BAC Information

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BAC

Clone NameB6Ng01-076C22
Chromosome14 (Build37)
Map Location 111,179,876 - 111,180,861
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk6, EG668772
Downstream geneEG622052, LOC100043491, LOC100043494, Slitrk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076C22.bB6Ng01-076C22.g
ACCDH892525DH892526
length8281,006
definitionDH892525|Mus musculus domesticus DNA, BAC clone: B6Ng01-076C22, 5' end.DH892526|Mus musculus domesticus DNA, BAC clone: B6Ng01-076C22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatatattttggatattagccctttatcaaatgtagggttag
tgaagatcttttcccaacttgtatattgccattttttcttattggcaata
tcctttgtcttaaagaagcttttcagtattttgagatttcacttgtcaca
tttttgtcttagaacttgaaccactggcgttctgttcaagaattttgccc
ttgtgccaatgtattcaaggttatttaccattttctctctaacataagga
caagtactccactatattaatatcaaccttatttgtaatagccagaagct
ggaaacaacccagatgtccctcaactgaataatgaatatagaaaatgtgt
ttcatttacacaatggaatagtagacagatattaaaaacaaggtcatcac
gaattttgcaggcaaatggttggaactagaaaatatcatcctgaccaagg
taacctagtcccaaaaggacatgcatggcatatactcagtgataagtaga
tagtagccagaatactcacggtacaacctatagatcacaagaagtttaac
aagaagaaaggcccaagtgagtctatttcagtcctacttagcagggggta
gaaaataaccttgggaggaagagggagggagaaacataggcgggtgaggt
ggaagggaatgaatatggggtaaagatcagctatgggagagacaggtgag
gagtccaggagaatgaatttaaatatgcagctgcagaggatggaggaatc
ccagagaccttggatgtgagaggctcccaggactcattagggatttaata
actgactttaaaagaaccatatatttac
gaattcttctgacaattggagattccctacagatacttaaaagatcaggc
aacttactttcatatgcaagtatttaccaaggcctagggaaaaggggggt
tgtggtattgcattattcatgagaaggtctgttagagcagaaacccctgg
tgctagctttcacaaggctcaaaggagaagcacaaattgtgattagagtg
tgaaatccttacctgtcattagctgaccctaggcagggctgttttatctt
tactgtaaacattacctggttcctgtcagtccttttgaagtcattcctct
gttttgtttcagataacttcaatgtactttgtctgctgtgacatcctagc
aattgttttctgtattatataagaataagacctgtgttcgctttgtgaca
ttacattcagatccagcacattcccttgtctgtttgccaccccattcttg
ccgactctatgcccatctgtctgagaccctgattcccacggattgagggg
ggctgactgggcccggtctgtggcattattgctaatttttgaccctgtat
tcaagttaactgttcccttggtatatgtttcataccctgtgcatgtcttg
atttagtcatcattctgtgtggctcagtcacttggtgactggaaagagca
agatttggaagagaaaacctcaccctgatggatctgtctgagcactctgc
ggtgatctgtgagaggtattaaccgatactaaactgttctatgattcctt
gaagctggcaagggttcttgaaatagttaccctttattctttgaagggct
aacacactgggaaaataaggactcagttttcattctggagttcttcctcc
tgattgccctgagttgttacttctccttgagttgagaatgctgacattga
aagctgaaatatattcatctttttatttatgtaaggtttttgtagtcagt
gctctagcatgaataatttgggttttctgctgtctgtgagaaattgtgcc
ccagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111179876_111180861
seq2: B6Ng01-076C22.g_95_1075

seq1  CCTACAGATACTTAAAAGATCAGGCAACTTACTTTCATATGCAAGTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGATACTTAAAAGATCAGGCAACTTACTTTCATATGCAAGTATTT  50

seq1  ACCAAGGCCTAGGGAAAAGGGGGGTTGTGGTATTGCATTATTCATGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCCTAGGGAAAAGGGGGGTTGTGGTATTGCATTATTCATGAGAA  100

