BAC Information

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BAC

Clone NameB6Ng01-070O21
Chromosome14 (Build37)
Map Location 32,273,466 - 32,469,505
singlet/doubletdoublet
Overlap geneMettl6, Eaf1, Colq, Hacl1, Btd
Upstream geneCacna1d, Dcp1a, Tkt, Prkcd, EG665466, Rft1, Sfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5
Downstream geneAnkrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070O21.bB6Ng01-070O21.g
ACCDH888776DH888777
length1,165658
definitionDH888776|Mus musculus domesticus DNA, BAC clone: B6Ng01-070O21, 5' end.DH888777|Mus musculus domesticus DNA, BAC clone: B6Ng01-070O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,468,334 - 32,469,505)(32,273,466 - 32,274,123)
sequence
gaattctctgagaagtcacccagccttattctacaaagcataatgcactt
ttcacgccacatcagagttcacaggaaaacacaaccgtggctgagccgtg
aggagagcccacagggcggcatctccaggtagtttcctcttctgtaaagc
tcacagctcccaagagccatcatcgaatccaccaaatgccaggaagagtg
ttatatgagcccagccatcaggaggctgcccaagaggataatctcattca
agaccaacctgggcaatattctgagaattcattttaaataaaattatttg
aagtgaccctcaatagggaattgttttgggagtgtgttataaatttcccc
ttcattttcctgttgagctaattaaaattggagtcataaggaccaccctc
taaaagaacaacacagtgggcttagagccccctgctgacctggtctggga
agatgaactcagaagacagacaacaccaaggccgacctttccttttaaat
gcatgttgggcaccaatccctacgtgaacaatggacgcaagctctctagg
tctgtcgggtagaaccaagcgcctgctctcgtcagacacccgtgctcctg
cctgctgatcctcggaagcgaggaatgaagatgcagaagcaggcagtggg
tgacagggccaacgtcacctcctgtccctcatatccacacgatgtccttc
actaccagagcgatggcagggggtgtggaagagacagaacaaccaacatg
gaagcaagaggccgacaggccacatgcaaaggccccttctccactgcaaa
gctgacggggacatattggaaaggtagctagctatgttcattcagccaga
ggcgacagacactcagggaccctgatcaggaagaggagacatgtgacatt
gtttgtggcattgtttgggcacaggcacaccaccttgagagaggctgttg
gtgttcagtcagagaacagagtgtgatagaaatggcagcttcatcccccc
accttcttcccccaacctgccctgccagggcttatttaactggtcagaat
atagagcttcgagtagcacgtggttactgcacctcagctgcgagacctag
catttctgcctgtctgagtggggtagtcagaaatatagtgggcacttctt
ttctgtgagataggt
gaattcagccatttaaagagtatgtggaatccaggaagccatcttacccc
ggggtgtatgttctcaataccaaatcttactacttttcaatcagttgtat
tcaatctgtggtctgactcagctttcagtgtgagctaatcctggtggtgt
aggactctgctgcagggaagaggaaagaggatcataagttcaaagcttgc
ctaggctacagagtgagtttaagttcagcctgtataacttagtgagatac
tgtctcaaaacacccagaaaaaataaggaaaaaataaataaattggactg
tggatgtagctcaggggtagactatttatatagcattcatgaagccctgg
ctttgaatcccaggactaaaaaataaaagttagctgggcagtggtggtgc
atgcctttaatcccagcacttgagaggcagaggcaggcgaatttctaagt
tcgaggccagcctgatctaaagagtaagttccaggacagccagggctaca
cagagaaaccctgactcgaaaaaccaaattaattaattaattaattaatt
aattaaaaaataaagttggtggaaggtaatctcacgagctgcagagaggg
actgcttgtgacaactgcactgttgtccatttgttaggccttggtggggg
ggtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32468334_32469505
seq2: B6Ng01-070O21.b_48_1212 (reverse)

seq1  ACCTATACTACAGAGAAAGAAGGTGCCCACATAATTCCTGACTTAACCAC  50
      ||||||   ||||| |||||| ||||||||   ||| ||||||   ||||
seq2  ACCTATCTCACAGA-AAAGAA-GTGCCCACTATATTTCTGACTACCCCAC  48

