BAC Information

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BAC

Clone NameB6Ng01-068H05
Chromosome14 (Build37)
Map Location 53,418,997 - 53,419,704
singlet/doubletsinglet
Overlap genenone
Upstream geneAY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481
Downstream geneLOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068H05.bB6Ng01-068H05.g
ACCDH887035DH887036
length1,205708
definitionDH887035|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H05, 5' end.DH887036|Mus musculus domesticus DNA, BAC clone: B6Ng01-068H05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattgtttgttcaggtctgagccgcattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatatattggatattagtc
ccctatccaatttgggataggtaaagatcctttcccaatctgttggtggc
ctttttgtcttattgatggtgtcttttgctttgcagaagctttgcaattt
tatgaggtcccatttatcgattcttgatcttacagcacaagccattgctg
ttttattcaggaatttttcccctgtacccatatcttcgaggcttttcccc
actttctcctctataagtttcagtgtctttggttttatgtagagttcctt
aatccacttagacttgaccttagtacaaggagatagaaatggatcaattc
gcattcttctacatgataaccgccagttatgccagcaccatttgttgaaa
atgctgtcttttttccactggatggtttttgctcccttgtcaaagatcaa
gtgaccataggtgtgtgggttgatctctgggtcttcaattctgttccatt
ggtctacttgtctgtcactttaccagtaccattcagttttgataacaatt
gctctgtagtacagttttaggtcgggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctcggtttttttttattccaga
tgaatctgctgattgccctttctaattcgttgaagaattgagttggaatt
ttgatgggtattgcattgaatctgtaaattgcttttggcaagatagccat
ttttacaatgtttgatcctgccaatcgatgagcatgggagatcttttcca
tctttctgagatctttaatttcttttctttatagacttgaagttcttatc
atacagatctttcacttcccttagttagagtcacgccaaggtatttatat
tatttgtgactattgaagaaggtgttgtttcctaatttctttctcagctg
ttatcctttgtatacagaaagccattgacttggtgagtattatatcagct
acttattgagctgttatcagcttagagttccctggtgaatttaagtcact
aatatcatccatacatctggcaaaaggattgactctctttcaagtttatc
gtgatcctttggtgctaatgcctggccagtacctcagagcaatggtgata
gtgat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacgactgaatgtttcttgttcctctagaaatgcat
ttaggagaatgtggagaagcctcatcatccagggtatatataatgtctgt
gtcaccagaagccccaagggcaccgggtcatgaatttattatttatctaa
tgtcaggtctggcctgaattgcactctctccaaaatgtttacattaaagc
taagacactaagaacctcagaatgtgactatattcaaagacaggaacttt
aaaaattatcaaggcaaaatgaggccaactctaactaaatgaggctgatg
ttcatataagaatagatgaacatcctcaaaggaaaagcatgtgaggactt
agggggaaggggtcatctacatacaagtcaagcgggaggccttggagaaa
actacagtcaatattttgatcttggaatttcagcctggagagagagagag
agagagagagagagagagagagagagagagatagagagagagagagagag
agagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53418997_53419704
seq2: B6Ng01-068H05.g_66_773 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCT  50

seq1  CTCTCTCTCTCTCTCTCTCTCCAGGCTGAAATTCCAAGATCAAAATATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCCAGGCTGAAATTCCAAGATCAAAATATTG  100

seq1  ACTGTAGTTTTCTCCAAGGCCTCCCGCTTGACTTGTATGTAGATGACCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGTTTTCTCCAAGGCCTCCCGCTTGACTTGTATGTAGATGACCCC  150

seq1  TTCCCCCTAAGTCCTCACATGCTTTTCCTTTGAGGATGTTCATCTATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTAAGTCCTCACATGCTTTTCCTTTGAGGATGTTCATCTATTCT  200

seq1  TATATGAACATCAGCCTCATTTAGTTAGAGTTGGCCTCATTTTGCCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAACATCAGCCTCATTTAGTTAGAGTTGGCCTCATTTTGCCTTGA  250

seq1  TAATTTTTAAAGTTCCTGTCTTTGAATATAGTCACATTCTGAGGTTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTAAAGTTCCTGTCTTTGAATATAGTCACATTCTGAGGTTCTTA  300

seq1  GTGTCTTAGCTTTAATGTAAACATTTTGGAGAGAGTGCAATTCAGGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTAGCTTTAATGTAAACATTTTGGAGAGAGTGCAATTCAGGCCAG  350

seq1  ACCTGACATTAGATAAATAATAAATTCATGACCCGGTGCCCTTGGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACATTAGATAAATAATAAATTCATGACCCGGTGCCCTTGGGGCTT  400

seq1  CTGGTGACACAGACATTATATATACCCTGGATGATGAGGCTTCTCCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACACAGACATTATATATACCCTGGATGATGAGGCTTCTCCACAT  450

seq1  TCTCCTAAATGCATTTCTAGAGGAACAAGAAACATTCAGTCGTACAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAAATGCATTTCTAGAGGAACAAGAAACATTCAGTCGTACAAGCC  500

seq1  TGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGC  550

seq1  CAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGT  600

seq1  GAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGG  650

seq1  ATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGT  700

seq1  GAGAATTC  708
      ||||||||
seq2  GAGAATTC  708