BAC Information

Click to search

BAC

Clone NameB6Ng01-069O21
Chromosome14 (Build37)
Map Location 5,666,102 - 5,667,301
singlet/doubletsinglet
Overlap geneLOC100041195
Upstream geneEG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706
Downstream geneLOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069O21.bB6Ng01-069O21.g
ACCDH888084DH888085
length1,1881,130
definitionDH888084|Mus musculus domesticus DNA, BAC clone: B6Ng01-069O21, 5' end.DH888085|Mus musculus domesticus DNA, BAC clone: B6Ng01-069O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctggcaaagacaaaggctgctataggtaactgtctgtcttgctt
gggagcacatgagctgtagaattgccatctctgattttgatcctgcacag
gagactctcgagctctggttcttgctttctgccacttcacacaggagcct
ttagatttttctgttgtaaacctgtgggttgaaacactttttggggtaaa
aaaaaaggtcaaaggaccctttcacagaggttgtgtatcagacaatcctt
tatctcagacacttctattatggcttataacagtacaaaaattatagtac
ccaagtagcaatgaaaataatcttaagtttgggaggtcactgcattaaag
catccacagcatttggtaaattgagaaaccctggtcttgacagaagaact
atttgtatcatgtgaggtcttcttgacccccggggctgagtcaggatcta
tagagagctagttaccagcagacccatgtatagcaagtattccccttgtt
tctcctttccaattcatagtgcctttgcccattccttcgtgatgtttctc
cattaggatggacaggtagggacaactgtagtccacttcttctttttagg
aaacatggatccctcttagtgttgggacttttggaagtagcatgagtgtt
tctggaatttgctgttctctaatttttgctttctgagtgcagctcaccta
gatgtcctgagttcttatctaggtcttcctgagaaccagggtctggtggg
gttgatggtgtttcttataagttaataggaaaaggatagcaggggctttg
tatgcattgggtgtttgcagaaacctgcagagccaccttctgatggaact
gaatcagctgaagaagaagtagacatgctgaggaggcacagaataagaaa
gtgctggaagatgaggcactggtgctgcagtacttgtgggacttaagggg
cttcataagaccaataggaagaggcagtgacttccagaagtcaggaacaa
cagttagagacaggcagctttgtcaggctaatgttatgctccattcgtgc
ccttggaacttttagacaagctcttccacttacctgtgctttctcatcac
tttatctactccacacgcaattagattcattccttatgacgccaatgttc
cggtctagttccacaacaaatttctggggaatgcttct
gaattccagttttatgtttgataccgaattccttacagaatgaaataaaa
tttttactacaatggggatggcccgttatctgtcttaataagtttaggca
atcccatagcattaaatgcttgcagacaatgatcaattatgtttttagaa
gcctctcctgtatggagagaagggatcttgacggcatattgaagttaaat
gtaccacaggtttcaaataagggtactgattgtgcaacatataaactgtc
agaaaagaaattaaaagcctcatgcacagactgaaagacctttagtactg
ctgttaatttggctaactgagccgaaaggccaggagtctctatgataact
tgttgattattaataagatatccagctcaccctttagaggagccatcagt
aaaaatcaatagagcattatataaaggctgtaaggaagtcattttaggaa
atatcacatcacgtacatttcaaaattttatcaacctatcttgggggtag
tggctgtctatagttcccttaaaaggctgaacaatgatatctggctcttt
gcagaaataagttaatgtctgtcttcttccagtgatcatcatctgtgcca
ctgctttgtgatatggcaagatattacatttaggagaaatctttgagtgt
atccacattaaaggaaattttttgccatagcagttccataggcacatgag
tcgtattaaaaattaacagatgcaggggcaaggagtaacctatataagtg
acaaattgctcttcaatagctttttccactagctgtaaggccagcaatcc
ttctgaggttagggatctaggggaagtgagggatgtgctctgaattaact
tttgctaggtaatttagaatataggaatctctaacattggactgaatatt
agaccagtctaagatgagttagaatgactggtcacactgaagaaaagaga
aaaatcataataactctattcattgactaattttactaagtcagtattat
cagtctcttgatgaactattgccaaaagttaatgggctaattgctagttc
ttaaccgggaaaaatggcaggcagggatggattctaaaactgaatttaat
ttagtgttttagcctatacatacgggagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_5666102_5667301
seq2: B6Ng01-069O21.b_46_1233

seq1  GAATTCCTGGCAAAGACAAAGGCTGCTATAGGTAACTGTCTGTCTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCAAAGACAAAGGCTGCTATAGGTAACTGTCTGTCTTGCTT  50

seq1  GGGAGCACATGAGCTGTAGAATTGCCATCTCTGATTTTGATCCTGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCACATGAGCTGTAGAATTGCCATCTCTGATTTTGATCCTGCACAG  100

seq1  GAGACTCTCGAGCTCTGGTTCTTGCTTTCTGCCACTTCACACAGGAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCTCGAGCTCTGGTTCTTGCTTTCTGCCACTTCACACAGGAGCCT  150

seq1  TTAGATTTTTCTGTTGTAAACCTGTGGGTTGAAACACTTTTTGGGGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTTTCTGTTGTAAACCTGTGGGTTGAAACACTTTTTGGGGTAAA  200

