BAC Information

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BAC

Clone NameB6Ng01-075L21
Chromosome14 (Build37)
Map Location 121,469,847 - 121,587,796
singlet/doubletdoublet
Overlap geneFarp1, LOC100043837
Upstream geneLOC100043831, Mbnl2, Rap2a, LOC668835, LOC668837, Ranbp5
Downstream geneStk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075L21.bB6Ng01-075L21.g
ACCDH892216DH892217
length1,116952
definitionDH892216|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L21, 5' end.DH892217|Mus musculus domesticus DNA, BAC clone: B6Ng01-075L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,586,678 - 121,587,796)(121,469,847 - 121,470,811)
sequence
gaattctggaagggacttttcctgtagtgactaagcaaaattcgctacaa
acagtatgcaaaattttagttattcttgtagaaaatagacggattaatta
gatatatgttttttgtttggagacctatttttgtaatttcctttaaaagt
ataataataataattaatgttaatgtgttggtaaggttttcaacactgta
ataaataccaagagaaacaatttaaaagaagggaagattcatttgagctc
acagtttcagtccaaggttggcggaagccattgttcgggggcaggattac
caatgcattgggtatatgtggtagaagacgttgcataactcatgacagcc
atgaagcagagacataggaagagatcagggcaagatacactcattgttaa
aatatttctttcatttataatgtctatatgtgtgtctatgtgtggatatg
gacgcaagagcccagggacccatggaggccagaagagggcatggaccccc
agagctggagttacaggcaggtttgagccactggacatgagggctaggaa
cagatttgaggtcccagctactaagccatcccagatacacctctcctctt
gaaaaaaaaaaatatttgatttcatgggtacgagtgttggcttgaatgaa
tgtatgtgcactgtgtgtgtgcctggtgccttcagaggtcagaagagatc
atcagtttccctgaacaggagttaaaggcagttgtgaaaccccatgtggg
tgctgggaactaaactctggtcctcagcaggaacagtacgtactctggac
tgggaagcaatccccccagaagacagcatttctcatcctcctccttagcc
cccagcccctacgctctgtctggctcccctttctaagatgttcctgagcc
ttggggaagatggggggagctttgatttaagggtttggtgtgtactagtt
actattcttaacattcccaccagctagagtcttcttgcattaactgctgc
tcactgcaaaagaagaatcctctggtgagcttaaagcagcatcaaggttt
atggagtgaaggcttgcatagctgcacttctctgaaaggtgatgttcacc
ctctgacctcgtgggg
gaattcccttttggcatcgggtcgttctggaagaggaagcagagacccgg
ctagcattttttatgtctgccacatgagtagctttttccattggatgtgc
ccatttaattctttctttctttcttctgaaagtttaaagctttgtagcct
gtctggagaccatgccacttgcttgagactccttgcactgggatacctgt
ggatgtaagcctggctttttatggaaagtctttaatgtttttgaatagtt
ttacatctcttttttgaaggtttttgcataggttttgaaaatttgcatat
tttttggaataatttacatatgtttagaatattttgcatatgcttagatt
attttgcatatgtttacatgctgtttactgtacattgcaactccaactca
gagacttggagttgcaatgtcctgttcccttagtcttagtccagctctgt
gattgtttgtggatccatttccttttatttaactgagtgatgtacccccc
ccccccacttccttctcctgggtctgcgtttataggtgcttattctattt
tctcttggtacagttttgtggctttctttctgctgttctttctggcccat
ttctttagttctgtcagtcattttaaatgtctacgactagttcttatcca
ttctttgtaactccatatctggtctgggaggccagaccactcgcttgggg
ggattgtttttttataaagaatctgctcctgctccattaatgaatgcttg
gtcatgcttggtcatcagtttgaattcttaccaatcccccaccccatgga
tgcttaattttcctcccctccacacctccttaccaccttgtcttaccatc
ttcctctgccagcattcccacccagtgatacacgcaccttgatgcagctg
agcttagggtaggttaggttagttagggctaggcatagggttagggggta
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121586678_121587796
seq2: B6Ng01-075L21.b_51_1166 (reverse)

seq1  CCCCACGAGAGCCAGAAGGGTTGAACACTTCACCTTTCAGAGAAGTGCAG  50
      ||||||||| | ||||  || ||||||  |||||||||||||||||||||
seq2  CCCCACGAG-GTCAGA--GGGTGAACA--TCACCTTTCAGAGAAGTGCAG  45

seq1  CTGTGCCAGCCCTTCACTCCATAAACCTGTGCTGCT--TTTAAGCTCCAC  98
      || ||| || |||||||||||||||||| || ||||  |||||||| |||
seq2  CTATGCAAG-CCTTCACTCCATAAACCT-TGATGCTGCTTTAAGCT-CAC  92

