BAC Information

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BAC

Clone NameB6Ng01-074O13
Chromosome14 (Build37)
Map Location 118,148,435 - 118,149,548
singlet/doubletsinglet
Overlap geneGpc6
Upstream genenone
Downstream gene5730405N03Rik, LOC100043822, Dct, Tgds, Gpr180, LOC100043824, LOC100043539, Sox21, LOC100043825, EG668814, LOC435422, Abcc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074O13.bB6Ng01-074O13.g
ACCDH891626DH891627
length1,1161,155
definitionDH891626|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O13, 5' end.DH891627|Mus musculus domesticus DNA, BAC clone: B6Ng01-074O13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattaatttctttatgtccaggttgccattgaaaagagaaacaat
ggtgttagtcacctcctcgctactctgtctttccacttgctaagagtgcc
ctgaacttctgtgctgagcagtgaaggaggttggttctccaggctccatg
gatgcaactgattggtgagagccggccagcacgttggccactgagcatgg
catagagataaatctgaggcaaagagaacagtatgaaaacaaacaaacaa
acaaacaaacaaacaaacaacccatttgccaaggggccctggtaacgcag
ctgatgcacgtcaaggagcaattcaacaggactcattttcttacagagca
taagggagtcagcctcagctactgcgagcagccagttataaatgtacaag
tatagtagtgaccaatccaggagagagagagagagagagacagagagaga
gagacagagagacagagacagagagacagagagagagagacagagagaca
gagagagacagagagagagacagagagacagagagagagagagacagaga
gacagagagagacagagagagagacagagagacagatacagacagagaca
gacagagactgacagagagacatacagagacagagagacagagaagagat
ggagtaggactgtttccagctgacattgctgagccactgaatccaacttt
atttcctctcctgacttctcagttggaaaacacaatacatttccaacatg
accaaaggaagtctgagcagggttttctgaacagagcatcctagtgctgt
agctgagatgcccatcctgaccacaactttggcagctgttttatgatggg
tagccaacatctgtttgtgtcttgctgtctgctttctgcttccatcatag
tccgtctccagatggctgagttcaatgatgaatccattgagctttgataa
acacgtgctcaggaaagtggatggcaagcctcgttgaaaatggatgtcac
atgacaataaaccatgtaaatggcacccatactttacacccttctactgt
gttacaacagaggaggaaagttagtgttcaattaacataaataatatccc
cttctatcctctatta
gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatctagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
cttcattgcagccttatttataatagtcagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatagacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
caggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagactaagttttgagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcctgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatgatcacagggctcccaa
tggaggagctagagaaagacccacgagctaaagggatctgcaccctatag
ttgacacatatgactaccagtacccggagctcttgactctagctgcatat
gtaatcaaaagatgtctagtcgcatcactgaagagaggctcattggaccg
caacttaatgtccagtaagggacgccaaggccaaatggggaaaggtgggt
gtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_118148435_118149548
seq2: B6Ng01-074O13.b_48_1163 (reverse)

seq1  TAATAGA-GATAG-AGTGGATATTATTTATGTTAATTG-ACACTAACTTT  47
      ||||||| ||||| || ||||||||||||||||||||| |||||||||||
seq2  TAATAGAGGATAGAAGGGGATATTATTTATGTTAATTGAACACTAACTTT  50

seq1  CCCTCCTCTGTTGT-ACACAGTAGAAGGTTGTAAAGTATGGTGGCCATTT  96
       ||||||||||||| ||||||||||||| ||||||||||||  |||||||
seq2  -CCTCCTCTGTTGTAACACAGTAGAAGGGTGTAAAGTATGGGTGCCATTT  99

seq1  ACATGGTTTATTGTCATGTTGACATCCATTTTTCACGAGGCTTGCCATCC  146
      |||||||||||||||||| |||||||||||||  ||||||||||||||||
seq2  ACATGGTTTATTGTCATG-TGACATCCATTTTCAACGAGGCTTGCCATCC  148

