BAC Information

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BAC

Clone NameB6Ng01-073F03
Chromosome14 (Build37)
Map Location 43,820,252 - 43,821,480
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666233, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454
Downstream geneLOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073F03.bB6Ng01-073F03.g
ACCDH890486DH890487
length1,2021,212
definitionDH890486|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F03, 5' end.DH890487|Mus musculus domesticus DNA, BAC clone: B6Ng01-073F03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagccaaaccttgtcaataaacagtgaatgatttatgaataga
tgggaaacttcatggtgcatgcagaattcagagttctggtctcaggaagt
aaagaatttttcttgaatggaaacactacaaaactctcagtagagttcag
gaaaaggtggatgggcctcattcttactttgggcctattgtacccaaata
cagggagggattcatccctatactatttgattggaatgcctgctgcattg
ctctccaggctcagagataatcagctacccaaaatataactattgctttt
tcattacctattttctccagttctccataaaggttattcatctgactacc
tgagagacagagtgggcttctgactaccccaccatccccccagacacctt
ggaccaatgtcatagtgatattgcatagctcaagatggtagacaaagaca
acacaatcaatttggaaaggctttacatgatttttccactattttactgg
agagtttaggtagcattttagcatgcattcagcacacggaggtcaagaag
gcagaaggaacaaatgtcaatgccaaagagagcccctcctgaaattatgg
atccattaaaattgaggtttcactggacccgaggcctgttcatcctctat
ccatccaattgagtcttaggtatcttatgaatacaggatcatattccaat
ctccaacagactcaggcctagaactgggaactcaaaaaggtagaaactgg
agaagtgagagctaatgggactacgaagaagcaatccaatgtccctgttg
gcctttgttcacagatgcctatcttgtctggttgttttggagaaagagag
attgtgggattttagcttttgaagaaggatataaactttacaatttgatg
ttgcccctgtccctgacttcttctatgccaagtacagttagtttcattgc
aaagaaatggggtgtaaatcagagatttcatgaaacccatggctcacttt
atgaaacatgtctctctcagcagtgccactaaaaaataatactcaacttg
tgtaagtaaaggtacagaagtaagtttctgttcctctggaaacaagaacc
ctggttatcgactgttatatgatgaccatagtacatttatatggagagaa
ttccctaaatagatcctatagaaagtgagcctagccatgccatgacctaa
ca
gaattccacgggcctatgtttaggagtctggggacagggacccacaaaat
cctggacatccagacagtgctgggttgcagagagttcacagcaggtttga
ccctgctggcctgcaaggataactgggcaaggggttctcagaatcttgga
catgcaggcactgctagaagtctcagaggagctgagcatggaggaggcca
gcaggctaagaactagccctgaaatcagggaatgggaaattctggattag
ctcagaggtgactagcccaggagtattgaggggcctgctgatggagactt
agatggcaagactctgtaggcaaaggctttttctccatgtaacccacagt
tggtttgatgagagagacagtccttggttgtaaactgtttattgattgtt
tttcatggaaatgaaagcataacatgtcttaaggttagactagaagttaa
gtaacttctgaggaaggaatgtccaggaagggaagcttattgactgaacc
ctaccatcttctattacctcattagcagggagaaccctattctcttctaa
ataaccacaggccatgttcctatatacagattttggtcccatgaaagagg
cctggtaggaagcaggtaacacttttgccatttctgtgggtctgggacat
ctaacccactcaactttaccaaattctggacatggtagtctactgtccca
ggtgttagtttgagatttattgatgtgaggagacaccaggtcatatgttt
agtatgcgggtctcaatgcctaccctccacactgacacactgtttctaac
aaggccacaactccttaacgtaccactcacatattcaagccaccacactc
ctctgcaatctcccaagacatttacctcactctgtcctactgttttcctt
tttctccttcacatttatgtgttctatattttcttgaaattatcctccta
taacccaacactagtgcattaccttctatggatactgcagtttaaatgca
catctcctagacattcaatgtaccatccacataagacacatgatggtggt
tttgtctttttgggtctgggttaattcactcaaaattattcatgtgtgcc
atccattacctgaaattctatttatttgcctaggtctttaccatttgtat
atgaccatgtcacccattatcctcacggttatttatgtctcgtgtttgat
gtcctgacattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43820252_43821480
seq2: B6Ng01-073F03.g_68_1279

seq1  GAATTCCACGGGCCTATGTTTAGGAGTCTGGGGACAGGGACCCACAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGGGCCTATGTTTAGGAGTCTGGGGACAGGGACCCACAAAAT  50

seq1  CCTGGACATCCAGACAGTGCTGGGTTGCAGAGAGTTCACAGCAGGTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACATCCAGACAGTGCTGGGTTGCAGAGAGTTCACAGCAGGTTTGA  100

seq1  CCCTGCTGGCCTGCAAGGATAACTGGGCAAGGGGTTCTCAGAATCTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGGCCTGCAAGGATAACTGGGCAAGGGGTTCTCAGAATCTTGGA  150

