BAC Information

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BAC

Clone NameB6Ng01-073C01
Chromosome14 (Build37)
Map Location 69,888,160 - 69,997,231
singlet/doubletdoublet
Overlap geneSlc25a37, D930020E02Rik, Entpd4
Upstream geneAdam7, Adamdec1, Adam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1
Downstream geneLoxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073C01.bB6Ng01-073C01.g
ACCDH890350DH890351
length6121,167
definitionDH890350|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C01, 5' end.DH890351|Mus musculus domesticus DNA, BAC clone: B6Ng01-073C01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,996,620 - 69,997,231)(69,888,160 - 69,889,315)
sequence
gaattcccaatccatttcctgactctcttgctctctggcttaagctccct
agcatgccttatattgtgttctgatttctttcttactagaaggtaagctc
cgccaggccccagttttctttcttttaatcttctctttctcctcactgtt
atttcaagtacccagcacccagtctgtgtgttgaatgagtaaatggactt
ttttgatgtctctgactcttactactgtctcttaggtcctcaggacagtc
agaaagctttcccttcttaaaccaagtccaaaagcaatactaacaaaact
aaatgtatgtcttactgcattagaattaaaaactatccataaaactgagc
ctcaagaaagtggagctaaaaaaagggagataatacttgttaagaagcat
aagccaaaaggacgaaagccaagtgttcagaagttccgacccacatacct
gaaagaacaacttaaggaagaaatgattcattttgactcaaggttttaga
aagtttaatcatggttggttcgctctgtggctatggtgaagcttaaaatc
atagtgtgagggagattagaaagagaaggctgcccatatttggggggaga
gggagagggaga
gaattcagggtcaaggcaggcccaaaatgggacgagagcagttggctccc
ctcccagaatgcactacaagcagtcctgcctcccagctttcttcttgagg
tagaatggctctggctagaagtctacatttgtggccaagtgtattcagag
aacctagaagtcacagtgtcccaaggcacagagaggccatgagttcaagt
catacttgctgctcagtcaatgcatccctggtcaccttgcacctgcaagt
aaacacaggcttctcttcgcttctttgaagtccctccctccaggatgaaa
aagccctgcccagtgcttcctggtcccttcatccaagctgctctgagagc
agacatctgttctcaattgcacagtagctcctgagaacagcccagctttg
caagaacttttgatgtccagggtctgacagagaattccaggaacaaaacg
caaagagcaaggtctgcaacatgtcaccatacagacaggggcctgcttac
aagcctgaaagggtcaacagagcccactgctacctgtagtcatggcgcta
tgcatcccatattgcaatttcaatgtctccaactccaatccaaacttgca
agggtctgtcagaagtaaacaagcagctaagagttagtcccattcgcaga
ctgtgagagttgccctatatataattaaaggccatttctgagctgacacc
ttcaaagctctaagatacacgtacgacaatcttcaataattctggaatcg
agtttgttgagcctttccttccttcccggcatgcacaagtgctttagtac
tcaaggtgggcctggaaaagctaagagaccgaagaggtgaaacatggttt
catgtacagtttcattaagggggtgctctagggctgtggggaaaacaact
cgtgggcaaagtgcttttcatcacaagcacaaggtccagggtttagatcc
cagactctaaggtaaatgctggaacagacgcgtggttcatctataactca
gcacaagggaagtgggggacagtgccctccaggagaaaggttgcctaact
ggatttagattttgttcaatgagaggctctggggggttcaactggaaaga
cccttgcctcaaaaattaattgagactattaagggggtacctggacattc
ataccctcaagtctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_69996620_69997231
seq2: B6Ng01-073C01.b_40_651 (reverse)

seq1  TCTCCCTCTCCCTCTCCCCCCAAATATGGGCAGCCTTCTCTTTCTAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCCCTCTCCCCCCAAATATGGGCAGCCTTCTCTTTCTAATCT  50

seq1  CCCTCACACTATGATTTTAAGCTTCACCATAGCCACAGAGCGAACCAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACACTATGATTTTAAGCTTCACCATAGCCACAGAGCGAACCAACC  100

seq1  ATGATTAAACTTTCTAAAACCTTGAGTCAAAATGAATCATTTCTTCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAACTTTCTAAAACCTTGAGTCAAAATGAATCATTTCTTCCTTA  150

