCTCTAT  513