BAC Information

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BAC

Clone NameB6Ng01-072C04
Chromosome14 (Build37)19 (Build37)
Map Location 86,218,347 - 86,218,91239,404,614 - 39,405,589
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072C04.bB6Ng01-072C04.g
ACCDH889633DH889634
length996975
definitionDH889633|Mus musculus domesticus DNA, BAC clone: B6Ng01-072C04, 5' end.DH889634|Mus musculus domesticus DNA, BAC clone: B6Ng01-072C04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(86,218,347 - 86,218,912)(39,404,614 - 39,405,589)
sequence
gaattctgtaggcttcttgtatgttcatgggcatctctttctttagattt
gagaagttttcttctataattttgttgaagatatttgctgttcctttaag
ttgaaaatcttcattctcatctactcctattatccgtaggtttggtcttc
tcattgtgtcctggatttcctggatattttgagttaggatctttttgcat
tttcaatttttctttgattgttgtgccgatgttctctatggaatcttctg
cacctgagattcttccatctcttgtattctgttgctgatgctgtcatcta
catttccagattattttcttgtgtttctatctccagcgttgcttcacctt
gggttttctttattgtgtccacttccctttttaggtctagtatggttttt
ttcatttatgtcatctgtttggatgtgttgtcctgtttttctttaaggac
ttgtaactctttagcagtgttctcttgaatttctttaagtgtgttattaa
agtccttcttgatgtcctctaccatgagatatgcctttaaatccgtgtct
agcttttcatgcgtgttgaggtacccagaactggctcaattgtgagtgct
gggttctgatgatggtgagtggtcttggtttctgttaataagatttttat
gtctgcctttcgccatctggtaatttctggagtcagttgtcatatttgtc
tctggttagatcttgttcctctcatgattctgttagcctctaccagcaga
cctgggagactagatctctcctgagtttcagtggttagagcactctctgc
aggcaagctctcctcttgcagagaaagtgcacagacatctgttgtttgat
ctgcctccctacagataatgaaaggcctttaacaaggtctgtctcagaag
ctgttagcttctgtggtccataatctcacttgtgcagactagtcttggca
gtatccgggaaccaagatgtctctggcagatgttcagcaacagctt
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatactaaacc
atccctgcatccctggaataaaacctacctggtcaggatggatgacaaaa
gcactttattgagcgatatatatccctagcatttcgttttgcattctcta
tgcttcttttgatgtgaaccagaatgttgtgttaggatacaattttctaa
cctaaattttaagcaagtctgagaacaggtacacaaattaaatataacta
ttattgaaaatatgcaaaagaaaaaatgactcagaattatcttatgatag
ttatttttctttacagtgaagctttatttttactcaagaatggatacaca
taaacacaaggaatcagaaaactgttatataaaagagaaaatacaagtgc
atttgtactataactccagaaactgtatgtgtttgctgggtcttgagaga
agagggttctgtaagccaggatgaaagataccatatccctgatagggagg
gatgtggataaagacctgagacaattgtagaaggcatcacagcaggggcc
agaaagtctgatctctttagagaggaatgaagcagagctggtaagggggt
ggcagagaggcaaatccattcatcactggggtaatatcaatttcttttgg
gtggaccagagatttcagtttgaagttctgtaaaatggttgtcaggatta
gaaacagctccatgcgggccaggccctctccagcacaaatccgttttcct
agaaaaaaaaaaaagtcaaagaagattactatctcttattcataaatgtg
tgaatcattgtacttgtaactgacacagaattgataattgagtagtatag
tgtataggtgattagatggatggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86218347_86218912
seq2: B6Ng01-072C04.b_48_602 (reverse)

seq1  GAAAAGCTAGACCCGGATTTAAAAGCATATCTCATGATGATGGTAGAGGA  50
      |||||||||||| |||||||||| |||||||||      |||||||||||
seq2  GAAAAGCTAGACACGGATTTAAAGGCATATCTC------ATGGTAGAGGA  44

seq1  CATCAAGAAGGACTTTAATAACTCACTTAAAGAAATACAGGAGAACACTG  100
      |||||||||||||||||||||| ||||||||||||| || ||||||||||
seq2  CATCAAGAAGGACTTTAATAACACACTTAAAGAAATTCAAGAGAACACTG  94

seq1  CTAAAGAATTACAAGTCCTTAAAGAAAAACAGGAAAACACATCCAAAACA  150
      ||||||| |||||||||||||||||||||||||| ||||||||| |||||
seq2  CTAAAGAGTTACAAGTCCTTAAAGAAAAACAGGACAACACATCC-AAACA  143

seq1  GGTAACGGAAATGAACAAAACCATACTAGTCATAAAAAGGGAAATAGACA  200
      | | ||  ||||||| ||||||||||||| | ||||||||||| | ||||
seq2  GATGACATAAATGAAAAAAACCATACTAGACCTAAAAAGGGAAGTGGACA  193

seq1  CAATAAAGAAAACTCAAAGTGAGGCAATGCTGGAGATAGAAACCCTAGGA  250
      ||||||||||||| ||| |||| |||| ||||||||||||||| | | ||
seq2  CAATAAAGAAAACCCAAGGTGAAGCAACGCTGGAGATAGAAACAC-AAGA  242

seq1  AAGAAATCTGGAACCATAGATGCGAGTAACAGCAACAGAATACAAGAGAT  300
      ||  |||||||||   ||||||  || | |||||||||||||||||||||
seq2  AAATAATCTGGAAATGTAGATGACAGCATCAGCAACAGAATACAAGAGAT  292

