BAC Information

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BAC

Clone NameB6Ng01-074I04
Chromosome14 (Build37)
Map Location 12,903,222 - 13,013,544
singlet/doubletdoublet
Overlap genePtprg
Upstream geneFhit, LOC667030, EG382843, LOC100042427, LOC667059, LOC100041996, LOC100042441
Downstream gene3830406C13Rik, EG667072, Fezf2, Cadps, EG432822, LOC100042022, LOC100042026, EG328354
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074I04.bB6Ng01-074I04.g
ACCDH891341DH891342
length1,1141,122
definitionDH891341|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I04, 5' end.DH891342|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,903,222 - 12,904,338)(13,012,388 - 13,013,544)
sequence
gaattcctcccatgtttctcctctctttcttccagaggtagtaactcctc
tctgctctaacttccacatcccttcagggccctctctcatcccgcccatt
ttcaatagttaactatgtttttacttgctagcaattctttgtattaaaat
ttccacattcaaattactggtgtggtttctgtctcctgatgggaccccgg
ctggaagaaaaagggtaagagaaagccactcacaagaaggaattaattgc
catagaattaccaactcatgactggtgccctatttttctcaacatgctca
atcactgattttactttagtctggattacatcagacattctgtaatcagg
tgccaaatattttcaccagcatgactgcatcgagtgcaaaataagtaaat
atccttttatgactcagtaatacgaagccatttgtctgctcagcagagag
ttattcaacagcgtctgcaaactggcaatagagaaggtgcttaaaaaaaa
atcaagactcaggccttgctttgccttgcaagtttcttaaggagctagga
cctgtgtgtatggacagctacccaaggaggcagctgagtctgcatgcagc
ctgcattacatttgcatggcctcgtatttctagactaagtgatgtcgcag
gcggtactctgtcctgtaggatccacttgcatttctaagtgcctgggcat
ttacttgtctttttggttgtttcccattttctctacattcataaaacttg
cttctgagaaattcaagagctataaattttggtgatcaatgaaaagatat
agtttataggcttctagaatagtgtctgaatattgtatgctctgaggctt
gaggacacaccccttggactctggggattactagaagccagctgatcaga
gtgagggctttggagtatggtatagtgtggagatcggaagattcaaaggg
gaaatgggtcttgtgtggacaattttgtgtagctatgttgacagtggtct
ctatctcttaatacacacaaacttctatatataaaaaattaagcagccac
ccacctagaatttgttctggccaagcctgctcgggtctctaatgcttcag
aagtaaatcactct
gaattccatatatactgtctaatttaatctttatagaatgggtattctat
aaagaagacttctcaaaagacccatttcctagatgaggaaattgagtctc
aaatggatcccatgccaaagagccaggaagtggtagagctaatgtgacaa
tccacatgttcctgagtcaaggtttgtagccacactataaaatatgcatt
tgatactgcgtaactcacacttagagtcgacaaatacctgcagttcctta
ggatgatctcaacttaggtagacctgatatgtttccctcagtcctaagca
aagaagttctcagattccttgtaagcaactgcagacacgaggcatctcct
gggtgacgcacactgggcctgtggcaagtccacgccatactaagagctaa
gcacatacacaggctgaatagtgtctgagtgtctgaccatggacggcatt
taccttagtgttggacatgagtcatgctggtcctttaaagtactgcagaa
agaaatgtcgtcatggactgggcataagaactgttcacaggatggtcaca
gacccctctcagagaagagctttaggtttaaaacaataaagagaggtttc
tagtcccatatttgaaaagctgttttgaaagtatactaggaatcgaaaac
ttcaacaggtttaaaaaaaaaaaaaaaaaagatcctagaaaggaaaaaat
gacatcaccagtcagtgagccatgcacacggccagaactgtacagcgtaa
gaatgggccagccatgaccttcctcattaccctgtcaagatcactcctca
tgaatcaaaactgtttcctggggatataagtgaaatttcatctcaataat
cagataacagagacaagccattccatggaaaaggtagatataaattgtat
aagttggtttactgaaagtaaaaggaactacttacacattaattactacc
tactatgatttagtataaagatgatgattttaacagttacatgtgagata
gtctatataaatatctcagagtcagtgcagtattagactatatgccaacg
tctattgttctataaactccttcagtgactttcagaatattaagaatcat
gcacatgttacacgattttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12903222_12904338
seq2: B6Ng01-074I04.b_41_1154