seq1  CAGAGGA-TCTTCTTTTGCAGTGAGCAGCAGTTAATGCA--GAGACTCCT  145
      ||||||| |||||||||||||||||||||||||||||||   ||||| ||
seq2  CAGAGGATTCTTCTTTTGCAGTGAGCAGCAGTTAATGCAAGAAGACT-CT  141

seq1  AGCTGGTTGGAATGTTAAGAATAAGTAACTAGTACACACCAAACCC-TAA  194
      ||||||| |||||||||||||| ||||||||||||||||||||||| |||
seq2  AGCTGGTGGGAATGTTAAGAAT-AGTAACTAGTACACACCAAACCCTTAA  190

seq1  ATCAAAGCTCCCCCCATCTTCCCCAAGGCTCAGGAACATCTTAG-AAGGG  243
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATCAAAGCTCCCCCCATCTTCCCCAAGGCTCAGGAACATCTTAGAAAGGG  240

seq1  GAGCCAGACAGAGCGTAGGGGCTGGGGGCTAAGGAGGAGGATGAGAAATG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGACAGAGCGTAGGGGCTGGGGGCTAAGGAGGAGGATGAGAAATG  290

seq1  CTGTCTTCTGGGGGGATTGCTTCCCAGTCCAGAGTACGTACTGTTCCTGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCTGGGGGGATTGCTTCCCAGTCCAGAGTACGTACTGTTCCTGC  340

seq1  TGAGGACCAGAGTTTAGTTCCCAGCACCCACATGGGGTTTCACAACTGCC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACCAGAGTTTAGTTCCCAGCACCCACATGGGGTTTCACAACTGCC  390

seq1  TTTAACTCCTGTTCAGGGAAACTGATGATCTCTTCTGACCTCTGAAGGCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTCCTGTTCAGGGAAACTGATGATCTCTTCTGACCTCTGAAGGCA  440

seq1  CCAGGCACACACACAGTGCACATACATTCATTCAAGCCAACACTCGTACC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCACACACACAGTGCACATACATTCATTCAAGCCAACACTCGTACC  490

seq1  CATGAAATCAAATATTTTTTTTTTTCAAGAGGAGAGGTGTATCTGGGATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATCAAATATTTTTTTTTTTCAAGAGGAGAGGTGTATCTGGGATG  540

seq1  GCTTAGTAGCTGGGACCTCAAATCTGTTCCTAGCCCTCATGTCCAGTGGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTAGCTGGGACCTCAAATCTGTTCCTAGCCCTCATGTCCAGTGGC  590

seq1  TCAAACCTGCCTGTAACTCCAGCTCTGGGGGTCCATGCCCTCTTCTGGCC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCTGCCTGTAACTCCAGCTCTGGGGGTCCATGCCCTCTTCTGGCC  640

seq1  TCCATGGGTCCCTGGGCTCTTGCGTCCATATCCACACATAGACACACATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGTCCCTGGGCTCTTGCGTCCATATCCACACATAGACACACATA  690

seq1  TAGACATTATAAATGAAAGAAATATTTTAACAATGAGTGTATCTTGCCCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATTATAAATGAAAGAAATATTTTAACAATGAGTGTATCTTGCCCT  740

seq1  GATCTCTTCCTATGTCTCTGCTTCATGGCTGTCATGAGTTATGCAACGTC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTTCCTATGTCTCTGCTTCATGGCTGTCATGAGTTATGCAACGTC  790

seq1  TTCTACCACATATACCCAATGCATTGGTAATCCTGCCCCCGAACAATGGC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCACATATACCCAATGCATTGGTAATCCTGCCCCCGAACAATGGC  840

seq1  TTCCGCCAACCTTGGACTGAAACTGTGAGCTCAAATGAATCTTCCCTTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGCCAACCTTGGACTGAAACTGTGAGCTCAAATGAATCTTCCCTTCT  890

seq1  TTTAAATTGTTTCTCTTGGTATTTATTACAGTGTTGAAAACCTTACCAAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTGTTTCTCTTGGTATTTATTACAGTGTTGAAAACCTTACCAAC  940

seq1  ACATTAACATTAATTATTATTATTATACTTTTAAAGGAAATTACAAAAAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAACATTAATTATTATTATTATACTTTTAAAGGAAATTACAAAAAT  990

seq1  AGGTCTCCAAACAAAAAACATATATCTAATTAATCCGTCTATTTTCTACA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCCAAACAAAAAACATATATCTAATTAATCCGTCTATTTTCTACA  1040

seq1  AGAATAACTAAAATTTTGCATACTGTTTGTAGCGAATTTTGCTTAGTCAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAACTAAAATTTTGCATACTGTTTGTAGCGAATTTTGCTTAGTCAC  1090

