BAC Information

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BAC

Clone NameB6Ng01-068L10
Chromosome14 (Build37)
Map Location 102,983,166 - 103,122,574
singlet/doubletdoublet
Overlap genenone
Upstream geneTbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567, LOC669278
Downstream geneKctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797, Scel, LOC100043448, Slain1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068L10.bB6Ng01-068L10.g
ACCDH887219DH887220
length1,089569
definitionDH887219|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L10, 5' end.DH887220|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,121,473 - 103,122,574)(102,983,166 - 102,983,739)
sequence
gaattcaaggcttgggacagtctggtatggtcttccaaaggtgatgttat
gcagccccagtggaaataaacatgtctatgcaaagaactgacaggtacat
atatgcattatctgcctcaaatcttttttatacttccctctgttcttctt
gcagatttcatatatgtggatatatataaattaatatgcaaacatatatg
tgaagagtatgaaagcacacacgcgttctcattacttcacagttcctgct
gattttaattctactgacatatctaggagttgactaacacttacactggc
tagctcctgtgggtaatgagcatactgaaggctgttaatgtacttttgat
tctctgtttgttttcctttgatcttttcttactccccgaccccatgcctc
tgtttacagtattcatttgctttggctgttatattatttcccttttctat
gggagtcattaatatgtagttattttaactctctatctgagaatctccac
atctgcatcacggctaaggccagatctttgaccctttgtgtaattttttt
ctttaatgttggacatattgcatctgatgataggagctgaggtaaacagg
ctgttagcaggaaactgtattcacttggctatattgtttatgtttgatgt
ttggctgcaaatactggaggttttttttttttttaaatttctacaatgtc
cttgtttttctgtccactcttgatttaggggattccctaattatagtctc
aaaaagaaaaaccttcgctttgcagatttttcaactgtaaagtacggcta
ttatgtttggaaccctgctgatgtggtaaatgtgagacagggagcatttt
ataatctccaaatgaaacttcagcttttcaagagacttgtgtactcggga
cttttgtgagtcacaagttttcttcacacactgttttatgaattgtagag
cagccctgttcattccaccctcccatcccatctctagatttagtactctc
aacccatgtctctgaagctgtgttctgtaacccccctctcctctcctctg
gtgggagaggctgtagagatcaactggagaattcctccc
ccaactggaggatccatcccacatgcagttaccaaaccccattgtggaag
ccaagaagtgcatgctgacaggagcctgatatatctgtctcctgagaggc
tctgccagagcctgacaaatacagagacagatgctcccagccaaccattg
gactgagcatggggtccccaatggagaagctagagaaaggacccaaggag
caaaaggggtttgcagccccataggaggaacaacaatatcaaccaaccag
acccaccctgtgctcccaggcactaaaccaccaaccaaagagtacacatt
gaggggcccatggttccagtcacatatgtagcagaggatgaccttgttgg
tcatcaatgagaggagaggcccttggtccttcataagagcaggtggagag
gggatggaatagggggatttcagaggggaaaccaggagagggaataacac
ttaaaatgtaaataaagaaaatatccaattaaaaaaaaaaagaatagcat
ttgggagatgcaatgtaacattcaaaacacatagtgacattaatcattca
ttacagccatctatgatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103121473_103122574
seq2: B6Ng01-068L10.b_46_1135 (reverse)

seq1  GGGAGGAATGTCTCCCAGTTGTATCCTCTTACAGCCT-TCTCACCACACA  49
      ||||||||| ||| ||||||| || ||| |||||||| || |||||    
seq2  GGGAGGAAT-TCT-CCAGTTG-AT-CTC-TACAGCCTCTCCCACCA----  41

seq1  GGAGGAGAGGGAGAGGGGGGTTAACAAGAACCACAGCTTCAGAGACATGG  99
       ||||||| ||||||||||||||   |||| |||||||||||||||||||
seq2  -GAGGAGA-GGAGAGGGGGGTTA--CAGAA-CACAGCTTCAGAGACATGG  86

seq1  GTTGAGAGTACTAAATCTAGAGATGGGGATGGGAGGGTGGAATGGAACAG  149
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  GTTGAGAGTACTAAATCTAGAGAT-GGGATGGGAGGGTGGAAT-GAACAG  134

seq1  GGCTGCTCTACAATTCAT-AAACAGTGTGTGAAGAAAACTTGTGACTCAC  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGCTGCTCTACAATTCATAAAACAGTGTGTGAAGAAAACTTGTGACTCAC  184

seq1  -AAAGTCCCGAGTACACAAGTCTCCTGAAAAGCTGAAGTTTCATTTGGAG  247
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAAGTCCCGAGTACACAAGTCTCTTGAAAAGCTGAAGTTTCATTTGGAG  234

seq1  ATTATAAAATGCTCCCTGTCTCACATTTACCACATCAGCAGGGTTCC-AA  296
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTATAAAATGCTCCCTGTCTCACATTTACCACATCAGCAGGGTTCCAAA  284

seq1  CATAATAGCCGTACTTTACAGTTGAAAAATCTGCAAAGCGAAGGTTTTTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGCCGTACTTTACAGTTGAAAAATCTGCAAAGCGAAGGTTTTTC  334

seq1  TTTTTGAGACTATAATTAGGGAATCCCCTAAATCAAGAGTGGACAGAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGACTATAATTAGGGAATCCCCTAAATCAAGAGTGGACAGAAAA  384

seq1  ACAAGGACATTGTAGAAATTTAAAAAAAAAAAAAACCTCCAGTATTTGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGACATTGTAGAAATTTAAAAAAAAAAAAAACCTCCAGTATTTGCA  434