seq1  GAATTCCTCCCATGTTTCTCCTCTCTTTCTTCCAGAGGTAGTAACTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCATGTTTCTCCTCTCTTTCTTCCAGAGGTAGTAACTCCTC  50

seq1  TCTGCTCTAACTTCCACATCCCTTCAGGGCCCTCTCTCATCCCGCCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTAACTTCCACATCCCTTCAGGGCCCTCTCTCATCCCGCCCATT  100

seq1  TTCAATAGTTAACTATGTTTTTACTTGCTAGCAATTCTTTGTATTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAGTTAACTATGTTTTTACTTGCTAGCAATTCTTTGTATTAAAAT  150

seq1  TTCCACATTCAAATTACTGGTGTGGTTTCTGTCTCCTGATGGGACCCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACATTCAAATTACTGGTGTGGTTTCTGTCTCCTGATGGGACCCCGG  200

seq1  CTGGAAGAAAAAGGGTAAGAGAAAGCCACTCACAAGAAGGAATTAATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAAAAAGGGTAAGAGAAAGCCACTCACAAGAAGGAATTAATTGC  250

seq1  CATAGAATTACCAACTCATGACTGGTGCCCTATTTTTCTCAACATGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATTACCAACTCATGACTGGTGCCCTATTTTTCTCAACATGCTCA  300

seq1  ATCACTGATTTTACTTTAGTCTGGATTACATCAGACATTCTGTAATCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGATTTTACTTTAGTCTGGATTACATCAGACATTCTGTAATCAGG  350

seq1  TGCCAAATATTTTCACCAGCATGACTGCATCGAGTGCAAAATAAGTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAATATTTTCACCAGCATGACTGCATCGAGTGCAAAATAAGTAAAT  400

seq1  ATCCTTTTATGACTCAGTAATACGAAGCCATTTGTCTGCTCAGCAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTATGACTCAGTAATACGAAGCCATTTGTCTGCTCAGCAGAGAG  450

seq1  TTATTCAACAGCGTCTGCAAACTGGCAATAGAGAAGGTGCTTAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAACAGCGTCTGCAAACTGGCAATAGAGAAGGTGCTTAAAAAAAA  500

seq1  ATCAAGACTCAGGCCTTGCTTTGCCTTGCAAGTTTCTTAAGGAGCTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGACTCAGGCCTTGCTTTGCCTTGCAAGTTTCTTAAGGAGCTAGGA  550

seq1  CCTGTGTGTATGGACAGCTACCCAAGGAGGCAGCTGAGTCTGCATGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGTATGGACAGCTACCCAAGGAGGCAGCTGAGTCTGCATGCAGC  600

seq1  CTGCATTACATTTGCATGGCCTCGTATTTCTAGACTAAGTGATGTCGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTACATTTGCATGGCCTCGTATTTCTAGACTAAGTGATGTCGCAG  650

seq1  GCGGTACTCTGTCCTGTAGGATCCACTTGCATTTCTAAGTGCCTGGGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTACTCTGTCCTGTAGGATCCACTTGCATTTCTAAGTGCCTGGGCAT  700

seq1  TTACTTGTCTTTTTGGTTGTTTCCCATTTTCTCTACATTCATAAAACTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTCTTTTTGGTTGTTTCCCATTTTCTCTACATTCATAAAACTTG  750

seq1  CTTCTGAGAAATTCAAGAGCTATAAATTTTGGTGATCAATGAAAAGATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGAAATTCAAGAGCTATAAATTTTGGTGATCAATGAAAAGATAT  800