seq1  ACTTTCCTGAGCACCTGTTTATCAGAGCTCAATGGATTCATCATTGAACT  196
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  ACTTTCCTGAGCACGTGTTTATCAAAGCTCAATGGATTCATCATTGAACT  198

seq1  CAGCCATCTGGAGACGGACTATGATGGAAGCAGAAAGCAGACAGCAAGAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATCTGGAGACGGACTATGATGGAAGCAGAAAGCAGACAGCAAGAC  248

seq1  ACAAACAGATGTTGGCTACCCATCATAAAACAGCTGCCAAAGTTGTGGTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAGATGTTGGCTACCCATCATAAAACAGCTGCCAAAGTTGTGGTC  298

seq1  AGGATGGGCATCTCAGCTACAGCACTAGGATGCTCTGTTCAGAAAACCCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGGCATCTCAGCTACAGCACTAGGATGCTCTGTTCAGAAAACCCT  348

seq1  GCTCAGACTTCCTTTGGTCATGTTGGAAATGTATTGTGTTTTCCAACTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGACTTCCTTTGGTCATGTTGGAAATGTATTGTGTTTTCCAACTGA  398

seq1  GAAGTCAGGAGAGGAAATAAAGTTGGATTCAGTGGCTCAGCAATGTCAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGGAGAGGAAATAAAGTTGGATTCAGTGGCTCAGCAATGTCAGC  448

seq1  TGGAAACAGTCCTACTCCATCTCTTCTCTGTCTCTCTGTCTCTGTATGTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAGTCCTACTCCATCTCTTCTCTGTCTCTCTGTCTCTGTATGTC  498

seq1  TCTCTGTCAGTCTCTGTCTGTCTCTGTCTGTATCTGTCTCTCTGTCTCTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCAGTCTCTGTCTGTCTCTGTCTGTATCTGTCTCTCTGTCTCTC  548

seq1  TCTCTGTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTGTCTCTCTGTC  598

seq1  TCTCTCTCTGTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCTCTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCTCTG  648

seq1  TCTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCCT  698

seq1  GGATTGGTCACTACTATACTTGTACATTTATAACTGGCTGCTCGCAGTAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGTCACTACTATACTTGTACATTTATAACTGGCTGCTCGCAGTAG  748

seq1  CTGAGGCTGACTCCCTTATGCTCTGTAAGAAAATGAGTCCTGTTGAATTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTGACTCCCTTATGCTCTGTAAGAAAATGAGTCCTGTTGAATTG  798

seq1  CTCCTTGACGTGCATCAGCTGCGTTACCAGGGCCCCTTGGCAAATGGGTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGACGTGCATCAGCTGCGTTACCAGGGCCCCTTGGCAAATGGGTT  848

seq1  GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTCATACTGTTCTCTTTGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTCATACTGTTCTCTTTGC  898

seq1  CTCAGATTTATCTCTATGCCATGCTCAGTGGCCAACGTGCTGGCCGGCTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATTTATCTCTATGCCATGCTCAGTGGCCAACGTGCTGGCCGGCTC  948

seq1  TCACCAATCAGTTGCATCCATGGAGCCTGGAGAACCAACCTCCTTCACTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAATCAGTTGCATCCATGGAGCCTGGAGAACCAACCTCCTTCACTG  998

seq1  CTCAGCACAGAAGTTCAGGGCACTCTTAGCAAGTGGAAAGACAGAGTAGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCACAGAAGTTCAGGGCACTCTTAGCAAGTGGAAAGACAGAGTAGC  1048

seq1  GAGGAGGTGACTAACACCATTGTTTCTCTTTTCAATGGCAACCTGGACAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGTGACTAACACCATTGTTTCTCTTTTCAATGGCAACCTGGACAT  1098

seq1  AAAGAAATTAATGAATTC  1114
      ||||||||||||||||||
seq2  AAAGAAATTAATGAATTC  1116