seq1  AGTTGTTCTTTCAGGTATGTGGGTCGGAACTTCTGAACACTTGGCTTTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTCTTTCAGGTATGTGGGTCGGAACTTCTGAACACTTGGCTTTCG  200

seq1  TCCTTTTGGCTTATGCTTCTTAACAAGTATTATCTCCCTTTTTTTAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGGCTTATGCTTCTTAACAAGTATTATCTCCCTTTTTTTAGCTC  250

seq1  CACTTTCTTGAGGCTCAGTTTTATGGATAGTTTTTAATTCTAATGCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTTGAGGCTCAGTTTTATGGATAGTTTTTAATTCTAATGCAGTA  300

seq1  AGACATACATTTAGTTTTGTTAGTATTGCTTTTGGACTTGGTTTAAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATACATTTAGTTTTGTTAGTATTGCTTTTGGACTTGGTTTAAGAAG  350

seq1  GGAAAGCTTTCTGACTGTCCTGAGGACCTAAGAGACAGTAGTAAGAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCTTTCTGACTGTCCTGAGGACCTAAGAGACAGTAGTAAGAGTCA  400

seq1  GAGACATCAAAAAAGTCCATTTACTCATTCAACACACAGACTGGGTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATCAAAAAAGTCCATTTACTCATTCAACACACAGACTGGGTGCTG  450

seq1  GGTACTTGAAATAACAGTGAGGAGAAAGAGAAGATTAAAAGAAAGAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTGAAATAACAGTGAGGAGAAAGAGAAGATTAAAAGAAAGAAAAC  500

seq1  TGGGGCCTGGCGGAGCTTACCTTCTAGTAAGAAAGAAATCAGAACACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTGGCGGAGCTTACCTTCTAGTAAGAAAGAAATCAGAACACAAT  550

seq1  ATAAGGCATGCTAGGGAGCTTAAGCCAGAGAGCAAGAGAGTCAGGAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCATGCTAGGGAGCTTAAGCCAGAGAGCAAGAGAGTCAGGAAATG  600

seq1  GATTGGGAATTC  612
      ||||||||||||
seq2  GATTGGGAATTC  612

seq1: chr14_69888160_69889315
seq2: B6Ng01-073C01.g_70_1236

seq1  GAATTCAGGGACAAGGCAGGCCCAAAATGGGACGAGAGCAGTTGGCTCCC  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGTCAAGGCAGGCCCAAAATGGGACGAGAGCAGTTGGCTCCC  50

seq1  CTCCCAGAATGCACTACAAGCAGTCCTGCCTCCCAGCTTTCTTCTTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGAATGCACTACAAGCAGTCCTGCCTCCCAGCTTTCTTCTTGAGG  100

seq1  TAGAATGGCTCTGGCTAGAAGTCTACATTTGTGGCCAAGTGTATTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGGCTCTGGCTAGAAGTCTACATTTGTGGCCAAGTGTATTCAGAG  150

seq1  AACCTAGAAGTCACAGTGTCCCAAGGCACAGAGAGGCCATGAGTTCAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGAAGTCACAGTGTCCCAAGGCACAGAGAGGCCATGAGTTCAAGT  200

seq1  CATACTTGCTGCTCAGTCAATGCATCCCTGGTCACCTTGCACCTGCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTGCTGCTCAGTCAATGCATCCCTGGTCACCTTGCACCTGCAAGT  250

seq1  AAACACAGGCTTCTCTTCGCTTCTTTGAAGTCCCTCCCTCCAGGATGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGGCTTCTCTTCGCTTCTTTGAAGTCCCTCCCTCCAGGATGAAA  300

seq1  AAGCCCTGCCCAGTGCTTCCTGGTCCCTTCATCCAAGCTGCTCTGAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTGCCCAGTGCTTCCTGGTCCCTTCATCCAAGCTGCTCTGAGAGC  350

seq1  AGACATCTGTTCTCAATTGCACAGTAGCTCCTGAGAACAGCCCAGCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCTGTTCTCAATTGCACAGTAGCTCCTGAGAACAGCCCAGCTTTG  400

