BAC Information

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BAC

Clone NameB6Ng01-071M12
Chromosome14 (Build37)
Map Location 95,708,561 - 95,845,638
singlet/doubletdoublet
Overlap geneLOC100043784, LOC382931
Upstream geneLOC100043783, LOC677613
Downstream gene4921530L21Rik, Klhl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071M12.bB6Ng01-071M12.g
ACCDH889382DH889383
length992407
definitionDH889382|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M12, 5' end.DH889383|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,844,637 - 95,845,638)(95,708,561 - 95,708,975)
sequence
gaattcatgatttttaaaaaatatacctcttgctacatgatgcactgtct
actctaaaatcaggaagttatttctagatgtgaagaagtatatttaaaca
aattacactgactctaagtcaaatgaagtgctggtccgcttatgagaaga
tatcagacccatgtaaggagagcttcaaatagttctttaaattgggaagt
acaagaatccaaagaagtaacacctttgaaaacatttccaggatacaaat
cctcagttggtctaaaagattttagagttgacctatcaggatgaaaagta
atcaggcaagagtatatggacagataaaaatgctaggaaaatataaaagg
agaaaggaggcaaaagtctaacttatgcctctaaagctcaggattctaaa
aaaaataaaaaataaaaagactttatcaagaccaacatttctaggaactc
agtagatgaaagggaagtctgcatgtttggcttttgtgactcacctttct
tattcctgtactttgtaccctaaaagacatgctatccaactgcagaatct
gagatttgaagatcacagttttagtaaaatatcaactattttattactag
aatggatacataataacattgatccatatctttacatacatattgtatca
tgaaaaatacacatattaacatgggtattgtcttggttactggtctattg
ctgtgaagagacacaatggagacggtacctcataaaccagtgcattgtag
tgagagtgataactggttcttaggtaggagtaaaatgtatcatgtattca
tggaaaaatgctccatcctaacagattctcaaacttttatctctataatg
gcatcattttgacctaacacgctttggtcaatcctattttaaacaaagta
gagtccatagatactttctgtgaatcaaagatcacacagatctgaatatg
ttgcacagtaagagttatatcattgactgcatactcttctgg
ctggagaaattcaaaggagaaagctcatggagcaacactgacttctgatt
tcctgtttgtagatgcagtgtgattaagtccctacaggtcctgctgctgt
gtgttctctgcactgatgtgctgtcatccttgaaatcggaacaccttgcc
ctctgctaactttatcttttaagaatataattaaattttaacatttattc
cttccttttcttccctccaaattgcctcaaatgccctttccactcttctt
acaatgcatagccaatttttcattagttgttattgcaagcatatgtgtat
ttgtgtgtgtgtatatacacatatatttttatacatatacaaattattta
tatatatatgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_95844637_95845638
seq2: B6Ng01-071M12.b_44_1035 (reverse)

seq1  CCAGAAGAAGTAATGCAGTTCAATGAATATAAACTCTTTACTGTGGAAAC  50
      ||||||| ||| |||||| |||||| |||| ||||| ||||||| | |||
seq2  CCAGAAG-AGT-ATGCAG-TCAATG-ATAT-AACTC-TTACTGT-GCAAC  43

seq1  ATATTTAGATCTGTGTGATCTTTTGATTCACAGAAAGTATCTATGGGACT  100
      ||||| |||||||||||||| ||||||||||||||||||||||| |||||
seq2  ATATTCAGATCTGTGTGATC-TTTGATTCACAGAAAGTATCTAT-GGACT  91

seq1  CTACTTTTGTTTAAAATAGGATTGACCAAAGCCTGTTAGGTCAAAATGAT  150
      |||| ||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTAC-TTTGTTTAAAATAGGATTGACCAAAGCGTGTTAGGTCAAAATGAT  140

seq1  GCCATTATAGAGATAAAAGTTTGAGAATCTGTTAGGATGGAGCATTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTATAGAGATAAAAGTTTGAGAATCTGTTAGGATGGAGCATTTTTC  190

seq1  CATGAATACCTGATACATTTTACTCCTACCTAAGAACCAGTTATCACTCT  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATACATGATACATTTTACTCCTACCTAAGAACCAGTTATCACTCT  240

seq1  CACTACAATGCACTGGTTTATGAGGTACCGTCTCCATTGTGTCTCTTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAATGCACTGGTTTATGAGGTACCGTCTCCATTGTGTCTCTTCAC  290

seq1  AGCAATAGACCAGTAACCAAGACAATACCCATGTTAATATGTGTATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAGACCAGTAACCAAGACAATACCCATGTTAATATGTGTATTTTT  340

seq1  CATGATACAATATGTATGTAAAGATATGGATCAATGTTATTATGTATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATACAATATGTATGTAAAGATATGGATCAATGTTATTATGTATCCA  390

