BAC Information

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BAC

Clone NameB6Ng01-071G10
Chromosome14 (Build37)
Map Location 113,768,206 - 113,866,510
singlet/doubletdoublet
Overlap genenone
Upstream geneEG223186, LOC100043509, Tpm3-rs7
Downstream geneLOC100043510, LOC382947, LOC668791, LOC100043821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071G10.bB6Ng01-071G10.g
ACCDH889111DH889112
length1,1981,047
definitionDH889111|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G10, 5' end.DH889112|Mus musculus domesticus DNA, BAC clone: B6Ng01-071G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,768,206 - 113,769,463)(113,865,447 - 113,866,510)
sequence
gaattctactataatgttatttgttcatcatatttgacatttattttggt
cacaatcagtttaaatacacttactagcaatgagaaaattgtattttcta
tttccaatcaaatagcacaagtctgtcacagcaatagaatggtagaatta
cgtaactatacataaaacattttcctacataattaaacattttgtaaagt
agagtgtgttgtgcatagtgtttgcctgtgtgaaacattgtgtgagcatg
attcaatggtgtttgaaaaagtagcaaattgcttttgagtataatctact
attgtaataattataagtgtattagaattaatattcatgaagaaactttc
catattctaaatttcactgaaattcatgtaaaatgtaaaataagattttt
accaatctataaaattaaaattaaaattcacaaatgaattaaacattttg
ttttgttttgtttttgttttgatttgttttttgagacagggtttctctgt
gtagccctggctgccctggaactcactctgttgaacaggctcaccttgta
ctcagaaatctgtccacctctgcctcccaagtgctgtgattaaaggcatg
catcaccattgcctggctgtgaattcaactgttaaacatacatttcagaa
taaagaattatttggtaagaacaaaatctaaaattttgtgtgtgttaaag
tataattcttttggattcattctcgaacttttgtgccttctctcaatctc
ttttccttcttttgatttgtcttgtccaatttttgatgatactgttttat
tttatgttattatattttattttattctatttaaaattgaatgaatgaat
gaatgatgaatgaatgagggtaaagtttagtagcagaactgtcattttta
cttgcttagatagagaaataattttttcccctgaatggagtgatattggg
tatatccattgctctaggacaggtctcatgttcagagtagttgaccaaaa
aagatggactcccacatatttggtgtgcttttatttatataacagggtgt
agatatttgctgttttagtgtggtctgttttgtttactttcatcgttttg
ttgtttattgggatatgattttgttcccagatcttagcagtgcggaatat
aattgtaatatgtttacatatattaatttatataaatatatatatgtg
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttagaataggtaaagatcctattccaatttcttaagtacag
tttttacattaagacagtggatttacttatttcttgtgaaatataagttt
attgactgggctcaatgtctcatgactgtaatcccaacacttgattaaca
gagacagtagggttgttaaaaacttgaacacaacctagcacatagtttca
ggccggcttggttaccataacaagacaccttaaaattcacatgaataaaa
ttattatgtaatttcttacaatataggaacagtttttttctaggtaaaat
aatttatgtatagtctttaaacttatctttaacataagttaagttgttga
ttaaactacatttccctcaaattaagacacaaattataactaaaattagc
cagtatgcttttggaacattctttctttcgacatgtctagagatctcaaa
atggaagagactatatggagtagaattgaaattctgtgtattttgtattt
tcaattttgtatatcttcttttacaaccatcaacaatatttgattacaca
tcatataacaagataaatatattacatataaatatacatagacatagaat
atagatggaaaactacttaaaatattcatcaaaagaatatgtttgctaca
attcaatttttaaaacaaaaatttggttttcagaatatatacatatatat
tcactagaacaaattacatatatattcatatatatatatcatagacaaat
gagatagcacagtgattgcatgctcactgttcttgagtctcacacccatg
tcaggggtctctcaacggcctttaccttcactctagggaatcgaagctct
tactgcgtcatagtacttgagcccacttcacaaaataacagatgtgtgtg
tatggctcacatgcacaccatactaatacttatttttaaatatgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113768206_113769463
seq2: B6Ng01-071G10.b_45_1242

seq1  GAATTCTACTATAATGTTATTTGTTCATCATATTTGACATTTATTTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTATAATGTTATTTGTTCATCATATTTGACATTTATTTTGGT  50

seq1  CACAATCAGTTTAAATACACTTACTAGCAATGAGAAAATTGTATTTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCAGTTTAAATACACTTACTAGCAATGAGAAAATTGTATTTTCTA  100

seq1  TTTCCAATCAAATAGCACAAGTCTGTCACAGCAATAGAATGGTAGAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATCAAATAGCACAAGTCTGTCACAGCAATAGAATGGTAGAATTA  150

seq1  CGTAACTATACATAAAACATTTTCCTACATAATTAAACATTTTGTAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAACTATACATAAAACATTTTCCTACATAATTAAACATTTTGTAAAGT  200

