BAC Information

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BAC

Clone NameB6Ng01-069O17
Chromosome14 (Build37)
Map Location 73,448,315 - 73,541,342
singlet/doubletdoublet
Overlap geneCysltr2, LOC100043149
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489
Downstream geneRcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069O17.bB6Ng01-069O17.g
ACCDH888078DH888079
length9281,157
definitionDH888078|Mus musculus domesticus DNA, BAC clone: B6Ng01-069O17, 5' end.DH888079|Mus musculus domesticus DNA, BAC clone: B6Ng01-069O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,448,315 - 73,449,242)(73,540,173 - 73,541,342)
sequence
gaattccccagtgtacctctgaaccaaatcactgaagtatgccttctcag
atggactcttctctcttccaaaagcaaagcttcggagtagaaaaaggtct
tacagaataaaatgaccgaatctatgcaaaataggaaagaatctaaatgg
taaaatctatatgctaaaagaagtgcctcatatagcaatttacaattaca
attttatagaattcgtggtagtgtggataaagtgcacgctttaaaggaaa
aaaataatatctgctcttattttatatatacaactatgagagaaagctaa
aaattatatgcacctcaaaaaggaaggaaataccccaactgacaatcaag
ccttgtggtggtattttctacagtctacaatatttttgtactttttccag
tttaccacataagatggtagaacaaacactgatagttgaacaaattaagc
ttactttccacatgccattcctgtactcatcctcaaagcacagttctcag
taacaaatgaacacaaagggaaacctacctgtgcctctgccttcggtcgc
cctggcgtctgctctgactccaggcttctcgccccatagaatgcagcttg
tttatttaaaacaaaagtgaaacaaacactgttttatgaacagtgtcagc
caatagcaaggcgagaagtcacttgggtcagcaggacctcagctttgtgg
cactgtcatgggtgtgggtgcttgagttctttcttcagaagtcagagaat
ttccagtttgtgactgtcaacctctttcaagtcaccctagaattgccctg
ccgctaatgattggtttttgctggggtttttcttttctttcttttctttc
tttccttcccccccccccccctttccatcgggatcttttgcaggtgtgat
gggcagggagctggggggagggggaggt
gaattcaacagtccttttgttcaaagtaagtggctatattcactcaataa
taaacctcttaagagtatatctaagcccggggtggtggcacacgcacgcc
tttaatctcagcactcgggaggcagaggcaggtggatttctgagttcgag
gccagcctggtctacaaagtgagctccaggacagccagggctacacagag
aaaccctgtctcaaaaatccaaaacgaagaaacaaacaaaacgaacaaac
aagagtatatctaagaagtacagggatacagttgctgcatccccatggta
ccctggatggcatatgatgacgatggaccaagagacctgaaattgaagca
gttgctttaggtgacgcaattatacacacaaaaagtattttgagaccaaa
tggctaaaactgacattgaactcttcgtaccaaccaatccctcagatacg
gttgtaggcatgcaccatcatagataaccccgtttcattttttgatgagt
tcaattcagaggcgtttatggatgtctgtcctagaaggcagagttgtcac
ggagctagggtagcatactgtctgctcatagggtacctgtctagtgatag
gcttggggagtgacccttttcactgctctatgtaaagctggaggaaagag
aaaacatttgaacccctcccccaaaagggcaggcgacgctttagtttctt
cagctctttcttccttgtgcctgaaacagcagggttctgaacaaaatgct
ctttgactaatgattgtacaaatttctggccagtggtgtgctccaaagta
gcctttcccagtattttaagaacaaggacggagattgtgggtggggtgct
aggacgagcagagcagatttcaacagcaggttgggctctgagtattggaa
gatgtttatagtacaatgttgtggtctatttgcaccagcttaacatcagc
ctgtatcagcctgaaacagtgatctcgttcgcatgctttgcttagtatgt
tattcagagacttcagacagaagcccagcagatgggatccgatctcttgc
caaacaccacctgaactttctcacttgggcctgacctaaccatacttgat
atttaaggaatgactgaaataaaatcaaagggcgtttgtggatgtcactc
cggaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73448315_73449242
seq2: B6Ng01-069O17.b_49_976

seq1  GAATTCCCCAGTGTACCTCTGAACCAAATCACTGAAGTATGCCTTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAGTGTACCTCTGAACCAAATCACTGAAGTATGCCTTCTCAG  50

seq1  ATGGACTCTTCTCTCTTCCAAAAGCAAAGCTTCGGAGTAGAAAAAGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTCTTCTCTCTTCCAAAAGCAAAGCTTCGGAGTAGAAAAAGGTCT  100

seq1  TACAGAATAAAATGACCGAATCTATGCAAAATAGGAAAGAATCTAAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATAAAATGACCGAATCTATGCAAAATAGGAAAGAATCTAAATGG  150