seq1  TTCTAGTAATAAAATAGTTGATATTTTACTAAAACTGTGATCTTCAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTAATAAAATAGTTGATATTTTACTAAAACTGTGATCTTCAAATC  440

seq1  TCAGATTCTGCAGTTGGATAGCATGTCTTTTAGGGTACAAAGTACAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTCTGCAGTTGGATAGCATGTCTTTTAGGGTACAAAGTACAGGAA  490

seq1  TAAGAAAGGTGAGTCACAAAAGCCAAACATGCAGACTTCCCTTTCATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGGTGAGTCACAAAAGCCAAACATGCAGACTTCCCTTTCATCTA  540

seq1  CTGAGTTCCTAGAAATGTTGGTCTTGATAAAGTCTTTTTATTTTTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCCTAGAAATGTTGGTCTTGATAAAGTCTTTTTATTTTTTATTT  590

seq1  TTTTTAGAATCCTGAGCTTTAGAGGCATAAGTTAGACTTTTGCCTCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAATCCTGAGCTTTAGAGGCATAAGTTAGACTTTTGCCTCCTTT  640

seq1  CTCCTTTTATATTTTCCTAGCATTTTTATCTGTCCATATACTCTTGCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTATATTTTCCTAGCATTTTTATCTGTCCATATACTCTTGCCTG  690

seq1  ATTACTTTTCATCCTGATAGGTCAACTCTAAAATCTTTTAGACCAACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTTCATCCTGATAGGTCAACTCTAAAATCTTTTAGACCAACTGA  740

seq1  GGATTTGTATCCTGGAAATGTTTTCAAAGGTGTTACTTCTTTGGATTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGTATCCTGGAAATGTTTTCAAAGGTGTTACTTCTTTGGATTCTT  790

seq1  GTACTTCCCAATTTAAAGAACTATTTGAAGCTCTCCTTACATGGGTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCCCAATTTAAAGAACTATTTGAAGCTCTCCTTACATGGGTCTGA  840

seq1  TATCTTCTCATAAGCGGACCAGCACTTCATTTGACTTAGAGTCAGTGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTCATAAGCGGACCAGCACTTCATTTGACTTAGAGTCAGTGTAA  890

seq1  TTTGTTTAAATATACTTCTTCACATCTAGAAATAACTTCCTGATTTTAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAAATATACTTCTTCACATCTAGAAATAACTTCCTGATTTTAGA  940

seq1  GTAGACAGTGCATCATGTAGCAAGAGGTATATTTTTTAAAAATCATGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAGTGCATCATGTAGCAAGAGGTATATTTTTTAAAAATCATGAAT  990

seq1  TC  1002
      ||
seq2  TC  992

seq1: chr14_95708561_95708975
seq2: B6Ng01-071M12.g_66_478

seq1  GAATTCCTGGTCCAAATTCAAAGGAGAAAGCTCATGGAGCAACACTGACT  50
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGG-AGAAATTCAAAGGAGAAAGCTCATGGAGCAACACTGACT  49

seq1  TCTCCACTTCCTGTTTGTAGATGCAGTGTGATTAAGTCCCTACAGGTCCT  100
      |||  | |||||||||||||||||||||||||||||||||||||||||||
seq2  TCT-GATTTCCTGTTTGTAGATGCAGTGTGATTAAGTCCCTACAGGTCCT  98

seq1  GCTGCTGTGTGTTCTCTGCACTGATGTGCTGTCATCCTTGAAATCGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTGTGTTCTCTGCACTGATGTGCTGTCATCCTTGAAATCGGAAC  148

seq1  ACCTTGCCCTCTGCTAACTTTATCTTTTAAGAATATAATTAAATTTTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCCCTCTGCTAACTTTATCTTTTAAGAATATAATTAAATTTTAAC  198

seq1  ATTTATTCCTTCCTTTTCTTCCCTCCAAATTGCCTCAAATGCCCTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCCTTCCTTTTCTTCCCTCCAAATTGCCTCAAATGCCCTTTCCA  248

seq1  CTCTTCTTACAATGCATAGCCAATTTTTCATTAGTTGTTATTGCAAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTACAATGCATAGCCAATTTTTCATTAGTTGTTATTGCAAGCAT  298

seq1  ATGTGTATTTGTGTGTGTGTATATACACATATATTTTTATACATATACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATTTGTGTGTGTGTATATACACATATATTTTTATACATATACAA  348

seq1  ATTATTTATATATATATGTGTGTGTTTGTGTCTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATATATATATGTGTGTGTTTGTGTCTGTGTGTGTGTGTGTGTG  398

seq1  TGTGTGTGTGTGTAT  415
      |||||||||||||||
seq2  TGTGTGTGTGTGTAT  413