BAC Information

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BAC

Clone NameB6Ng01-068J12
Chromosome14 (Build37)
Map Location 115,972,676 - 115,973,741
singlet/doubletsinglet
Overlap geneGpc5
Upstream geneLOC100043521
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068J12.bB6Ng01-068J12.g
ACCDH887137DH887138
length1,2291,060
definitionDH887137|Mus musculus domesticus DNA, BAC clone: B6Ng01-068J12, 5' end.DH887138|Mus musculus domesticus DNA, BAC clone: B6Ng01-068J12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcctttctgttttgtatccccttgatctcttttcgatgtctta
ttgctctgctagaacttcaagtactatattgaatagatagagagagagac
aatcttgtctctgattttactggaattgctttaagcttctctctaattag
tttaatgttggctattggcttgttgtatatgctttgatctctttaatact
tttaacatgaatgggtgttggattttgtcaaaggcttttcagtgcttaat
aagatgatcatgtgacttttttctttcagtttgtttatatgatagatttc
aaggttgaattttccagtattgagacatgcctgcatccctgggatgaagc
ctgcttgatcatgatagatgatgtttttgatacgttcctggattcagtct
gggagtattttattaaatatttttggatcaagagaaatgggtctcaaggt
atctttcattgtttagtctttgtatggtttagataccagtgtgactgtgg
cctcatagaatgagtctggcagtgttccttctggttcaattttgtggaat
agtttgaggagtattggtgttggctcttctttgacagtctggtaaaattc
tgtgttaaaaccatctggtcctgggctttttggagtgtgctgggtttggg
aggcttttaataactgcttccttaagggctatagggctgtttaaattgtt
ttcctaatcttgattgtttatttgaatacagtctctctgtcttttggtta
gtttggctaagggtttgtcgatcttgttgactttctcaaagaaccagatc
ttggttttgttgattctttgtatgttttcttgtttctaattgattgcagc
ctgcattttgattatttcctgccttatactcctatgtgatgtctttgttt
cttcttctttttttttcctggagcttttcatgtgtaatttttaaattatt
gatatgagaactttctattttttatgcaggcaccatgctctggacaattc
ctcttatcactgctttcattatgcccttataaatcttcatggattcagaa
agtctttatttatccttacttcttcctgacctgatatacattgaataaag
aagtgccagttcctgagtagtaagcttttggggttgttgttgtgagatca
ctttaagcccagaatctgagaaaatatgcatattcacaatttcgtatcct
tcgagcgattgggagaacacaatgctacg
gaattcttatctacagctatggagtgtgaaatgcaggatattaagacctt
aagaagtgattatttaaatgatttaattatatcaaatgtttttccactga
tgttataattatgttttaatgaaccaatcttaaaataaaaacaagtactg
tctaaatgtttaacatgaaaaccctatttcatttgtagctcacactagtt
ttctagttttcaaatgtaatttttgttaagtaatttagactaaattttat
gttgttaaataaatcagtatatgacttagaaatcatgtctttaattccca
gggtttttttccctatcaacacagtaacacaattgtcaacaaaatcccct
acaattattacttctatgatgatttcagcatatcagaattttctatcaaa
taaattctaaatatacagttttcataattgtaaaaatatgcctaataaca
aatgcaattggaaatacataacactttgatcaatgtggaggattattaaa
caatagctttggcccatactctttctgtgctcaaccttttcaaacaaatg
cacttattatttgcattaattattaactaatattttagtagtatagaaca
tgcttcaaaaatttacattctcccctacttccatcacttcgaagaataga
actatgtactgcttgactctggatatttttcaagtgtcatacctttgcaa
agggactatcttaagtgtggtgagtttggcataactgggaaatgaacaga
agttgagtaattccaccaaagtcggaggaaaagtttcccaataagaaatc
attacagcaatactagattgcccaatatacgtcattatcaaccatttctt
tcaagcaggtattacttccgctataaacaagtcataatattgtttcaaca
taatgttaacatgttctgattaacatggtaacatcacttttctacaatga
cctctggtattaactctatttcaattggatgagcacatttaagttctgaa
ctgtttatgtatttgatgagatggagaaaatctactataaagtctaaaat
gtgatctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_115972676_115973741
seq2: B6Ng01-068J12.g_68_1120 (reverse)

seq1  CACATTTTTAGACTTTATAGTAAGATTTTTCCTCCATCTTCATCAAATAC  50
      |||| |||||||||||||||| |||||||  ||||||| |||||||||||
seq2  CACA-TTTTAGACTTTATAGT-AGATTTT--CTCCATC-TCATCAAATAC  45

