BAC Information

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BAC

Clone NameB6Ng01-070L10
Chromosome14 (Build37)
Map Location 84,991,924 - 84,993,167
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
Downstream geneLOC629794, LOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070L10.bB6Ng01-070L10.g
ACCDH888630DH888631
length1,2241,224
definitionDH888630|Mus musculus domesticus DNA, BAC clone: B6Ng01-070L10, 5' end.DH888631|Mus musculus domesticus DNA, BAC clone: B6Ng01-070L10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcctataaagtgtgttctctaaaacacacacatataaatgg
acacatttccattgcagggtaatttaatgaatatatcccatttttattaa
aattcaaaattgtggctttaaaaaagcttgcattcctacaatttcctata
ctaatacacaactactctgttgtgttgtggaaactgcaaaaatgttcttt
aatttttttctggagtaattttagggcaacaccattgggactgcaaaatg
tttcttataaacactagttcactttatccattatagtttgtttccacaat
cactttatacctacagaataccacacctttttgattaaagtgaaggcagt
aatctattacagcgatatttccattagtgtgcacactttcctaccacacg
tagattttgttaggggttggagtcaaaatcatcagagtaattggaattgt
gaaaggtcatgaaatagtttgtaaaaaaaaaaatagtgggaaaagtcaac
atactcaaatttaacacatacattcaaataaattccataaaaaatctttt
taatttttattttacgtacgtgagtgatttgcttatatctttgtctgtgt
atcatatgtgtgtctaatgtactcaggaaataaaagaggccattcaaact
ctagaattggagttactggactactttgtatcaccatgtggatgtcacat
tgatcctttgccagaaaacaggtgcgtttttagcattgaggcatctctct
acacttacagtgattttattttattttattttattttattttattttatt
ttattaaataagaagcacacaaaacatatttggtggtcaaacactagtga
aaacttgaagtacaacattcaaaatttctaaagaatttcagtatgatgac
aacacaacctcaaatcaagaaagaaagtcttctggctctgcactgtttat
gctcagaaaattgtccctccctgtgcagtctataccaatgaaaaagaata
cacaattgttacatatcatttacagagatgagtataacttataccctatc
tctactcattctgtcaatattttctgaatcctctctctttctgccctcaa
tttgatgtcatttcagctttcttcctacaactatgcacctttaaaggtgt
gtactagaaatgttcttatatgagcaaggaattggtggtcttgcattcac
tgaaccttagactagttttgtgga
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactatcaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgttcctgtgccctttactgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
ctttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttct
ggaggcactcagcgctatgagtttccctcttagaaatgctttcatgtgtc
cataggtttgggtacgttggtggcttcatttcataactctaaaaagtctt
taatttttttcttattcttcttgacaggttcatggagagggtgtaattca
gttccacgtgaaggttgcttcatattagtgttgtatggagaatagagctc
taggccatgggctgatggatcatgggacatttcaaattttgtgaacttcg
gagggccgatcttgtggcgtgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84991924_84993167
seq2: B6Ng01-070L10.b_44_1267

seq1  GAATTCTTTGCCTATAAAGTGTGTTCTCTAAAACACACACATATAAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCCTATAAAGTGTGTTCTCTAAAACACACACATATAAATGG  50

seq1  ACACATTTCCATTGCAGGGTAATTTAATGAATATATCCCATTTTTATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTCCATTGCAGGGTAATTTAATGAATATATCCCATTTTTATTAA  100

seq1  AATTCAAAATTGTGGCTTTAAAAAAGCTTGCATTCCTACAATTTCCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAATTGTGGCTTTAAAAAAGCTTGCATTCCTACAATTTCCTATA  150

seq1  CTAATACACAACTACTCTGTTGTGTTGTGGAAACTGCAAAAATGTTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACACAACTACTCTGTTGTGTTGTGGAAACTGCAAAAATGTTCTTT  200

seq1  AATTTTTTTCTGGAGTAATTTTAGGGCAACACCATTGGGACTGCAAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTCTGGAGTAATTTTAGGGCAACACCATTGGGACTGCAAAATG  250

seq1  TTTCTTATAAACACTAGTTCACTTTATCCATTATAGTTTGTTTCCACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATAAACACTAGTTCACTTTATCCATTATAGTTTGTTTCCACAAT  300

seq1  CACTTTATACCTACAGAATACCACACCTTTTTGATTAAAGTGAAGGCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTATACCTACAGAATACCACACCTTTTTGATTAAAGTGAAGGCAGT  350