seq1  TACAGGAAAAGTCCCTTCCAGAATTC  1119
      ||||||||||||||||||||||||||
seq2  TACAGGAAAAGTCCCTTCCAGAATTC  1116

seq1: chr14_121469847_121470811
seq2: B6Ng01-075L21.g_69_1020

seq1  GAATTCCCTTTTGGCATCGGGTCGTTCTGGAAGAGGAAGCAGAGACCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTTTGGCATCGGGTCGTTCTGGAAGAGGAAGCAGAGACCCGG  50

seq1  CTAGCATTTTTTATGTCTGCCACATGAGTAGCTTTTTCCATTGGATGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATTTTTTATGTCTGCCACATGAGTAGCTTTTTCCATTGGATGTGC  100

seq1  CCATTTAATTCTTTCTTTCTTTCTTCTGAAAGTTTAAAGCTTTGTAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAATTCTTTCTTTCTTTCTTCTGAAAGTTTAAAGCTTTGTAGCCT  150

seq1  GTCTGGAGACCATGCCACTTGCTTGAGACTCCTTGCACTGGGATACCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAGACCATGCCACTTGCTTGAGACTCCTTGCACTGGGATACCTGT  200

seq1  GGATGTAAGCCTGGCTTTTTATGGAAAGTCTTTAATGTTTTTGAATAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAAGCCTGGCTTTTTATGGAAAGTCTTTAATGTTTTTGAATAGTT  250

seq1  TTACATCTCTTTTTTGAAGGTTTTTGCATAGGTTTTGAAAATTTGCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTCTTTTTTGAAGGTTTTTGCATAGGTTTTGAAAATTTGCATAT  300

seq1  TTTTTGGAATAATTTACATATGTTTAGAATATTTTGCATATGCTTAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAATAATTTACATATGTTTAGAATATTTTGCATATGCTTAGATT  350

seq1  ATTTTGCATATGTTTACATGCTGTTTACTGTACATTGCAACTCCAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCATATGTTTACATGCTGTTTACTGTACATTGCAACTCCAACTCA  400

seq1  GAGACTTGGAGTTGCAATGTCCTGTTCCCTTAGTCTTAGTCCAGCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGGAGTTGCAATGTCCTGTTCCCTTAGTCTTAGTCCAGCTCTGT  450

seq1  GATTGTTTGTGGATCCATTTCCTTTTATTTAACTGAGTGATGTACCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTGTGGATCCATTTCCTTTTATTTAACTGAGTGATGTACCCCCC  500

seq1  CCCCCCACTTCCTTCTCCTGGGTCTGCGTTTATAGGTGCTTATTCTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACTTCCTTCTCCTGGGTCTGCGTTTATAGGTGCTTATTCTATTT  550

seq1  TCTCTTGGTACAGTTTTGTGGCTTTCTTTCTGCTGTTCTTTCTGGCCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGTACAGTTTTGTGGCTTTCTTTCTGCTGTTCTTTCTGGCCCAT  600

seq1  TTCTTTAGTTCTGTCAGTCATTTTAAATGTCTACGACTAGTTCTTATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGTTCTGTCAGTCATTTTAAATGTCTACGACTAGTTCTTATCCA  650

seq1  TTCTTTGTAACTCCATATCTGGTCTGGGAGGCCAGACCACTCGCTTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTAACTCCATATCTGGTCTGGGAGGCCAGACCACTCGCTTGGGG  700

seq1  GGATTGTTTTTTTATAAAGAATCTGCTCCTGCTCCATTAATGAATGCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGTTTTTTTATAAAGAATCTGCTCCTGCTCCATTAATGAATGCTTG  750

seq1  GTCATGCTTGGTCATCAGTTTGAATTCTTACCAATCCCCCACCCCATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCTTGGTCATCAGTTTGAATTCTTACCAATCCCCCACCCCATGGA  800

seq1  TGCTTAATTTTCCTCCCCTCCACACCTCCTTACCACCTTGTCTTACCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAATTTTCCTCCCCTCCACACCTCCTTACCACCTTGTCTTACCATC  850

seq1  TTCCTCTGCCAGCATTCCCACCCAGTGATAACACGCACCTTTGAATGCAG  900
      ||||||||||||||||||||||||||||| |||||||||||   ||||||
seq2  TTCCTCTGCCAGCATTCCCACCCAGTGAT-ACACGCACCTT--GATGCAG  897

seq1  CTGAGGCTTAGGGTTAGGGTTAAGGGTTAGGTTTAGGGCTAGGCATTAGG  950
      |||| |||||||||   |||||  ||||||  ||||||||||||||    
seq2  CTGA-GCTTAGGGT--AGGTTA--GGTTAG--TTAGGGCTAGGCAT---A  937

seq1  GGGTTAGGGGGTAGG  965
      |||||||||||||||
seq2  GGGTTAGGGGGTAGG  952