seq1  TAAAATCTATATGCTAAAAGAAGTGCCTCATATAGCAATTTACAATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTATATGCTAAAAGAAGTGCCTCATATAGCAATTTACAATTACA  200

seq1  ATTTTATAGAATTCGTGGTAGTGTGGATAAAGTGCACGCTTTAAAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATAGAATTCGTGGTAGTGTGGATAAAGTGCACGCTTTAAAGGAAA  250

seq1  AAAATAATATCTGCTCTTATTTTATATATACAACTATGAGAGAAAGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATATCTGCTCTTATTTTATATATACAACTATGAGAGAAAGCTAA  300

seq1  AAATTATATGCACCTCAAAAAGGAAGGAAATACCCCAACTGACAATCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATGCACCTCAAAAAGGAAGGAAATACCCCAACTGACAATCAAG  350

seq1  CCTTGTGGTGGTATTTTCTACAGTCTACAATATTTTTGTACTTTTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGTGGTATTTTCTACAGTCTACAATATTTTTGTACTTTTTCCAG  400

seq1  TTTACCACATAAGATGGTAGAACAAACACTGATAGTTGAACAAATTAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCACATAAGATGGTAGAACAAACACTGATAGTTGAACAAATTAAGC  450

seq1  TTACTTTCCACATGCCATTCCTGTACTCATCCTCAAAGCACAGTTCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCCACATGCCATTCCTGTACTCATCCTCAAAGCACAGTTCTCAG  500

seq1  TAACAAATGAACACAAAGGGAAACCTACCTGTGCCTCTGCCTTCGGTCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATGAACACAAAGGGAAACCTACCTGTGCCTCTGCCTTCGGTCGC  550

seq1  CCTGGCGTCTGCTCTGACTCCAGGCTTCTCGCCCCATAGAATGCAGCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCGTCTGCTCTGACTCCAGGCTTCTCGCCCCATAGAATGCAGCTTG  600

seq1  TTTATTTAAAACAAAAGTGAAACAAACACTGTTTTATGAACAGTGTCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAAACAAAAGTGAAACAAACACTGTTTTATGAACAGTGTCAGC  650

seq1  CAATAGCAAGGCGAGAAGTCACTTGGGTCAGCAGGACCTCAGCTTTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCAAGGCGAGAAGTCACTTGGGTCAGCAGGACCTCAGCTTTGTGG  700

seq1  CACTGTCATGGGTGTGGGTGCTTGAGTTCTTTCTTCAGAAGTCAGAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCATGGGTGTGGGTGCTTGAGTTCTTTCTTCAGAAGTCAGAGAAT  750

seq1  TTCCAGTTTGTGACTGTCAACCTCTTTCAAGTCACCCTAGAATTGCCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTTGTGACTGTCAACCTCTTTCAAGTCACCCTAGAATTGCCCTG  800

seq1  CCGCTAATGATTGGTTTTTGCTGGGGTTTTTCTTTTCTTTCTTTTCTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTAATGATTGGTTTTTGCTGGGGTTTTTCTTTTCTTTCTTTTCTTTC  850

seq1  TTTCCTT-CCCCCCCCCCCCCTTTCCATCGGGATCTTTTGCAGGATGTGA  899
      ||||||| |||||||||||||||||||||||||||||||||||| |||||
seq2  TTTCCTTCCCCCCCCCCCCCCTTTCCATCGGGATCTTTTGCAGG-TGTGA  899

seq1  TGGGCAGGGAGCTGGGGGGAGGGGGAGGT  928
      |||||||||||||||||||||||||||||
seq2  TGGGCAGGGAGCTGGGGGGAGGGGGAGGT  928

seq1: chr14_73540173_73541342
seq2: B6Ng01-069O17.g_67_1223 (reverse)

seq1  CATTCCTGA-TGACATCCACAAACG-CCTTTGATTTTAATTTCAGTTCAT  48
      |||||| || ||||||||||||||| ||||||||||| ||||||| ||||
seq2  CATTCCGGAGTGACATCCACAAACGCCCTTTGATTTT-ATTTCAG-TCAT  48

seq1  TTCCTAAATGTTTCAAAGTATGGTTAGGTCAGGCCCAAAGTGAGAAAAGT  98
      | | ||||| |    ||||||||||||||||||||| ||||||| |||||
seq2  TCCTTAAATAT---CAAGTATGGTTAGGTCAGGCCC-AAGTGAG-AAAGT  93

seq1  TCAGGTGGTGTTTGCCCAGAGATCTGGGGTCCCAATCCTGCTGGTCTTCT  148
      |||||||||||||| | |||||||  || |||||   ||||||| |||| 
seq2  TCAGGTGGTGTTTGGCAAGAGATC--GGATCCCA--TCTGCTGGGCTTC-  138