seq1  AGAGTGTGTTGTGCATAGTGTTTGCCTGTGTGAAACATTGTGTGAGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTGTTGTGCATAGTGTTTGCCTGTGTGAAACATTGTGTGAGCATG  250

seq1  ATTCAATGGTGTTTGAAAAAGTAGCAAATTGCTTTTGAGTATAATCTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGGTGTTTGAAAAAGTAGCAAATTGCTTTTGAGTATAATCTACT  300

seq1  ATTGTAATAATTATAAGTGTATTAGAATTAATATTCATGAAGAAACTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATAATTATAAGTGTATTAGAATTAATATTCATGAAGAAACTTTC  350

seq1  CATATTCTAAATTTCACTGAAATTCATGTAAAATGTAAAATAAGATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTAAATTTCACTGAAATTCATGTAAAATGTAAAATAAGATTTTT  400

seq1  ACCAATCTATAAAATTAAAATTAAAATTCACAAATGAATTAAACATTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCTATAAAATTAAAATTAAAATTCACAAATGAATTAAACATTTTG  450

seq1  TTTTGTTTTGTTTTTGTTTTGATTTGTTTTTTGAGACAGGGTTTCTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTTGTTTTGATTTGTTTTTTGAGACAGGGTTTCTCTGT  500

seq1  GTAGCCCTGGCTGCCCTGGAACTCACTCTGTTGAACAGGCTCACCTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCCTGGCTGCCCTGGAACTCACTCTGTTGAACAGGCTCACCTTGTA  550

seq1  CTCAGAAATCTGTCCACCTCTGCCTCCCAAGTGCTGTGATTAAAGGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATCTGTCCACCTCTGCCTCCCAAGTGCTGTGATTAAAGGCATG  600

seq1  CATCACCATTGCCTGGCTGTGAATTCAACTGTTAAACATACATTTCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCATTGCCTGGCTGTGAATTCAACTGTTAAACATACATTTCAGAA  650

seq1  TAAAGAATTATTTGGTAAGAACAAAATCTAAAATTTTGTGTGTGTTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATTATTTGGTAAGAACAAAATCTAAAATTTTGTGTGTGTTAAAG  700

seq1  TATAATTCTTTTGGATTCATTCTCGAACTTTTGTGCCTTCTCTCAATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCTTTTGGATTCATTCTCGAACTTTTGTGCCTTCTCTCAATCTC  750

seq1  TTTTCCTTCTTTTGATTTGTCTTGTCCAATTTTTGATGATACTGTTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCTTTTGATTTGTCTTGTCCAATTTTTGATGATACTGTTTTAT  800

seq1  TTTATGTTATTATATTTTATTTTATTCTATTTAAAATTGAATGAATGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTATTATATTTTATTTTATTCTATTTAAAATTGAATGAATGAAT  850

seq1  GAATGATGAATGAATGAGGGTAAAGTTTAGTAGCAGAACTGTCATTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGAATGAATGAGGGTAAAGTTTAGTAGCAGAACTGTCATTTTTA  900

seq1  CTTGCTTAGATAGAGAAAATAATTTTTTCCCCTGAATGGAGTGATATTGG  950
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTTGCTTAGATAGAG-AAATAATTTTTTCCCCTGAATGGAGTGATATTGG  949

seq1  GTATATCCATTGCTCTAGGACAGGTCTCATGTTCAGAAGTAGTTGACCAA  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTATATCCATTGCTCTAGGACAGGTCTCATGTTCAG-AGTAGTTGACCAA  998

seq1  AAAAGAATGGACTCCACAATATTTTGGTGTGCTTTTATTTATAT-ACAGG  1049
      ||||| |||||||||   ||| |||||||||||||||||||||| |||||
seq2  AAAAG-ATGGACTCCCACATA-TTTGGTGTGCTTTTATTTATATAACAGG  1046

seq1  GTGTAGATTATTTGCTTGTTTTTTGTTGTTGTTCTGTTTTGTTTTACTTT  1099
      ||||||| ||||||||  |||  ||    || ||||||||| ||||| ||
seq2  GTGTAGA-TATTTGCTGTTTTAGTG----TGGTCTGTTTTG-TTTAC-TT  1089

seq1  TAATCTGTTTTGTTGTTTTATTTGGGGATATTGTATTTTGTTCTCTAGTC  1149
      | ||| ||||||||| ||||||  |||||||   ||||||||| | ||  
seq2  TCATC-GTTTTGTTG-TTTATT--GGGATAT--GATTTTGTTC-CCAGAT  1132

seq1  TTTAGCAGTTTTGCTG-ATATATATGTATATATGTTTATACATATATATA  1198
       |||||||   ||| | |||||  |||| |||||||  |||||||||  |
seq2  CTTAGCAG---TGCGGAATATAATTGTA-ATATGTT--TACATATATTAA  1176

