BAC Information

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BAC

Clone NameB6Ng01-076A13
Chromosome14 (Build37)
Map Location 89,212,663 - 89,213,806
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076A13.bB6Ng01-076A13.g
ACCDH892421DH892422
length1,133597
definitionDH892421|Mus musculus domesticus DNA, BAC clone: B6Ng01-076A13, 5' end.DH892422|Mus musculus domesticus DNA, BAC clone: B6Ng01-076A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatttagctttgtactctactttttaatagggttatttggtt
ctctggagcctaagttcttgaggtctttgtatattttggatattagccct
ttgtcagatatagggctgataaagatctttccccaattgtgaactgccac
tttgtcctattgattgtgtcctttgccttacagctttcaaattttatgag
gtcccatttgaatctttttgagaatttaatataattaccctttcaacttc
actttcctctctctaaacagtcccacatacaattttcctttctttcaagt
aattgacagtttttaattacaaacacacactaaaatttaaattttttgct
ataatcaaaaacaaaataataaacttcttttattctgaggttgacatttt
ccatttcaatttgatacaatagacaatctttgccactggactgggtagat
tttacttactgcattgttttatgttttgcttctttttcctccctcaggta
atcatgatttatatatttttaaaaacaactgaaaaatgaattcccttaga
cctagacatatcccaagttacttcattactacatagtgctttagttattt
tcccaactttgtcatctgatttagtttcccaacttaaatcatatcaatat
ttacataattgaagtaatcagtagtcttgtctctgaatacactgacttcc
tctttcctaaatattttctgtctgtctgtcaattctgccttgagtaaggt
gcccttaaatgaggttataagttttgaacctgggttttttttcctgaaat
ttgcaggaaaatttcaaaatatttatataaaggtagataagcaatgggta
gaatgtagaaaagccaagaaaatatgttttatcaattgagttttatgcag
tagatagcaagatacaccttgattcaacacatccatgacataaggcaact
taaattgctttcagagttttcacaaatgtgggacagacagctgcaagctt
atctaacaatgtcatgatacatttgttgagaagctctgcggtattaactt
tggcattttatagtttacctacttacatgcaggggtgcactgtgaagaag
tttctggtttgagaagtgtcagtatgttagaaa

gaattctcatctgagcaataccgaatggctgagaagcacctgaaaaaatg
tccaacatccttaatcatcagcaaaacgcaaatcaaaacaaccctgaggt
tccatctcacaccagtcagaatggctaagttcaaaaattcaggtgacagc
agatgctggcaaggatgtggtgaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctgaaagtcagtctggtggtttctca
gaaaattggacataacactactggaggatcctatcatacctctcctgggc
atatatccagaagatgtttcaacccgtaagaagtacacgtgctccactat
gttcatagcagccttatttataatagtcagaagctggaaagaacccagat
gcccctcaacaaaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcttaggcaa
atggatggacctggctggcatcatcctgtgtgaggtaacccaatcacaaa
agaactcaaatgatatgtactcatagagggtgtgggtgggtgggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_89212663_89213806
seq2: B6Ng01-076A13.b_44_1176

seq1  GAATTCTCTATTTAGCTTTGTACTCTACTTTTTAATAGGGTTATTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATTTAGCTTTGTACTCTACTTTTTAATAGGGTTATTTGGTT  50

seq1  CTCTGGAGCCTAAGTTCTTGAGGTCTTTGTATATTTTGGATATTAGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGCCTAAGTTCTTGAGGTCTTTGTATATTTTGGATATTAGCCCT  100

seq1  TTGTCAGATATAGGGCTGATAAAGATCTTTCCCCAATTGTGAACTGCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGATATAGGGCTGATAAAGATCTTTCCCCAATTGTGAACTGCCAC  150

seq1  TTTGTCCTATTGATTGTGTCCTTTGCCTTACAGCTTTCAAATTTTATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCTATTGATTGTGTCCTTTGCCTTACAGCTTTCAAATTTTATGAG  200

seq1  GTCCCATTTGAATCTTTTTGAGAATTTAATATAATTACCCTTTCAACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATTTGAATCTTTTTGAGAATTTAATATAATTACCCTTTCAACTTC  250