seq1  GAAAGAGAGAATCTCAGCTTCAGAAGATTCCATAGAGAACATCGGCACAA  350
      | |    |||||||||| | ||||||||||||||||||||||||||||||
seq2  GGA----AGAATCTCAGGTGCAGAAGATTCCATAGAGAACATCGGCACAA  338

seq1  CAATCAAAG-AAAATGGAAAATGCAAAAAGATCCTAACTCAAAACATATA  399
      ||||||||| ||||| |||||||||||||||||||||||||||| ||  |
seq2  CAATCAAAGAAAAATTGAAAATGCAAAAAGATCCTAACTCAAAATATCCA  388

seq1  GGAAATCCAGGACACAATGAGAAGACCAAACCTACGGATAATAGGAGTGG  449
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGAAATCCAGGACACAATGAGAAGACCAAACCTACGGATAATAGGAGTAG  438

seq1  ATGAGAATGAGGATTTTCAACTCAAAGGACCAGCAGATATCTTCAACAAA  499
      |||||||||| ||||||||||| |||||| ||||| ||||||||||||||
seq2  ATGAGAATGAAGATTTTCAACTTAAAGGAACAGCAAATATCTTCAACAAA  488

seq1  ATTATAGAAGAAAACTTCCCAAATCTAAAGAAAGAGATGCCCATGAACAT  549
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATTATAGAAGAAAACTTCTCAAATCTAAAGAAAGAGATGCCCATGAACAT  538

seq1  ACAAGAAGCCTACAGAA  566
      |||||||||||||||||
seq2  ACAAGAAGCCTACAGAA  555

seq1: chr19_39404614_39405589
seq2: B6Ng01-072C04.g_66_1040 (reverse)

seq1  AGCCATCCATCTAATCACCTATACACCTATACTACTCAATTATCAATTCT  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCCATCCATCTAATCACCTATACA-CTATACTACTCAATTATCAATTCT  49

seq1  GTGTCAGTTACAAGTACAATGATTCACACATTTATGAATAAGAGATAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGTTACAAGTACAATGATTCACACATTTATGAATAAGAGATAGTA  99

seq1  ATCTTCTTTGACTTTTTTTTTTTTCTAGGAAAACGGATTTGTGCTGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTTGACTTTTTTTTTTTTCTAGGAAAACGGATTTGTGCTGGAGA  149

seq1  GGGCCTGGCCCGCATGGAGCTGTTTCTAATCCTGACAACCATTTTACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGGCCCGCATGGAGCTGTTTCTAATCCTGACAACCATTTTACAGA  199

seq1  ACTTCAAACTGAAATCTCTGGTCCACCCAAAAGAAATTGATATTACCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAACTGAAATCTCTGGTCCACCCAAAAGAAATTGATATTACCCCA  249

seq1  GTGATGAATGGATTTGCCTCTCTGCCACCCCCTTACCAGCTCTGCTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAATGGATTTGCCTCTCTGCCACCCCCTTACCAGCTCTGCTTCAT  299

seq1  TCCTCTCTAAAGAGATCAGACTTTCTGGCCCCTGCTGTGATGCCTTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTAAAGAGATCAGACTTTCTGGCCCCTGCTGTGATGCCTTCTAC  349

seq1  AATTGTCTCAGGTCTTTATCCACATCCCTCCCTATCAGGGATATGGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTCAGGTCTTTATCCACATCCCTCCCTATCAGGGATATGGTATC  399

seq1  TTTCATCCTGGCTTACAGAACCCTCTTCTCTCAAGACCCAGCAAACACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCTGGCTTACAGAACCCTCTTCTCTCAAGACCCAGCAAACACAT  449

seq1  ACAGTTTCTGGAGTTATAGTACAAATGCACTTGTATTTTCTCTTTTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCTGGAGTTATAGTACAAATGCACTTGTATTTTCTCTTTTATAT  499

seq1  AACAGTTTTCTGATTCCTTGTGTTTATGTGTATCCATTCTTGAGTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTCTGATTCCTTGTGTTTATGTGTATCCATTCTTGAGTAAAAA  549

seq1  TAAAGCTTCACTGTAAAGAAAAATAACTATCATAAGATAATTCTGAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTTCACTGTAAAGAAAAATAACTATCATAAGATAATTCTGAGTCA  599

seq1  TTTTTTCTTTTGCATATTTTCAATAATAGTTATATTTAATTTGTGTACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTGCATATTTTCAATAATAGTTATATTTAATTTGTGTACCT  649

seq1  GTTCTCAGACTTGCTTAAAATTTAGGTTAGAAAATTGTATCCTAACACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGACTTGCTTAAAATTTAGGTTAGAAAATTGTATCCTAACACAA  699

seq1  CATTCTGGTTCACATCAAAAGAAGCATAGAGAATGCAAAACGAAATGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGTTCACATCAAAAGAAGCATAGAGAATGCAAAACGAAATGCTA  749

seq1  GGGATATATATCGCTCAATAAAGTGCTTTTGTCATCCATCCTGACCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATATATCGCTCAATAAAGTGCTTTTGTCATCCATCCTGACCAGGT  799

seq1  AGGTTTTATTCCAGGGATGCAGGGATGGTTTAGTATACGAAAATCCATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTATTCCAGGGATGCAGGGATGGTTTAGTATACGAAAATCCATCA  849

seq1  ATGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATC  899

seq1  TCGTTAGATGCAGAAAAAGCATTCGACAAGATCCAACACCCATTCATGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAGATGCAGAAAAAGCATTCGACAAGATCCAACACCCATTCATGAT  949

seq1  AAAAGTCTTGGAAAGATCAGGAATTC  976
      ||||||||||||||||||||||||||
seq2  AAAAGTCTTGGAAAGATCAGGAATTC  975