seq1  GGTCTGTTAGAGCAGAAACCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTAGAGCAGAAACCCCTGGTGCTAGCTTTCACAAGGCTCAAAGG  150

seq1  AGAAGCACAAATTGTGATTAGAGTGTGAAATCCTTACCTGTCATTAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCACAAATTGTGATTAGAGTGTGAAATCCTTACCTGTCATTAGCTG  200

seq1  ACCCTAGGCAGGGCTGTTTTATCTTTACTGTAAACATTACCTGGTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGGCAGGGCTGTTTTATCTTTACTGTAAACATTACCTGGTTCCTG  250

seq1  TCAGTCCTTTTGAAGTCATTCCTCTGTTTTGTTTCAGATAACTTCAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCTTTTGAAGTCATTCCTCTGTTTTGTTTCAGATAACTTCAATGT  300

seq1  ACTTTGTCTGCTGTGACATCCTAGCAATTGTTTTCTGTATTATATAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCTGCTGTGACATCCTAGCAATTGTTTTCTGTATTATATAAGAA  350

seq1  TAAGACCTGTGTTCGCTTTGTGACATTACATTCAGATCCAGCACATTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCTGTGTTCGCTTTGTGACATTACATTCAGATCCAGCACATTCCC  400

seq1  TTGTCTGTTTGCCACCCCATTCTTGCCGACTCTATGCCCATCTGTCTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTTTGCCACCCCATTCTTGCCGACTCTATGCCCATCTGTCTGAG  450

seq1  ACCCTGATTCCCACGGATTGAGGGGGGCTGACTGGGCCCGGTCTGTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGATTCCCACGGATTGAGGGGGGCTGACTGGGCCCGGTCTGTGGCA  500

seq1  TTATTGCTAATTTTTGACCCTGTATTCAAGTTAACTGTTCCCTTGGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTAATTTTTGACCCTGTATTCAAGTTAACTGTTCCCTTGGTATA  550

seq1  TGTTTCATACCCTGTGCATGTCTTGATTTAGTCATCATTCTGTGTGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATACCCTGTGCATGTCTTGATTTAGTCATCATTCTGTGTGGCTC  600

seq1  AGTCACTTGGTGACTGGAAAGAGCAAGATTTGGAAGAGAAAACCTCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTGGTGACTGGAAAGAGCAAGATTTGGAAGAGAAAACCTCACCC  650

seq1  TGATGGATCTGTCTGAGCACTCTGCGGTGATCTGTGAGAGGTATTAACCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGATCTGTCTGAGCACTCTGCGGTGATCTGTGAGAGGTATTAACCG  700

seq1  ATACTAAACTGTTCTATGATTCCTTGAAGCTGGCAAGGGTTCTTGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAACTGTTCTATGATTCCTTGAAGCTGGCAAGGGTTCTTGAAATA  750

seq1  GTTACCCTTTATTC-TTGAAGGGCTAACACACTGGGAAAATAAGGACTCA  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTACCCTTTATTCTTTGAAGGGCTAACACACTGGGAAAATAAGGACTCA  800

seq1  GTTTTCATTCTGGAGTTCTTCCTCCTGATTGCCCTGAGTTGTTACTTCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATTCTGGAGTTCTTCCTCCTGATTGCCCTGAGTTGTTACTTCTC  850

seq1  CTTGAGTTGAGAATGCTGACATTGAAGGCTGAAAATATATTCATCTTTTT  899
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  CTTGAGTTGAGAATGCTGACATTGAAAGCTG-AAATATATTCATCTTTTT  899

seq1  AATTTATGTAAGGTTTTTGTAGTCAGTGCTCTAAGCAATGAATAATTTGG  949
       ||||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  -ATTTATGTAAGGTTTTTGTAGTCAGTGCTCT-AGC-ATGAATAATTTGG  946

seq1  GTTTTCTGCTGTTCTGTGAGAAAATTGTGCCCCAGGA  986
      ||||||||||| |||||||| ||||||||||||||||
seq2  GTTTTCTGCTG-TCTGTGAG-AAATTGTGCCCCAGGA  981