seq1  AGTTTATAGGCTTCTAGAATAGTGTCTGAATATTGTATGCTCTGAGGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATAGGCTTCTAGAATAGTGTCTGAATATTGTATGCTCTGAGGCTT  850

seq1  GAGGCCACACCCCTTGGACTCTGGGGATTACTAGAAGCCAGCTGATCAGA  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACACCCCTTGGACTCTGGGGATTACTAGAAGCCAGCTGATCAGA  900

seq1  GTGAGGGCTTTGGAGTATGGTATAGTGTGGAGATCGGAAGATTCAAAGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGCTTTGGAGTATGGTATAGTGTGGAGATCGGAAGATTCAAAGGG  950

seq1  GAAATGGTTCTTGTGTGGACAAATTTTGTGTAGCTATGTTGACAGTGTCT  1000
      ||||||| |||||||||||| ||||||||||||||||||||||||||   
seq2  GAAATGGGTCTTGTGTGGAC-AATTTTGTGTAGCTATGTTGACAGTGGTC  999

seq1  TCTATCTCTTAATACACACAAAC-TCTATATAATAATATTTAGGCAGCCA  1049
      ||||||||||||||||||||||| ||||||||  || | ||| |||||||
seq2  TCTATCTCTTAATACACACAAACTTCTATATATAAAAAATTAAGCAGCCA  1049

seq1  CCACCCTAGAA-TTGTTCTGGCCAGTCTCTGCCGCGGTTCTC-CATGCTG  1097
      ||  ||||||| ||||||||||||  | ||| | ||| ||||  ||||| 
seq2  CCCACCTAGAATTTGTTCTGGCCAAGC-CTG-CTCGGGTCTCTAATGCT-  1096

seq1  TCAAGAAGTTAAATCACTCT  1117
      || ||||| |||||||||||
seq2  TC-AGAAG-TAAATCACTCT  1114

seq1: chr14_13012388_13013544
seq2: B6Ng01-074I04.g_70_1191 (reverse)

seq1  AAAAAAATATGTGGTTATAACATGTGCATGAATTCTTAATATTCTGAAAA  50
      ||||||||  |||    ||||||||||||| |||||||||||||||  ||
seq2  AAAAAAAT-CGTG----TAACATGTGCATG-ATTCTTAATATTCTG--AA  42

seq1  AGTCTAACCTGAAGAGTTTTATATGAAACAATTAGAAGTTGTGCATATAG  100
      ||||    ||||||   ||||||   ||||| |||| |||| ||||||||
seq2  AGTC---ACTGAAGGAGTTTATA--GAACAA-TAGACGTTG-GCATATAG  85

seq1  TCCTAATTACTGCACTTGAACCTCTTGAGAATATTTATATAAGACTTATC  150
      | |||| |||||||| |||  ||| |||| |||||||||| |||| ||||
seq2  T-CTAA-TACTGCAC-TGA--CTC-TGAG-ATATTTATAT-AGAC-TATC  126

seq1  TCACATGTAAACTGTTTAAAATTCATAATCTTTTAATACTAAATCATTAA  200
      |||||||| |||||||  ||| |||| ||||||  ||||||||||||  |
seq2  TCACATGT-AACTGTT--AAAATCATCATCTTT--ATACTAAATCAT--A  169

seq1  GTAGGGTAGTTAATTAATGTTGTAAGTAGTTCCTTTTTACTTTCAGTAAA  250
      ||| ||||| ||||||||| ||||||||||||| ||||||||||||||||
seq2  GTA-GGTAG-TAATTAATG-TGTAAGTAGTTCC-TTTTACTTTCAGTAAA  215

seq1  CCAACTTATACAATTTATATCTAACCTTTTCCATGGAATGGCTTGTCTCT  300
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCAACTTATACAATTTATATCT-ACCTTTTCCATGGAATGGCTTGTCTCT  264

