BAC Information

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BAC

Clone NameB6Ng01-070D08
Chromosome14 (Build37)
Map Location 4,606,665 - 4,607,899
singlet/doubletsinglet
Overlap geneLOC100041162
Upstream geneLOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177
Downstream geneLOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070D08.bB6Ng01-070D08.g
ACCDH888279DH888280
length1,2401,203
definitionDH888279|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D08, 5' end.DH888280|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaaccagagaccatgaaacttatagaggagaaagtggg
gaaaagcatagaagatatgggcacagggggaaagttcctgaatagaacag
gaatggctggtgctgtaagactgagaatggacaaatgggacctcatgaaa
ctgcaaagcttctgaaaagcaaaagacaccatcaataagacaaaaaggcc
accaataggttgggaaaggatctttacctatcccaaatcagataggggac
taataaccgatatgtataaagaacacaagaaggtggacttcagaaaatcc
aataaccccattaaaaagtggggctcagagctaaacaaagaattgtcacc
tgaggaataccgaatggcagagaagcacttgaaaaatgttcagcatcctt
aatcatcagggaaatgcaaatcaaaacaaccctgagattctacttcacac
cagtcagaatggctaagatcaaaaattctggtgacagcagatgctggcaa
ggatgtggagaaagaggaacatttctccattgttgttgggattgcaagct
tgtacaatcactctggaaatcagtctggcagttcctcagaaaattggaca
taggactactggaggatcccagaataccactcctgggcatatatccagaa
gatgttccaactggtaagaaggatacatgttctactatgttcatagcagc
cttatttattatagccagaagctggaaataacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacttttacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcccaaccaaatggatggacct
ggagggaatcatactgagtgaggtaacccaatcacaaaagaattcacatg
atatgtactttcaggtaagtggattttatcccagaaacttagaataccca
atatgagatacaatttgcaaacacaagaaactcagagaaatagaccgaag
tgtgacactttgctccttcttatattgggaacaaacacccaggaagagta
ctgagacaaaatttgagttgagaagaagatgtatcatctagaaactgcca
tagaagtgatgctccagtcagctattgatggaatccattgccgccattga
aggacttgaagaagtatccaaggaactagaatcgcaactttaggtgaaca
aattgacatcacgatactcccctccgcatacctcctcgct
gaattcaccacagaactcaaatatttcatcaagttggacacataatgcaa
gtgcattgttgcttgaagtatggtttccagtcctaagcattggcattgtc
agcagactgtaaggcaggcaattcctcaggtcctaccacatacccttatg
accagaatatagagagagtcacacacacacacacatgcatgcacacagaa
tcagggtgtgtttgcagggagaatgagaaagtacaatttaaatagaatcc
agaggaaatgcagaggacattctgtttataagacccaaaatctgagaaaa
gtattaatgagcctaagaccttccatcatttatcagaatggaccaaatgg
gaccaagctttcctggtgatataggaagcttcagcaagcaacacctgcca
gacaattacaaagctttgcgaacaaacaaacaacgaactcaagcaagcaa
acaatcaatcaaaacctcacagcaactaatatctcactcaaacggtcaca
tgtcagtgcctctatcaatacatgctgagacatcacatcctcttcaatcc
ctcagttgtaggctttcattttcatataaaaaaaatagaataccctttgt
ccgcagctcactcctgctctgacttcaagttcagcctgtgagaatgttta
gtgagaaaaggttgggcacagtgacaccctggagttacagtctccaagta
ccataaaatttaataagaataaattgtaggccataccatagactcaagaa
attgaccatgatgtttgacataatgaaaaatacctcttgtgcaaagcttt
ctcactgatgaagatcaggtgatcttgtagctcatttttcccactggtca
tcggctgagtggttaggctttccactttcctcacccatcttctgaacagg
agtgttggggatgatggtagtacaccagcagcccctatgggtagatgaca
caagtgaatatacatactgtcaaggctcagagcatgacagacactgagtc
ctataagacatctgacaaacagatgcatgtgacccagtcattcctctttc
atttcactttgcaatgcatcatgtgaccagacaggatcctcagctatcat
agctgcgatgattattagcagtactgtcataagctttgatgacctcgaac
tatctagcccaagaccaaatggtgtggaagttacatatctcctggtgcag
gtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4606665_4607899
seq2: B6Ng01-070D08.g_66_1268 (reverse)

seq1  GACCTG--ACAGGAGATATGGGCATCTCCACACCATCTTGGTGCTTGTGG  48
      ||||||   |||||||||| |  |  |||||||||| ||||| ||  |||
seq2  GACCTGCACCAGGAGATAT-GTAACTTCCACACCAT-TTGGT-CT--TGG  45

seq1  GCTATGATAGTTTTCTGATGGTTTCTATACCAAAAGCTTATGGACAGTAC  98
      |||| |||||||    || |   ||       ||||||||| ||||||||
seq2  GCTA-GATAGTT---CGAGGTCATC-------AAAGCTTAT-GACAGTAC  83

seq1  TGCCTAATTAAATCATACGCAGCTATGAATAAGCCTGAGGATCCTGTCCT  148
      || |||||  |||||| |||||||||| |||   ||||||||||||||  
seq2  TG-CTAAT--AATCAT-CGCAGCTATG-ATA--GCTGAGGATCCTGTC--  124