seq1  AAAAAAGGTCAAAGGACCCTTTCACAGAGGTTGTGTATCAGACAATCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGTCAAAGGACCCTTTCACAGAGGTTGTGTATCAGACAATCCTT  250

seq1  TATCTCAGACACTTCTATTATGGCTTATAACAGTACAAAAATTATAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGACACTTCTATTATGGCTTATAACAGTACAAAAATTATAGTAC  300

seq1  CCAAGTAGCAATGAAAATAATCTTAAGTTTGGGAGGTCACTGCATTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAGCAATGAAAATAATCTTAAGTTTGGGAGGTCACTGCATTAAAG  350

seq1  CATCCACAGCATTTGGTAAATTGAGAAACCCTGGTCTTGACAGAAGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACAGCATTTGGTAAATTGAGAAACCCTGGTCTTGACAGAAGAACT  400

seq1  ATTTGTATCATGTGAGGTCTTCTTGACCCCCGGGGCTGAGTCAGGATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATCATGTGAGGTCTTCTTGACCCCCGGGGCTGAGTCAGGATCTA  450

seq1  TAGAGAGCTAGTTACCAGCAGACCCATGTATAGCAAGTATTCCCCTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGCTAGTTACCAGCAGACCCATGTATAGCAAGTATTCCCCTTGTT  500

seq1  TCTCCTTTCCAATTCATAGTGCCTTTGCCCATTCCTTCGTGATGTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTCCAATTCATAGTGCCTTTGCCCATTCCTTCGTGATGTTTCTC  550

seq1  CATTAGGATGGACAGGTAGGGACAACTGTAGTCCACTTCTTCTTTTTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGATGGACAGGTAGGGACAACTGTAGTCCACTTCTTCTTTTTAGG  600

seq1  AAACATGGATCCCTCTTAGTGTTGGGACTTTTGGAAGTAGCATGAGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGATCCCTCTTAGTGTTGGGACTTTTGGAAGTAGCATGAGTGTT  650

seq1  TCTGGAATTTGCTGTTCTCTAATTTTTGCTTTCTGAGTGCAGCTCACCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATTTGCTGTTCTCTAATTTTTGCTTTCTGAGTGCAGCTCACCTA  700

seq1  GATGTCCTGAGTTCTTATCTAGGTCTTCCTGAGAACCAGGGTCTGGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCTGAGTTCTTATCTAGGTCTTCCTGAGAACCAGGGTCTGGTGGG  750

seq1  GTTGATGGTGTTTCTTATAAGTTAATAGGAAAAGGATAGCAGGGGCTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGGTGTTTCTTATAAGTTAATAGGAAAAGGATAGCAGGGGCTTTG  800

seq1  TATGCATTGGGTGTTTGCAGAAACCTGCAGAGCCACCTTCTGATGGAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATTGGGTGTTTGCAGAAACCTGCAGAGCCACCTTCTGATGGAACT  850

seq1  GAATCAGCTGAAGAAGAAGGTAGACATGCTGAGGAGGCACAGGAATAAGA  900
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  GAATCAGCTGAAGAAGAA-GTAGACATGCTGAGGAGGCACA-GAATAAGA  898

seq1  AAGTGCTGGAAGATGAGGCACTGGTGCTGCAGTACTTGTGGGACTTAAAG  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGTGCTGGAAGATGAGGCACTGGTGCTGCAGTACTTGTGGGACTT-AAG  947

seq1  GGGCTCCATAAGGACCAATAGGAAGAGGCCAGTGACTTCCAG-AGTCAGG  999
      ||||| ||||| |||||||||||||||| ||||||||||||| |||||||
seq2  GGGCTTCATAA-GACCAATAGGAAGAGG-CAGTGACTTCCAGAAGTCAGG  995

seq1  AACAACAGGTAGAGACAGGCAGCTTTGTCAGGCTAATGGTTAGCTCCAT-  1048
      |||||||| ||||||||||||||||||||||||||||| |  ||||||| 
seq2  AACAACAGTTAGAGACAGGCAGCTTTGTCAGGCTAATGTTATGCTCCATT  1045

seq1  -CTGCCCTTGTAACTTCTAGACGAGCTCATCCACCTACCTGTGCTTTCAT  1097
        |||||||| ||||| ||||| ||||| ||||| |||||||||||||  
seq2  CGTGCCCTTGGAACTTTTAGACAAGCTCTTCCACTTACCTGTGCTTTC--  1093

seq1  CCATCATCTTA-CTCATCCACACAGCAATCTAAGTACATACCTCATGACA  1146
       |||||  ||| ||  ||||||| ||||| ||  | ||| ||| ||||| 
seq2  TCATCACTTTATCTACTCCACAC-GCAAT-TAGATTCATTCCTTATGAC-  1140

seq1  GCCAATTGTTCAGGTCTATGTCCAAGCACAAATATTTCTGGGGAATGAGC  1196
      ||||| ||||| ||||||  ||||  || | | |||||||||||||  ||
seq2  GCCAA-TGTTCCGGTCTAGTTCCA--CA-ACAAATTTCTGGGGAAT--GC  1184

seq1  TTCT  1200
      ||||
seq2  TTCT  1188