seq1  ACTTTCCTCTCTCTAAACAGTCCCACATACAATTTTCCTTTCTTTCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTCTCTCTAAACAGTCCCACATACAATTTTCCTTTCTTTCAAGT  300

seq1  AATTGACAGTTTTTAATTACAAACACACACTAAAATTTAAATTTTTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACAGTTTTTAATTACAAACACACACTAAAATTTAAATTTTTTGCT  350

seq1  ATAATCAAAAACAAAATAATAAACTTCTTTTATTCTGAGGTTGACATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAAAACAAAATAATAAACTTCTTTTATTCTGAGGTTGACATTTT  400

seq1  CCATTTCAATTTGATACAATAGACAATCTTTGCCACTGGACTGGGTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCAATTTGATACAATAGACAATCTTTGCCACTGGACTGGGTAGAT  450

seq1  TTTACTTACTGCATTGTTTTATGTTTTGCTTCTTTTTCCTCCCTCAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTACTGCATTGTTTTATGTTTTGCTTCTTTTTCCTCCCTCAGGTA  500

seq1  ATCATGATTTATATATTTTTAAAAACAACTGAAAAATGAATTCCCTTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATTTATATATTTTTAAAAACAACTGAAAAATGAATTCCCTTAGA  550

seq1  CCTAGACATATCCCAAGTTACTTCATTACTACATAGTGCTTTAGTTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACATATCCCAAGTTACTTCATTACTACATAGTGCTTTAGTTATTT  600

seq1  TCCCAACTTTGTCATCTGATTTAGTTTCCCAACTTAAATCATATCAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTTTGTCATCTGATTTAGTTTCCCAACTTAAATCATATCAATAT  650

seq1  TTACATAATTGAAGTAATCAGTAGTCTTGTCTCTGAATACACTGACTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAATTGAAGTAATCAGTAGTCTTGTCTCTGAATACACTGACTTCC  700

seq1  TCTTTCCTAAATATTTTCTGTCTGTCTGTCAATTCTGCCTTGAGTAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTAAATATTTTCTGTCTGTCTGTCAATTCTGCCTTGAGTAAGGT  750

seq1  GCCCTTAAATGAGGTTATAAGTTTTGAACCTGGGTTTTTTTTCCTGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTAAATGAGGTTATAAGTTTTGAACCTGGGTTTTTTTTCCTGAAAT  800

seq1  TTGCAGGAAAATTTCAAAATATTTATATAAAGGTAGATAAGCAATGGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGAAAATTTCAAAATATTTATATAAAGGTAGATAAGCAATGGGTA  850

seq1  GAATGTAGAAAAGCCAAGAAAATATGTTTTATCAATTGAGTTTTATGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAGAAAAGCCAAGAAAATATGTTTTATCAATTGAGTTTTATGCAG  900

seq1  TAGATAGCAAGATACACCTTGATTCAACACATCCATGACATAAGGCAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCAAGATACACCTTGATTCAACACATCCATGACATAAGGCAACT  950

seq1  TAAATTGCTTTCAGAGTTTTCACAAATGTGGGACAAGACAGCTGCAAGCT  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAAATTGCTTTCAGAGTTTTCACAAATGTGGGAC-AGACAGCTGCAAGCT  999

seq1  TATCTAACAATGTCATGAATAACATTTGTTGAAGAAAGCTTCTGCGGTAT  1050
      ||||||||||||||||||   |||||||||||   |||| ||||||||||
seq2  TATCTAACAATGTCATGA--TACATTTGTTGA--GAAGC-TCTGCGGTAT  1044

seq1  TAACTGTGGCATATTTATAGTTTACCCTACTTACATGGCAGGTGTGCACT  1100
      ||||| |||||| ||||||||||| ||||||||||| ||||| |||||||
seq2  TAACTTTGGCAT-TTTATAGTTTA-CCTACTTACAT-GCAGGGGTGCACT  1091

seq1  GTGAAGAAAGTGTTCTGGTTTGAGAAGTGTCAGTATGTAAGAAA  1144
      |||||| |||| |||||||||||||||||||||||||| |||||
seq2  GTGAAG-AAGT-TTCTGGTTTGAGAAGTGTCAGTATGTTAGAAA  1133


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