seq1  TATATATATATATATATATATGTTTATACATATATATATATATACATATA  1248
      | |||||| |||||||||| ||                            
seq2  TTTATATAAATATATATATGTG----------------------------  1198

seq1  TATATATGTG  1258
                
seq2  ----------  1198

seq1: chr14_113865447_113866510
seq2: B6Ng01-071G10.g_66_1112 (reverse)

seq1  ATTCATGTATTTTAAAAATATTATGTATTTATGTATGTGTGTGCATGTGA  50
      ||||||    ||||||||   || |||||   ||||| ||||||||||||
seq2  ATTCAT---ATTTAAAAA---TAAGTATT--AGTATG-GTGTGCATGTGA  41

seq1  GCCATACACACACATCTGTTATTTTGTGAAAGTGTGCTCAGGTACCTATG  100
      |||||||||||||||||||||||||||| ||||| ||||| ||| |||| 
seq2  GCCATACACACACATCTGTTATTTTGTG-AAGTGGGCTCAAGTA-CTAT-  88

seq1  GACGCCAGTAAAGAGCTTCGAATTCCCTAGAGGTGAAGGTAAAGGCCGTT  150
      |||| |||| |||||||||| |||||||||| ||||||||||||||||||
seq2  GACG-CAGT-AAGAGCTTCG-ATTCCCTAGA-GTGAAGGTAAAGGCCGTT  134

seq1  GAGAGACCCCTGACATGGGTGGTGAGACTCAAGAACAGTGAGCATGCAAT  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGAGACCCCTGACATGGGT-GTGAGACTCAAGAACAGTGAGCATGCAAT  183

seq1  CACTGTGCTATCTCATTTGTCTATGATATATATATATGAATATATATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGCTATCTCATTTGTCTATGATATATATATATGAATATATATGTA  233

seq1  ATTTGTTCTAGTGAATATATATGTATATATTCTGAAAACCAAATTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCTAGTGAATATATATGTATATATTCTGAAAACCAAATTTTTGT  283

seq1  TTTAAAAATTGAATTGTAGCAAACATATTCTTTTGATGAATATTTTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTGAATTGTAGCAAACATATTCTTTTGATGAATATTTTAAGT  333

seq1  AGTTTTCCATCTATATTCTATGTCTATGTATATTTATATGTAATATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCCATCTATATTCTATGTCTATGTATATTTATATGTAATATATTT  383

seq1  ATCTTGTTATATGATGTGTAATCAAATATTGTTGATGGTTGTAAAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTATATGATGTGTAATCAAATATTGTTGATGGTTGTAAAAGAAG  433

seq1  ATATACAAAATTGAAAATACAAAATACACAGAATTTCAATTCTACTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAAATTGAAAATACAAAATACACAGAATTTCAATTCTACTCCAT  483

seq1  ATAGTCTCTTCCATTTTGAGATCTCTAGACATGTCGAAAGAAAGAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTCTTCCATTTTGAGATCTCTAGACATGTCGAAAGAAAGAATGTT  533

seq1  CCAAAAGCATACTGGCTAATTTTAGTTATAATTTGTGTCTTAATTTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGCATACTGGCTAATTTTAGTTATAATTTGTGTCTTAATTTGAGG  583

seq1  GAAATGTAGTTTAATCAACAACTTAACTTATGTTAAAGATAAGTTTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAGTTTAATCAACAACTTAACTTATGTTAAAGATAAGTTTAAAG  633

seq1  ACTATACATAAATTATTTTACCTAGAAAAAAACTGTTCCTATATTGTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACATAAATTATTTTACCTAGAAAAAAACTGTTCCTATATTGTAAG  683

seq1  AAATTACATAATAATTTTATTCATGTGAATTTTAAGGTGTCTTGTTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACATAATAATTTTATTCATGTGAATTTTAAGGTGTCTTGTTATGG  733

seq1  TAACCAAGCCGGCCTGAAACTATGTGCTAGGTTGTGTTCAAGTTTTTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGCCGGCCTGAAACTATGTGCTAGGTTGTGTTCAAGTTTTTAAC  783

seq1  AACCCTACTGTCTCTGTTAATCAAGTGTTGGGATTACAGTCATGAGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTACTGTCTCTGTTAATCAAGTGTTGGGATTACAGTCATGAGACAT  833

seq1  TGAGCCCAGTCAATAAACTTATATTTCACAAGAAATAAGTAAATCCACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCAGTCAATAAACTTATATTTCACAAGAAATAAGTAAATCCACTG  883

seq1  TCTTAATGTAAAAACTGTACTTAAGAAATTGGAATAGGATCTTTACCTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGTAAAAACTGTACTTAAGAAATTGGAATAGGATCTTTACCTAT  933

seq1  TCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCAGATAGGGGACTAATATCCAATATATATAAAGAACTCAAGAA  983

seq1  GGTGGACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGC  1033

seq1  TAAACAAAGAATTC  1064
      ||||||||||||||
seq2  TAAACAAAGAATTC  1047