seq1  CATGCAGGCACTGCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCACTGCTAGAAGTCTCAGAGGAGCTGAGCATGGAGGAGGCCA  200

seq1  GCAGGCTAAGAACTAGCCCTGAAATCAGGGAATGGGGAATTCTGGATTAG  250
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCAGGCTAAGAACTAGCCCTGAAATCAGGGAATGGGAAATTCTGGATTAG  250

seq1  CTCAGAGGTGACTAGCCCAGGAGTATTGAGGGGCCTTCTGATGGAGACTT  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTCAGAGGTGACTAGCCCAGGAGTATTGAGGGGCCTGCTGATGGAGACTT  300

seq1  AGATGGCAAGACTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCAAGACTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCCACAGT  350

seq1  TGGTTTGATGAGAGAGACAGTCCTTGGTTGTAAACTGTTTATTGATTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGATGAGAGAGACAGTCCTTGGTTGTAAACTGTTTATTGATTGTT  400

seq1  TTTCATGGAAATGAAAGCATAACATGTCTTAAGGTTAGACTAGAAGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGAAATGAAAGCATAACATGTCTTAAGGTTAGACTAGAAGTTAA  450

seq1  GTAACTTCTGAGGAAGGAATGTCCAGGAAGGGAAGCTTATTGACTGAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTCTGAGGAAGGAATGTCCAGGAAGGGAAGCTTATTGACTGAACC  500

seq1  CTACCATCTTCTATTACCTCATTAGCAGGGAGAACCCTATTCTCTTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATCTTCTATTACCTCATTAGCAGGGAGAACCCTATTCTCTTCTAA  550

seq1  ATAACCACAGGCCATGTTCCTATATACAGATTTTGGTCCCATGAAAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCACAGGCCATGTTCCTATATACAGATTTTGGTCCCATGAAAGAGG  600

seq1  CCTGGTAGGAAGCAGGTAACACTTTTGCCATTTCTGTGGGTCTGGGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTAGGAAGCAGGTAACACTTTTGCCATTTCTGTGGGTCTGGGACAT  650

seq1  CTAACCCACTCAACTTTACCAAATTCTGGACATGGTAGTCTACTGTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCACTCAACTTTACCAAATTCTGGACATGGTAGTCTACTGTCCCA  700

seq1  GGTGTTAGTTTGAGATTTATTGATGTGAGGAGACACCAGGTCATATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTAGTTTGAGATTTATTGATGTGAGGAGACACCAGGTCATATGTTT  750

seq1  AGTATGCGGGTCTCAATGCCTACCCTCCACACTGACACACTGTTTCTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCGGGTCTCAATGCCTACCCTCCACACTGACACACTGTTTCTAAC  800

seq1  AAGGCCACAACTCCTAAACGTACCACTCACATATTCAAGCCACCACACTC  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGGCCACAACTCCTTAACGTACCACTCACATATTCAAGCCACCACACTC  850

seq1  CTCTGCAATCTCCCAAGACATTTACCTCACTCTGTCCTACTGTTTTCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAATCTCCCAAGACATTTACCTCACTCTGTCCTACTGTTTTCCTT  900

seq1  TTTCTCCTTCACAATTTATGTGTTCTATTATTTTCTTGAAA-TATCCTCC  949
      |||||||||||| |||||||||||||| ||||||||||||| ||||||||
seq2  TTTCTCCTTCAC-ATTTATGTGTTCTA-TATTTTCTTGAAATTATCCTCC  948

seq1  TATAACCCAACACTAGTGCATTACCTTCTATGGATACTGCAGTTTAAATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCCAACACTAGTGCATTACCTTCTATGGATACTGCAGTTTAAATG  998

seq1  CACATCT-CTAGACATTCAATGTTACCATCCACATAAGACACATGAT-GT  1047
      ||||||| |||||||||||||| |||||||||||||||||||||||| ||
seq2  CACATCTCCTAGACATTCAATG-TACCATCCACATAAGACACATGATGGT  1047

seq1  GGTATTTGTCTTTTTGGGTCTGGGTTATATCACTCAAAAATATTATTCAT  1097
      ||| |||||||||||||||||||||||  |||||||||   |||||||||
seq2  GGT-TTTGTCTTTTTGGGTCTGGGTTAATTCACTCAAA---ATTATTCAT  1093

seq1  GTGT-CCATCCATTAACCTGTAAATTTCATTTATATTGTCATAGTTCTTT  1146
      |||| ||||||||| ||||| |||||  |||||| ||| | ||| |||||
seq2  GTGTGCCATCCATT-ACCTG-AAATTCTATTTAT-TTG-CCTAGGTCTTT  1139

seq1  ACCATTGTGTATATGAACCATGT-ACTCATTATCCTTTCATCAGTTATAT  1195
      |||||| |||||||| ||||||| || ||||||||  ||| | ||  |||
seq2  ACCATT-TGTATATG-ACCATGTCACCCATTATCC--TCA-CGGT--TAT  1182

seq1  TTATGTCTGGGTTGTTTTGATGTCCTGACTATTG  1229
      |||||||| |  || |||||||||||||| ||||
seq2  TTATGTCTCG--TG-TTTGATGTCCTGAC-ATTG  1212