seq1  TGGTCACATGATGCATGTGCAAAGTGAAATGAAAGAGGAATGACTGGGTC  198
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGGTCACATGATGCAT-TGCAAAGTGAAATGAAAGAGGAATGACTGGGTC  173

seq1  ACATGCATTCCTGTTTTGTCAGATGTCTGTATAGGACTCAGTGTTCTGTC  248
      ||||||||  ||| |||||||||||||| |||||||||||||| ||||||
seq2  ACATGCAT--CTG-TTTGTCAGATGTCT-TATAGGACTCAGTG-TCTGTC  218

seq1  AATGCTCTGAGCCTTGACAGTATGTATATTCACTTGTGTTCATCTACCCA  298
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  -ATGCTCTGAGCCTTGACAGTATGTATATTCACTTGTG-TCATCTACCCA  266

seq1  TAGGGGCTGCTGGTGTACTACCATCATCCCCAACACTCCTGTTCAGAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCTGCTGGTGTACTACCATCATCCCCAACACTCCTGTTCAGAAGA  316

seq1  TGGGTGAGGAAAGTGGAAAGCCTAACCACTCAGCCGATGACCAGTGGGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGAGGAAAGTGGAAAGCCTAACCACTCAGCCGATGACCAGTGGGAA  366

seq1  AAATGAGCTACAAGATCACCTGATCTTCATCAGTGAGAAAGCTTTGCACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGCTACAAGATCACCTGATCTTCATCAGTGAGAAAGCTTTGCACA  416

seq1  AGAGGTATTTTTCATTATGTCAAACATCATGGTCAATTTCTTGAGTCTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTATTTTTCATTATGTCAAACATCATGGTCAATTTCTTGAGTCTAT  466

seq1  GGTATGGCCTACAATTTATTCTTATTAAATTTTATGGTACTTGGAGACTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGCCTACAATTTATTCTTATTAAATTTTATGGTACTTGGAGACTG  516

seq1  TAACTCCAGGGTGTCACTGTGCCCAACCTTTTCTCACTAAACATTCTCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCAGGGTGTCACTGTGCCCAACCTTTTCTCACTAAACATTCTCAC  566

seq1  AGGCTGAACTTGAAGTCAGAGCAGGAGTGAGCTGCGGACAAAGGGTATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAACTTGAAGTCAGAGCAGGAGTGAGCTGCGGACAAAGGGTATTC  616

seq1  TATTTTTTTTATATGAAAATGAAAGCCTACAACTGAGGGATTGAAGAGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTTATATGAAAATGAAAGCCTACAACTGAGGGATTGAAGAGGA  666

seq1  TGTGATGTCTCAGCATGTATTGATAGAGGCACTGACATGTGACCGTTTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTCTCAGCATGTATTGATAGAGGCACTGACATGTGACCGTTTGA  716

seq1  GTGAGATATTAGTTGCTGTGAGGTTTTGATTGATTGTTTGCTTGCTTGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATATTAGTTGCTGTGAGGTTTTGATTGATTGTTTGCTTGCTTGAG  766

seq1  TTCGTTGTTTGTTTGTTCGCAAAGCTTTGTAATTGTCTGGCAGGTGTTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTGTTTGTTTGTTCGCAAAGCTTTGTAATTGTCTGGCAGGTGTTGC  816

seq1  TTGCTGAAGCTTCCTATATCACCAGGAAAGCTTGGTCCCATTTGGTCCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAAGCTTCCTATATCACCAGGAAAGCTTGGTCCCATTTGGTCCAT  866

seq1  TCTGATAAATGATGGAAGGTCTTAGGCTCATTAATACTTTTCTCAGATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAAATGATGGAAGGTCTTAGGCTCATTAATACTTTTCTCAGATTT  916

seq1  TGGGTCTTATAAACAGAATGTCCTCTGCATTTCCTCTGGATTCTATTTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTATAAACAGAATGTCCTCTGCATTTCCTCTGGATTCTATTTAA  966

seq1  ATTGTACTTTCTCATTCTCCCTGCAAACACACCCTGATTCTGTGTGCATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTTTCTCATTCTCCCTGCAAACACACCCTGATTCTGTGTGCATG  1016

seq1  CATGTGTGTGTGTGTGTGACTCTCTCTATATTCTGGTCATAAGGGTATGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTGTGTGTGTGACTCTCTCTATATTCTGGTCATAAGGGTATGT  1066

seq1  GGTAGGACCTGAGGAATTGCCTGCCTTACAGTCTGCTGACAATGCCAATG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGACCTGAGGAATTGCCTGCCTTACAGTCTGCTGACAATGCCAATG  1116

seq1  CTTAGGACTGGAAACCATACTTCAAGCAACAATGCACTTGCATTATGTGT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGACTGGAAACCATACTTCAAGCAACAATGCACTTGCATTATGTGT  1166

seq1  CCAACTTGATGAAATATTTGAGTTCTGTGGTGAATTC  1235
      |||||||||||||||||||||||||||||||||||||
seq2  CCAACTTGATGAAATATTTGAGTTCTGTGGTGAATTC  1203