seq1  ATCAGACCAGGCAGAAATGCTAGTGCCTCGCAGGCTGAGGTGCAGGTACC  100
       ||||| |||||||||||||||| | |||||| ||||||||||||  |||
seq2  -TCAGA-CAGGCAGAAATGCTAG-GTCTCGCA-GCTGAGGTGCAGTAACC  94

seq1  ACGTGCTACTCGAAGCTCTATACTACTGACCAGTTAAATAGGCCTGGGCA  150
      |||||||||||||||||||||| | ||||||||||||||| |||  ||||
seq2  ACGTGCTACTCGAAGCTCTATA-TTCTGACCAGTTAAATAAGCCCTGGCA  143

seq1  GGGCAGGGTGGGGGAAGGAGGTGGGGGGATGGAGCTGCCATTTCTATCAC  200
      ||||||| ||||||||| ||||||||||||| ||||||||||||||||||
seq2  GGGCAGGTTGGGGGAAGAAGGTGGGGGGATGAAGCTGCCATTTCTATCAC  193

seq1  ACTCTGTTCTCTGACTGAACACCAACAGCCTCTCTCAAGGTGGTGTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTTCTCTGACTGAACACCAACAGCCTCTCTCAAGGTGGTGTGCCT  243

seq1  GTGCCCAAACAATGCCACAAACAATGTCACATGTCTCCTCTTCCTGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCAAACAATGCCACAAACAATGTCACATGTCTCCTCTTCCTGATCA  293

seq1  GGGTCCCTGAGTGTCTGTCGCCTCTGGCTGAATGAACATAGCTAGCTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCTGAGTGTCTGTCGCCTCTGGCTGAATGAACATAGCTAGCTACC  343

seq1  TTTCCAATATGTCCCCGTCAGCTTTGCAGTGGAGAAGGGGCCTTTGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATATGTCCCCGTCAGCTTTGCAGTGGAGAAGGGGCCTTTGCATG  393

seq1  TGGCCTGTCGGCCTCTTGCTTCCATGTTGGTTGTTCTGTCTCTTCCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGTCGGCCTCTTGCTTCCATGTTGGTTGTTCTGTCTCTTCCACAC  443

seq1  CCCCTGCCATCGCTCTGGTAGTGAAGGACATCGTGTGGATATGAGGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCATCGCTCTGGTAGTGAAGGACATCGTGTGGATATGAGGGACA  493

seq1  GGAGGTGACGTTGGCCCTGTCACCCACTGCCTGCTTCTGCATCTTCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGACGTTGGCCCTGTCACCCACTGCCTGCTTCTGCATCTTCATTC  543

seq1  CTCGCTTCCGAGGATCAGCAGGCAGGAGCACGGGTGTCTGACGAGAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTTCCGAGGATCAGCAGGCAGGAGCACGGGTGTCTGACGAGAGCAG  593

seq1  GCGCTTGGTTCTACCCGACAGACCTAGAGAGCTTGCGTCCATTGTTCACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTTGGTTCTACCCGACAGACCTAGAGAGCTTGCGTCCATTGTTCACG  643

seq1  TAGGGATTGGTGCCCAACATGCATTTAAAAGGAAAGGTCGGCCTTGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATTGGTGCCCAACATGCATTTAAAAGGAAAGGTCGGCCTTGGTGT  693

seq1  TGTCTGTCTTCTGAGTTCATCTTCCCAGACCAGGTCAGCAGGGGGCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTTCTGAGTTCATCTTCCCAGACCAGGTCAGCAGGGGGCTCTA  743

seq1  AGCCCACTGTGTTGTTCTTTTAGAGGGTGGTCCTTATGACTCCAATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACTGTGTTGTTCTTTTAGAGGGTGGTCCTTATGACTCCAATTTTA  793

seq1  ATTAGCTCAACAGGAAAATGAAGGGGAAATTTATAACACACTCCCAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTCAACAGGAAAATGAAGGGGAAATTTATAACACACTCCCAAAAC  843

seq1  AATTCCCTATTGAGGGTCACTTCAAATAATTTTATTTAAAATGAATTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTATTGAGGGTCACTTCAAATAATTTTATTTAAAATGAATTCTC  893

seq1  AGAATATTGCCCAGGTTGGTCTTGAATGAGATTATCCTCTTGGGCAGCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTGCCCAGGTTGGTCTTGAATGAGATTATCCTCTTGGGCAGCCT  943