seq1  GTTATCTGATTATTGAGATGAAATTTCACTTATATCCCCAGGAAACAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTGATTATTGAGATGAAATTTCACTTATATCCCCAGGAAACAGTT  314

seq1  TTGATTCATGAGGAGTGATCTTGACAGGGTAATGAGGAAGGTCATGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCATGAGGAGTGATCTTGACAGGGTAATGAGGAAGGTCATGGCTG  364

seq1  GCCCATTCTTACGCTGTACAGTTCTGGCCGTGTGCATGGCTCACTGACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTCTTACGCTGTACAGTTCTGGCCGTGTGCATGGCTCACTGACTG  414

seq1  GTGATGTCATTTTTTCCTTTCTAGGATC-TTTTTTTTTTTTTTTTTAAAC  499
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTGATGTCATTTTTTCCTTTCTAGGATCTTTTTTTTTTTTTTTTTTAAAC  464

seq1  CTGTTGAAGTTTTCGATTCCTAGTATACTTTCAAAACAGCTTTTCAAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAAGTTTTCGATTCCTAGTATACTTTCAAAACAGCTTTTCAAATA  514

seq1  TGGGACTAGAAACCTCTCTTTATTGTTTTAAACCTAAAGCTCTTCTCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTAGAAACCTCTCTTTATTGTTTTAAACCTAAAGCTCTTCTCTGA  564

seq1  GAGGGGTCTGTGACCATCCTGTGAACAGTTCTTATGCCCAGTCCATGACG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTCTGTGACCATCCTGTGAACAGTTCTTATGCCCAGTCCATGACG  614

seq1  ACATTTCTTTCTGCAGTACTTTAAAGGACCAGCATGACTCATGTCCAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTTTCTGCAGTACTTTAAAGGACCAGCATGACTCATGTCCAACA  664

seq1  CTAAGGTAAATGCCGTCCATGGTCAGACACTCAGACACTATTCAGCCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTAAATGCCGTCCATGGTCAGACACTCAGACACTATTCAGCCTGT  714

seq1  GTATGTGCTTAGCTCTTAGTATGGCGTGGACTTGCCACAGGCCCAGTGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGCTTAGCTCTTAGTATGGCGTGGACTTGCCACAGGCCCAGTGTG  764

seq1  CGTCACCCAGGAGATGCCTCGTGTCTGCAGTTGCTTACAAGGAATCTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACCCAGGAGATGCCTCGTGTCTGCAGTTGCTTACAAGGAATCTGAG  814

seq1  AACTTCTTTGCTTAGGACTGAGGGAAACATATCAGGTCTACCTAAGTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTTGCTTAGGACTGAGGGAAACATATCAGGTCTACCTAAGTTGA  864

seq1  GATCATCCTAAGGAACTGCAGGTATTTGTCGACTCTAAGTGTGAGTTACG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCCTAAGGAACTGCAGGTATTTGTCGACTCTAAGTGTGAGTTACG  914

seq1  CAGTATCAAATGCATATTTTATAGTGTGGCTACAAACCTTGACTCAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCAAATGCATATTTTATAGTGTGGCTACAAACCTTGACTCAGGAA  964

seq1  CATGTGGATTGTCACATTAGCTCTACCACTTCCTGGCTCTTTGGCATGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGATTGTCACATTAGCTCTACCACTTCCTGGCTCTTTGGCATGGG  1014

seq1  ATCCATTTGAGACTCAATTTCCTCATCTAGGAAATGGGTCTTTTGAGAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTGAGACTCAATTTCCTCATCTAGGAAATGGGTCTTTTGAGAAG  1064

seq1  TCTTCTTTATAGAATACCCATTCTATAAAGATTAAATTAGACAGTATATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTATAGAATACCCATTCTATAAAGATTAAATTAGACAGTATATA  1114

seq1  TGGAATTC  1157
      ||||||||
seq2  TGGAATTC  1122