BAC Information

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BAC

Clone NameB6Ng01-074F09
Chromosome14 (Build37)
Map Location 103,462,132 - 103,462,686
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669278, Kctd12, LOC668699, Irg1
Downstream geneCln5, Fbxl3, LOC100043441, Phr1, LOC100043797, Scel, LOC100043448, Slain1, Ednrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074F09.bB6Ng01-074F09.g
ACCDH891213DH891214
length1,271722
definitionDH891213|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F09, 5' end.DH891214|Mus musculus domesticus DNA, BAC clone: B6Ng01-074F09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttgagtccaaagacctgggaatctgaaaggtcaatgatact
gagtgcttaaagggaagaaagttactgatgctagctctaggcaggaaaga
gatacttaagatggtaaagaatgaacaaattcattcctctgtcaacctac
caaaagcaatgtcaggttcaatgcaatgtccataaaacttctaatgcaac
tcttcttagaaattgaaaacctaatcttacattttaattgaaaatacacc
accaccaacacatacacacacatacaccacatcacatatcacacacacat
acatacaccatacacacacatacacacacaccacacacacatacacacac
acatacatacatacacaccatatacacatgcacacatacatacaaacaca
ccatatacacatacacaaacgcacaccacatcacatatcacacacacata
cacatacaccacacacacatatacacacatacatacatacacaccatata
cacatgcacacacatacaaacatactgtatacacacatacacactcatat
accatgcacaaacacacacatatacacacacccacaccacacacatgcat
acataccacacatacacacacaaacacacacacacacacacacacacaca
tacaggcaggatagacaaaacaatcctaaacaaaacaggaactgccaaag
ataccaccattcctgatggtgctatcctccagagatactacaataaaaac
agcacagcacagtactgatgttaaacagacagactgaccaaatggaatag
aactaagggctcagagataaggacacacaccaatagccagatgacttttg
acaggagtccaaaatatgcactggagaaaagacgggatcatcagcaagct
gcactgatttacatgcatacctatgtgtagaaatgaaacagggccttcct
cactctccctgaacaaaagcccaactccaaatggatcaagtgctccaaaa
aaggtccctgagtcttgcagaggaccacaaacgagaaaatgcttgaactc
cacaaacactagaaatctaaacaggaagacagcagcaccagaaagtggag
aaccactggagtggacaaatggtacaacatgaatacctaaagtgttcaat
gaatgggttgaatcttgaacggtcagctgttaaaaacaattaacaaaatc
taactccgcctctggcacattgtgtgtgcaatttttcttcggtgaggaaa
ataaactcttcacaatgagat
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatccgatttgggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacgatgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttattgattcttgatcttcagcacaagccattgctgttc
tattcaggaatttttcccctgtacccatatcttcaaggcttttccctact
ttctcctctataagtttcaggcgtctagcttctttctccaagactatgtc
ttcaaggcacacatttgtaaatttcattgtattaatgtttccacaaacaa
gtgtacaaacacgcagacacgtgtgaccctgttttttattgctctgtgta
catgcctaactcctaattctattgaaaacactcatcctcatatatgaggt
cctcatcagagaaacatctccttgcaacagatggcgatcattaaggaaaa
ccacaactgatcaaagtgactgtgtggagcccagtcccatctgacacatc
cacaatacaactactgcacctcagggatcaccatggaagacggggtggga
caattcctaggaatgacatggaaaccacaccctggatgtcttcttttctt
ccttccttccttccttccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103462132_103462686
seq2: B6Ng01-074F09.g_236_791 (reverse)

seq1  GGAAGGAAGGAAGGAAGGAAGGAAG-AAAGAAGACATCCAGGGTGTGGTT  49
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGGAAGGAAGGAAGAAAAGAAGACATCCAGGGTGTGGTT  50

seq1  TCCATGTCATTCCTAGGAATTGTCCCACCCCGTCTTCCATGGTGATCCCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTCATTCCTAGGAATTGTCCCACCCCGTCTTCCATGGTGATCCCT  100

seq1  GAGGTGCAGTAGTTGTATTGTGGATGTGTCAGATGGGACTGGGCTCCACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGCAGTAGTTGTATTGTGGATGTGTCAGATGGGACTGGGCTCCACA  150

seq1  CAGTCACTTTGATCAGTTGTGGTTTTCCTTAATGATCGCCATCTGTTGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACTTTGATCAGTTGTGGTTTTCCTTAATGATCGCCATCTGTTGCA  200

seq1  AGGAGATGTTTCTCTGATGAGGACCTCATATATGAGGATGAGTGTTTTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGTTTCTCTGATGAGGACCTCATATATGAGGATGAGTGTTTTCA  250

seq1  ATAGAATTAGGAGTTAGGCATGTACACAGAGCAATAAAAAACAGGGTCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATTAGGAGTTAGGCATGTACACAGAGCAATAAAAAACAGGGTCAC  300

seq1  ACGTGTCTGCGTGTTTGTACACTTGTTTGTGGAAACATTAATACAATGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCTGCGTGTTTGTACACTTGTTTGTGGAAACATTAATACAATGAA  350

seq1  ATTTACAAATGTGTGCCTTGAAGACATAGTCTTGGAGAAAGAAGCTAGAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAAATGTGTGCCTTGAAGACATAGTCTTGGAGAAAGAAGCTAGAC  400

seq1  GCCTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGATATGGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAACTTATAGAGGAGAAAGTAGGGAAAAGCCTTGAAGATATGGGT  450

seq1  ACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGAAGATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGAAGATCA  500

seq1  AGAATCAATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAAGCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAATAAATGGGACCTCATAAAATTGCAAAGCTTCTGCAAAGCAAA  550

seq1  AGACAT  555
      ||||||
seq2  AGACAT  556