seq1  CAAGAACTTTTGATGTCCAGGGTCTGACAGAGAATTCCAGGAACAAAACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACTTTTGATGTCCAGGGTCTGACAGAGAATTCCAGGAACAAAACG  450

seq1  CAAAGAGCAAGGTCTGCAACATGTCACCATACAGACAGGGGCCTGCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCAAGGTCTGCAACATGTCACCATACAGACAGGGGCCTGCTTAC  500

seq1  AAGCCTGAAAGGGTCAACAGAGCCCACTGCTACCTGTAGTCATGGCGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGAAAGGGTCAACAGAGCCCACTGCTACCTGTAGTCATGGCGCTA  550

seq1  TGCATCCCATATTGCAATTTCAATGTCTCCAACTCCAATCCAAACTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCATATTGCAATTTCAATGTCTCCAACTCCAATCCAAACTTGCA  600

seq1  AGGGTCTGTCAGAAGTAAACAAGCAGCTAAGAGTTAGTCCCATTCGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTGTCAGAAGTAAACAAGCAGCTAAGAGTTAGTCCCATTCGCAGA  650

seq1  CTGTGAGAGTTGCCCTATATATAATTAAAGGCCATTTCTGAGCTGACACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGAGTTGCCCTATATATAATTAAAGGCCATTTCTGAGCTGACACC  700

seq1  TTCAAAGCTCTAAGATACACGTACGACAATCTTCAATAATTCTGGAATCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCTCTAAGATACACGTACGACAATCTTCAATAATTCTGGAATCG  750

seq1  AGTTTGTTGAGCCTTTCCTTCCTTCCCGGCATGCACAAGTGC-TTAGTAC  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTTTGTTGAGCCTTTCCTTCCTTCCCGGCATGCACAAGTGCTTTAGTAC  800

seq1  TC-AGGTGGGCCTGGAAAAGCTAAGAGACCGAAGAGG-GAAACATGGTTT  847
      || |||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAAGGTGGGCCTGGAAAAGCTAAGAGACCGAAGAGGTGAAACATGGTTT  850

seq1  CATGTACAGTTTCATTAAGGGGGTGCTCTAGGGCTGTGGGGAAAACAACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACAGTTTCATTAAGGGGGTGCTCTAGGGCTGTGGGGAAAACAACT  900

seq1  CCATGGGCAAAGTGCTTTCCA-CACAAGCACAAGGACCAGGGTTCAGATC  946
       | ||||||||||||||| || ||||||||||||| |||||||| |||| 
seq2  -CGTGGGCAAAGTGCTTTTCATCACAAGCACAAGGTCCAGGGTTTAGAT-  948

seq1  CCCAGACTCTTAGGTAAATGCTGG-ACAGACGCGGTGGTCCATCTATAAC  995
      |||||||||| ||||||||||||| |||||||| ||||| ||||||||| 
seq2  CCCAGACTCTAAGGTAAATGCTGGAACAGACGC-GTGGTTCATCTATAA-  996

seq1  CTCAGCACAAGGGAAGT-GGGGACAGTGGCCCTCAGGAG-AAGGCTGCCT  1043
      ||||||||||||||||| |||||||||| ||  |||||| |||| |||||
seq2  CTCAGCACAAGGGAAGTGGGGGACAGTGCCCTCCAGGAGAAAGGTTGCCT  1046

seq1  AACTGGA-TTAGATAT--GTCAATGAGAAAGCTCTGGGGGG-TCAACT-G  1088
      ||||||| |||||| |   |||||||| | ||||||||||| |||||| |
seq2  AACTGGATTTAGATTTTGTTCAATGAG-AGGCTCTGGGGGGTTCAACTGG  1095

seq1  AGAGACCC-TGCCTCAAAATATAATTGAG-CAATTAAGGGGGGTCACTGG  1136
      | |||||| ||||||||||  |||||||| | ||||| ||||||  ||||
seq2  AAAGACCCTTGCCTCAAAAATTAATTGAGACTATTAA-GGGGGTACCTGG  1144

seq1  ACAT---CAACCTCAAGTCTCCA  1156
      ||||    | |||||||||||||
seq2  ACATTCATACCCTCAAGTCTCCA  1167