seq1  ATATACAGTTCCAAGAACTTAAAATGTGCCTCATTCCAATTGAAATTAGA  100
      ||| |||||||  ||||||| ||||||| |||| ||||||||||| ||||
seq2  ATAAACAGTTC--AGAACTT-AAATGTG-CTCA-TCCAATTGAAA-TAGA  89

seq1  GTTAATTACCAGAGGTCATTGTAGAAAAGTGATGTTACCATGTTAATCAG  150
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAA-TACCAGAGGTCATTGTAGAAAAGTGATGTTACCATGTTAATCAG  138

seq1  AACATGTTAACATTATGTTTGAAACAATATTATGACTTGTTTATAGCGGA  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACATGTTAACATTATG-TTGAAACAATATTATGACTTGTTTATAGCGGA  187

seq1  AGTAATACCTGCTTGAAAGAAATGGTTGATAATGACGTATATTGGGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATACCTGCTTGAAAGAAATGGTTGATAATGACGTATATTGGGCAAT  237

seq1  CTAGTATTGCTGTAATGATTTCTTATTGGGAAACTTTTCCTCCGACTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTATTGCTGTAATGATTTCTTATTGGGAAACTTTTCCTCCGACTTTG  287

seq1  GTGGAATTACTCAACTTCTGTTCATTTCCCAGTTATGCCAAACTCACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTACTCAACTTCTGTTCATTTCCCAGTTATGCCAAACTCACCAC  337

seq1  ACTTAAGATAGTCCCTTTGCAAAGGTATGACACTTGAAAAATATCCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGATAGTCCCTTTGCAAAGGTATGACACTTGAAAAATATCCAGAG  387

seq1  TCAAGCAGTACATAGTTCTATTCTTCGAAGTGATGGAAGTAGGGGAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCAGTACATAGTTCTATTCTTCGAAGTGATGGAAGTAGGGGAGAAT  437

seq1  GTAAATTTTTGAAGCATGTTCTATACTACTAAAATATTAGTTAATAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTTTTGAAGCATGTTCTATACTACTAAAATATTAGTTAATAATTA  487

seq1  ATGCAAATAATAAGTGCATTTGTTTGAAAAGGTTGAGCACAGAAAGAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATAATAAGTGCATTTGTTTGAAAAGGTTGAGCACAGAAAGAGTA  537

seq1  TGGGCCAAAGCTATTGTTTAATAATCCTCCACATTGATCAAAGTGTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCAAAGCTATTGTTTAATAATCCTCCACATTGATCAAAGTGTTATG  587

seq1  TATTTCCAATTGCATTTGTTATTAGGCATATTTTTACAATTATGAAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAATTGCATTTGTTATTAGGCATATTTTTACAATTATGAAAACT  637

seq1  GTATATTTAGAATTTATTTGATAGAAAATTCTGATATGCTGAAATCATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTTAGAATTTATTTGATAGAAAATTCTGATATGCTGAAATCATCA  687

seq1  TAGAAGTAATAATTGTAGGGGATTTTGTTGACAATTGTGTTACTGTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTAATAATTGTAGGGGATTTTGTTGACAATTGTGTTACTGTGTTG  737

seq1  ATAGGGAAAAAAACCCTGGGAATTAAAGACATGATTTCTAAGTCATATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAAAAAAACCCTGGGAATTAAAGACATGATTTCTAAGTCATATAC  787

seq1  TGATTTATTTAACAACATAAAATTTAGTCTAAATTACTTAACAAAAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATTTAACAACATAAAATTTAGTCTAAATTACTTAACAAAAATTA  837

seq1  CATTTGAAAACTAGAAAACTAGTGTGAGCTACAAATGAAATAGGGTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAAAACTAGAAAACTAGTGTGAGCTACAAATGAAATAGGGTTTTC  887

seq1  ATGTTAAACATTTAGACAGTACTTGTTTTTATTTTAAGATTGGTTCATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAACATTTAGACAGTACTTGTTTTTATTTTAAGATTGGTTCATTA  937

seq1  AAACATAATTATAACATCAGTGGAAAAACATTTGATATAATTAAATCATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAATTATAACATCAGTGGAAAAACATTTGATATAATTAAATCATT  987

seq1  TAAATAATCACTTCTTAAGGTCTTAATATCCTGCATTTCACACTCCATAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATCACTTCTTAAGGTCTTAATATCCTGCATTTCACACTCCATAG  1037

seq1  CTGTAGATAAGAATTC  1066
      ||||||||||||||||
seq2  CTGTAGATAAGAATTC  1053