seq1  GCCAAACATCAAACATAAACAATATAGCCAAGTGAATACAGTTTCCTGCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACATCAAACATAAACAATATAGCCAAGTGAATACAGTTTCCTGCT  484

seq1  AACAGCCTGTTTACCTCAGCTCCTATCATCAGATGCAATATGTCCAACAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTGTTTACCTCAGCTCCTATCATCAGATGCAATATGTCCAACAT  534

seq1  TAAAGAAAAAAATTACACAAAGGGTCAAAGATCTGGCCTTAGCCGTGATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAAAATTACACAAAGGGTCAAAGATCTGGCCTTAGCCGTGATG  584

seq1  CAGATGTGGAGATTCTCAGATAGAGAGTTAAAATAACTACATATTAATGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGGAGATTCTCAGATAGAGAGTTAAAATAACTACATATTAATGA  634

seq1  CTCCCATAGAAAAGGGAAATAATATAACAGCCAAAGCAAATGAATACTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATAGAAAAGGGAAATAATATAACAGCCAAAGCAAATGAATACTGT  684

seq1  AAACAGAGGCATGGGGTCGGGGAGTAAGAAAAGATCAAAGGAAAACAAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGCATGGGGTCGGGGAGTAAGAAAAGATCAAAGGAAAACAAAC  734

seq1  AGAGAATCAAAAGTACATTAACAGCCTTCAGTATGCTCATTACCCACAGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATCAAAAGTACATTAACAGCCTTCAGTATGCTCATTACCCACAGG  784

seq1  AGCTAGCCAGTGTAAGTGTTAGTCAACTCCTAGATATGTCAGTAGAATTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCCAGTGTAAGTGTTAGTCAACTCCTAGATATGTCAGTAGAATTA  834

seq1  AAATCAGCAGGAACTGTGAAGTAATGAGAACGCGTGTGTGCTTTCATACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGCAGGAACTGTGAAGTAATGAGAACGCGTGTGTGCTTTCATACT  884

seq1  CTTCACATATATGTTTGCATATTAATTTATATATATCCACATATATGAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATATATGTTTGCATATTAATTTATATATATCCACATATATGAAA  934

seq1  TCTGCAAGAAGAACAGAGGGAAGTATAAAAAAGATTTGAGGCAGATAATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGAAGAACAGAGGGAAGTATAAAAAAGATTTGAGGCAGATAATG  984

seq1  CATATATGTACCTGTCAGTTCTTTGCATAGACATGTTTATTTCCACTGGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGTACCTGTCAGTTCTTTGCATAGACATGTTTATTTCCACTGGG  1034

seq1  GCTGCATAACATCACCTTTGGAAGACCATACCAGACTGTCCCAAGCCTTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATAACATCACCTTTGGAAGACCATACCAGACTGTCCCAAGCCTTG  1084

seq1  AATTCC  1102
      ||||||
seq2  AATTCC  1090

seq1: chr14_102983166_102983739
seq2: B6Ng01-068L10.g_69_642

seq1  AATTCCCAACTGGAGGATCCATCCCACATGCAGTTACCAAACCCCATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCAACTGGAGGATCCATCCCACATGCAGTTACCAAACCCCATTGT  50

seq1  GGAAGCCAAGAAGTGCATGCTGACAGGAGCCTGATATATCTGTCTCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAAGAAGTGCATGCTGACAGGAGCCTGATATATCTGTCTCCTGA  100

seq1  GAGGCTCTGCCAGAGCCTGACAAATACAGAGACAGATGCTCCCAGCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCTGCCAGAGCCTGACAAATACAGAGACAGATGCTCCCAGCCAAC  150

seq1  CATTGGACTGAGCATGGGGTCCCCAATGGAGAAGCTAGAGAAAGGACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGACTGAGCATGGGGTCCCCAATGGAGAAGCTAGAGAAAGGACCCA  200

seq1  AGGAGCAAAAGGGGTTTGCAGCCCCATAGGAGGAACAACAATATCAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAAAAGGGGTTTGCAGCCCCATAGGAGGAACAACAATATCAACCA  250

seq1  ACCAGACCCACCCTGTGCTCCCAGGCACTAAACCACCAACCAAAGAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACCCACCCTGTGCTCCCAGGCACTAAACCACCAACCAAAGAGTAC  300

seq1  ACATTGAGGGGCCCATGGTTCCAGTCACATATGTAGCAGAGGATGACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAGGGGCCCATGGTTCCAGTCACATATGTAGCAGAGGATGACCTT  350

seq1  GTTGGTCATCAATGAGAGGAGAGGCCCTTGGTCCTTCATAAGAGCAGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTCATCAATGAGAGGAGAGGCCCTTGGTCCTTCATAAGAGCAGGTG  400

seq1  GAGAGGGGATGGAATAGGGGGATTTCAGAGGGGAAACCAGGAGAGGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGGATGGAATAGGGGGATTTCAGAGGGGAAACCAGGAGAGGGAAT  450

seq1  AACACTTAAAATGTAAATAAAGAAAATATCCAATTAAAAAAAAAAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTAAAATGTAAATAAAGAAAATATCCAATTAAAAAAAAAAAGAAT  500

seq1  AGCATTTGGGAGATGCAATGTAACATTCAAAACACATAGTGACATTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTGGGAGATGCAATGTAACATTCAAAACACATAGTGACATTAATC  550

seq1  ATTCATTACAGCCATCTATGATGT  574
      ||||||||||||||||||||||||
seq2  ATTCATTACAGCCATCTATGATGT  574