seq1  AATCTATTACAGCGATATTTCCATTAGTGTGCACACTTTCCTACCACACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTACAGCGATATTTCCATTAGTGTGCACACTTTCCTACCACACG  400

seq1  TAGATTTTGTTAGGGGTTGGAGTCAAAATCATCAGAGTAATTGGAATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTGTTAGGGGTTGGAGTCAAAATCATCAGAGTAATTGGAATTGT  450

seq1  GAAAGGTCATGAAATAGTTTGTAAAAAAAAAAATAGTGGGAAAAGTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTCATGAAATAGTTTGTAAAAAAAAAAATAGTGGGAAAAGTCAAC  500

seq1  ATACTCAAATTTAACACATACATTCAAATAAATTCCATAAAAAATCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAAATTTAACACATACATTCAAATAAATTCCATAAAAAATCTTTT  550

seq1  TAATTTTTATTTTACGTACGTGAGTGATTTGCTTATATCTTTGTCTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTATTTTACGTACGTGAGTGATTTGCTTATATCTTTGTCTGTGT  600

seq1  ATCATATGTGTGTCTAATGTACTCAGGAAATAAAAGAGGCCATTCAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATGTGTGTCTAATGTACTCAGGAAATAAAAGAGGCCATTCAAACT  650

seq1  CTAGAATTGGAGTTACTGGACTACTTTGTATCACCATGTGGATGTCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTGGAGTTACTGGACTACTTTGTATCACCATGTGGATGTCACAT  700

seq1  TGATCCTTTGCCAGAAAACAGGTGCGTTTTTAGCATTGAGGCATCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTTGCCAGAAAACAGGTGCGTTTTTAGCATTGAGGCATCTCTCT  750

seq1  ACACTTACAGTGATTTTATTTTATTTTATTTTATTTTATTTTATTTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTACAGTGATTTTATTTTATTTTATTTTATTTTATTTTATTTTATT  800

seq1  TTATTAAATAAGAAGCACACAAAACATATTTGGTGGTCAAACACTAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAATAAGAAGCACACAAAACATATTTGGTGGTCAAACACTAGTGA  850

seq1  AAACTTGAAGTACAACATTCAAAATTTCTAAAGAATTTCAGTATGATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAAGTACAACATTCAAAATTTCTAAAGAATTTCAGTATGATGAC  900

seq1  AACACAACCTCAAATCAAGAAAGAAAGTCTTCTGGCTCTGCACTGTTTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACCTCAAATCAAGAAAGAAAGTCTTCTGGCTCTGCACTGTTTAT  950

seq1  GCTCAGAAAATTGTCCCTCCCTGTGGCAGTCTATACCAATGAAAAAGAAT  1000
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCTCAGAAAATTGTCCCTCCCTGT-GCAGTCTATACCAATGAAAAAGAAT  999

seq1  ACACAATTGTTACATATCATTTACAGAGATGAGGTATAACTTATACCCTA  1050
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACACAATTGTTACATATCATTTACAGAGATGA-GTATAACTTATACCCTA  1048

seq1  TCTCTACCTCATTCTGTCAAATATTTCTGATTCCTCTCTCTTTCTGCCCC  1100
      |||||| |||||||||||||   ||||||| ||||||||||||||| |||
seq2  TCTCTA-CTCATTCTGTCAATATTTTCTGAATCCTCTCTCTTTCTG-CCC  1096

seq1  TCAATTTGATGTCATTTTCAGCTTTCTT-CTACAAACTAATGGCACC-TT  1148
      |||||||||||||| ||||||||||||| |||| |||||   ||||| ||
seq2  TCAATTTGATGTCA-TTTCAGCTTTCTTCCTAC-AACTA--TGCACCTTT  1142

seq1  AAAGGTGTGTACTAAGGACATGTCTATATTGAAGCCAAAGGGATATGTGT  1198
      ||||||||||||||  || ||||   |||   |||  |||| ||     |
seq2  AAAGGTGTGTACTA--GAAATGTTCTTATATGAGC--AAGGAAT-----T  1183

seq1  GGTGTCTTTGCATTCCAACTGGAACACTTAGACCTAGTTTTGTGGA  1244
      ||||   ||||||||  ||| |||| |||||| |||||||||||||
seq2  GGTGGTCTTGCATTC--ACT-GAAC-CTTAGA-CTAGTTTTGTGGA  1224