seq1  CCTGATGGCTGGGCTCATATAACACTCTTCCTGGCATTTGGTGGATTCGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGGCTGGGCTCATATAACACTCTTCCTGGCATTTGGTGGATTCGA  993

seq1  TGATGGCTCTTGGGAGCTGTGAGCTTTACAGAAGAGGAAACTACCTGGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTCTTGGGAGCTGTGAGCTTTACAGAAGAGGAAACTACCTGGAG  1043

seq1  ATGCCGCCCTGTGGGCTCTCCTCACGGCTCAGCCACGGTTGTGTTTTCCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCGCCCTGTGGGCTCTCCTCACGGCTCAGCCACGGTTGTGTTTTCCT  1093

seq1  GTGAACTCTGATGTGGCGTGAAAAGTGCATTATGCTTTGTAGAATAAGGC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTCTGATGTGGCGTGAAAAGTGCATTATGCTTTGTAGAATAAGGC  1143

seq1  TGGGTGACTTCTCAGAGAATTC  1172
      ||||||||||||||||||||||
seq2  TGGGTGACTTCTCAGAGAATTC  1165

seq1: chr14_32273466_32274123
seq2: B6Ng01-070O21.g_69_726

seq1  GAATTCAGCCATTTAAAGAGTATGTGGAATCCAGGAAGCCATCTTACCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCATTTAAAGAGTATGTGGAATCCAGGAAGCCATCTTACCCC  50

seq1  GGGGTGTATGTTCTCAATACCAAATCTTACTACTTTTCAATCAGTTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGTATGTTCTCAATACCAAATCTTACTACTTTTCAATCAGTTGTAT  100

seq1  TCAATCTGTGGTCTGACTCAGCTTTCAGTGTGAGCTAATCCTGGTGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTGTGGTCTGACTCAGCTTTCAGTGTGAGCTAATCCTGGTGGTGT  150

seq1  AGGACTCTGCTGCAGGGAAGAGGAAAGAGGATCATAAGTTCAAAGCTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCTGCTGCAGGGAAGAGGAAAGAGGATCATAAGTTCAAAGCTTGC  200

seq1  CTAGGCTACAGAGTGAGTTTAAGTTCAGCCTGTATAACTTAGTGAGATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTACAGAGTGAGTTTAAGTTCAGCCTGTATAACTTAGTGAGATAC  250

seq1  TGTCTCAAAACACCCAGAAAAAATAAGGAAAAAATAAATAAATTGGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAAAACACCCAGAAAAAATAAGGAAAAAATAAATAAATTGGACTG  300

seq1  TGGATGTAGCTCAGGGGTAGACTATTTATATAGCATTCATGAAGCCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTAGCTCAGGGGTAGACTATTTATATAGCATTCATGAAGCCCTGG  350

seq1  CTTTGAATCCCAGGACTAAAAAATAAAAGTTAGCTGGGCAGTGGTGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATCCCAGGACTAAAAAATAAAAGTTAGCTGGGCAGTGGTGGTGC  400

seq1  ATGCCTTTAATCCCAGCACTTGAGAGGCAGAGGCAGGCGAATTTCTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTAATCCCAGCACTTGAGAGGCAGAGGCAGGCGAATTTCTAAGT  450

seq1  TCGAGGCCAGCCTGATCTAAAGAGTAAGTTCCAGGACAGCCAGGGCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGCCAGCCTGATCTAAAGAGTAAGTTCCAGGACAGCCAGGGCTACA  500

seq1  CAGAGAAACCCTGACTCGAAAAACCAAATTAATTAATTAATTAATTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCCTGACTCGAAAAACCAAATTAATTAATTAATTAATTAATT  550

seq1  AATTAAAAAATAAAGTTGGTGGAAGGTAATCTCACGAGCTGCAGAGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAATAAAGTTGGTGGAAGGTAATCTCACGAGCTGCAGAGAGGG  600

seq1  ACTGCTTGTGACAACTGCACTGTTGTCCATTTGTTAGGCCTTGGTGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTGTGACAACTGCACTGTTGTCCATTTGTTAGGCCTTGGTGGGGG  650

seq1  GGTGGGGT  658
      ||||||||
seq2  GGTGGGGT  658