seq1  TGTCTGAAGTCTCTAGATATACATACTAAGCAAAGCATGCGAACGAGATC  198
      ||||||||||||||  ||| ||||||||||||||||||||||||||||||
seq2  TGTCTGAAGTCTCTGAATA-ACATACTAAGCAAAGCATGCGAACGAGATC  187

seq1  ACTGTTTCAGGCTTGATACAGGCTGATGTTAAGCTGGTGCAAATTAGACC  248
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  ACTGTTTCAGGC-TGATACAGGCTGATGTTAAGCTGGTGCAAA-TAGACC  235

seq1  ACAACATTGTACTATAAACATC-TACAATACTCAGAGCCCAACCTGCCTG  297
      |||||||||||||||||||||| | ||||||||||||||||||||| |||
seq2  ACAACATTGTACTATAAACATCTTCCAATACTCAGAGCCCAACCTG-CTG  284

seq1  TTGAAATCTGCTCTGCTCGTCCTAGCACCCCACCCACAATCTCCGTCCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCTGCTCTGCTCGTCCTAGCACCCCACCCACAATCTCCGTCCTT  334

seq1  GTTCTTAAAATACTGGGAAAGGCTACTTTGGAGCACACCACTGGCCAGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAAAATACTGGGAAAGGCTACTTTGGAGCACACCACTGGCCAGAA  384

seq1  ATTTGTACAATCATTAGTCAAAGAGCATTTTGTTCAGAACCCTGCTGTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTACAATCATTAGTCAAAGAGCATTTTGTTCAGAACCCTGCTGTTT  434

seq1  CAGGCACAAGGAAGAAAGAGCTGAAGAAACTAAAGCGTCGCCTGCCCTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACAAGGAAGAAAGAGCTGAAGAAACTAAAGCGTCGCCTGCCCTTT  484

seq1  TGGGGGAGGGGTTCAAATGTTTTCTCTTTCCTCCAGCTTTACATAGAGCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGGGTTCAAATGTTTTCTCTTTCCTCCAGCTTTACATAGAGCA  534

seq1  GTGAAAAGGGTCACTCCCCAAGCCTATCACTAGACAGGTACCCTATGAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAGGGTCACTCCCCAAGCCTATCACTAGACAGGTACCCTATGAGC  584

seq1  AGACAGTATGCTACCCTAGCTCCGTGACAACTCTGCCTTCTAGGACAGAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTATGCTACCCTAGCTCCGTGACAACTCTGCCTTCTAGGACAGAC  634

seq1  ATCCATAAACGCCTCTGAATTGAACTCATCAAAAAATGAAACGGGGTTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATAAACGCCTCTGAATTGAACTCATCAAAAAATGAAACGGGGTTAT  684

seq1  CTATGATGGTGCATGCCTACAACCGTATCTGAGGGATTGGTTGGTACGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATGGTGCATGCCTACAACCGTATCTGAGGGATTGGTTGGTACGAA  734

seq1  GAGTTCAATGTCAGTTTTAGCCATTTGGTCTCAAAATACTTTTTGTGTGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAATGTCAGTTTTAGCCATTTGGTCTCAAAATACTTTTTGTGTGT  784

seq1  ATAATTGCGTCACCTAAAGCAACTGCTTCAATTTCAGGTCTCTTGGTCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGCGTCACCTAAAGCAACTGCTTCAATTTCAGGTCTCTTGGTCCA  834

seq1  TCGTCATCATATGCCATCCAGGGTACCATGGGGATGCAGCAACTGTATCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCATCATATGCCATCCAGGGTACCATGGGGATGCAGCAACTGTATCC  884

seq1  CTGTACTTCTTAGATATACTCTTGTTTGTTCGTTTTGTTTGTTTCTTCGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTTCTTAGATATACTCTTGTTTGTTCGTTTTGTTTGTTTCTTCGT  934

seq1  TTTGGATTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAG  984

seq1  CTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCT  1034

seq1  GCCTCCCGAGTGCTGAGATTAAAGGCGTGCGTGTGCCACCACCCCGGGCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCGAGTGCTGAGATTAAAGGCGTGCGTGTGCCACCACCCCGGGCT  1084

seq1  TAGATATACTCTTAAGAGGTTTATTATTGAGTGAATATAGCCACTTACTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATACTCTTAAGAGGTTTATTATTGAGTGAATATAGCCACTTACTT  1134

seq1  TGAACAAAAGGACTGTTGAATTC  1170
      |||||||||||||||||||||||
seq2  TGAACAAAAGGACTGTTGAATTC  1157