BAC Information

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BAC

Clone NameB6Ng01-076M12
Chromosome14 (Build37)
Map Location 12,661,622 - 12,793,844
singlet/doubletdoublet
Overlap genePtprg
Upstream geneFhit, LOC100041974, LOC667030, EG382843, LOC100042427, LOC667059, LOC100041996
Downstream geneLOC100042441, 3830406C13Rik, EG667072, Fezf2, Cadps, EG432822, LOC100042022
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076M12.bB6Ng01-076M12.g
ACCDH892945DH892946
length948896
definitionDH892945|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M12, 5' end.DH892946|Mus musculus domesticus DNA, BAC clone: B6Ng01-076M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,661,622 - 12,662,571)(12,792,950 - 12,793,844)
sequence
gaattcttaaccctctttttgaaaaataattaactattttttcaaaatta
tatatatgtatatgtgtttttgcttgtgtgtatgtctatacagtatgtgt
gtgcagtgcccttagattccagaagagggtgtcagatctcttgggactag
agttacagatgattgtgggccaccatgtgggtgctggcaaccagactgtg
aaagggcagctggtgttcctcaccacttagccatctctccagctcctctg
atcctcctgcctctacctgctgagtgataggattacaggcatgtgctgct
gcacagctgatcttatgcagttctggggctcaaaccctgggcctcctgcc
tgctagacaagcacactccctgaggaagcctcgccacattctagccttca
ttcacatgcagcaggtcaccccctgaggaagcctccccatgctctgtgcc
ttcattcacatgcagcagatctatttagagctgtttctttaggaaaacca
cagagatcatagtgcataaggccacttcactgccccttcctacacacagt
tccttttaaactttcaagataagtctcaaatcattgcatcctggaagcac
cctggcctcctgactcccctggtcatctgcccttttattctctccatttt
ctgttcacttcattctatgtgtttgctttcaaaggttttatttgggcaaa
gtgaacaccttcggcttatggaattgccttgaggccaatttgttgcagaa
aattgtttggaaaagactgtgcgtatgagaccaaatgcatgtgtggacac
acacacacacacacacacacacacacacacacacggtttgggggagaaga
taaagaaagctttccagtgctgaggtcaatatggtttctccttgtgcttc
agggttctaatattttgaaatccttgagcatcagcctttgtacctgaa
gaattcaagaaacatttggatttccattccaataaagctttagtttttgc
aaggggaatgtgattatctaaattcatacaaaagtttctcttttaaactg
ctccaggctcactctcctttttgttccctctaaagttgattcattcattc
atttaacaaattcttattggctgctaaatacacggaagctgccaatcgat
acactgattggcttaggaccaaaggcaagcctgtgttggagaagggaagc
actcgggttctcattgtctcctcttcctaaaaaggtcccagtcacagccg
tgcagaggaatcctgcatgagaattaggtccgaataaaagatagggacta
gactaatgacccatttctggaacagggcaattagtctcagtgctttgcta
tggaaaggaagcattagtggggagagaaggagccctgatcacatcaatcc
ccctttattgcattcaaaaggcacttgttcaccaacttttgaaaaataca
cagcaaacgttcaattactgggacagtgcattaaaggataaaatgaagta
aaagcaagcgtttcttgtgccaatttaaacaagctatggcatcgctccag
tgctgctctgtttggggcatgctttagaatagaggtcggcacactttccc
tttaatggccattagtaaatatttaggatttgagagcattgagcctctgg
tggagacttggttaggatagaaagcagaagagaccatatgcaaatgaaca
aatgagactacattgtacaaaaacgtattttaatcacattgaaacttgaa
ctcaatgggaatttttatgcatcataaagtattatcctctgattgtgtgt
gtgtgtgtgtgtgcatgcgtgcacgcacgtgtgcgtgtattctcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12661622_12662571
seq2: B6Ng01-076M12.b_44_991

seq1  GAATTCTTAACCCTCTTTTTGAAAAATAATTTACTATTTTTTCAAAATTA  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAATTCTTAACCCTCTTTTTGAAAAATAATTAACTATTTTTTCAAAATTA  50

seq1  TATATATGTATATGTGTTTTTGCTTGTGTGTATGTCTATACAGTATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGTATATGTGTTTTTGCTTGTGTGTATGTCTATACAGTATGTGT  100

seq1  GTGCAGTGCCCTTAGATTCCAGAAGAGGGTGTCAGATCTCTTGGGACTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTGCCCTTAGATTCCAGAAGAGGGTGTCAGATCTCTTGGGACTAG  150

seq1  AGTTACAGATGATTGTGGGCCACCATGTGGGTGCTGGCAACCAGACTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGATGATTGTGGGCCACCATGTGGGTGCTGGCAACCAGACTGTG  200

seq1  AAAGGGCAGCTGGTGTTCCTCACCACTTAGCCATCTCTCCAGCTCCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCAGCTGGTGTTCCTCACCACTTAGCCATCTCTCCAGCTCCTCTG  250

seq1  ATCCTCCTGCCTCTACCTGCTGAGTGATAGGATTACAGGCATGTGCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTGCCTCTACCTGCTGAGTGATAGGATTACAGGCATGTGCTGCT  300

seq1  GCACAGCTGATCTTATGCAGTTCTGGGGCTCAAACCCTGGGCCTCCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCTGATCTTATGCAGTTCTGGGGCTCAAACCCTGGGCCTCCTGCC  350

seq1  TGCTAGACAAGCACACTCCCTGAGGAAGCCTCGCCACATTCTAGCCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGACAAGCACACTCCCTGAGGAAGCCTCGCCACATTCTAGCCTTCA  400

seq1  TTCACATGCAGCAGGTCACCCCCTGAGGAAGCCTCCCCATGCTCTGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATGCAGCAGGTCACCCCCTGAGGAAGCCTCCCCATGCTCTGTGCC  450

seq1  TTCATTCACATGCAGCAGATCTATTTAGAGCTGTTTCTTTAGGAAAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCACATGCAGCAGATCTATTTAGAGCTGTTTCTTTAGGAAAACCA  500

seq1  CAGAGATCATAGTGCATAAGGCCACTTCACTGCCCCTTCCTACACACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATCATAGTGCATAAGGCCACTTCACTGCCCCTTCCTACACACAGT  550

seq1  TCCTTTTAAACTTTCAAGATAAGTCTCAAATCATTGCATCCTGGAAGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTAAACTTTCAAGATAAGTCTCAAATCATTGCATCCTGGAAGCAC  600

seq1  CCTGGCCTCCTGACTCCCCTGGTCATCTGCCCTTTTATTCTCTCCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCTCCTGACTCCCCTGGTCATCTGCCCTTTTATTCTCTCCATTTT  650

seq1  CTGTTCACTTCATTCTATGTGTTTGCTTTCAAAGGTTTTATTTGGGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCACTTCATTCTATGTGTTTGCTTTCAAAGGTTTTATTTGGGCAAA  700

seq1  GTGAACACCTTCGGCTTATGGAATTGCCTTGAGGCCAATTTGTTGCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACACCTTCGGCTTATGGAATTGCCTTGAGGCCAATTTGTTGCAGAA  750

seq1  AATTGTTTGGAAAAGACTGTGCGTATGAGACCAAATGCATGTGTGGACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTTGGAAAAGACTGTGCGTATGAGACCAAATGCATGTGTGGACAC  800

seq1  ACACACACACACACACACACACACACACACACACGGTTTGGGGGAGAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACGGTTTGGGGGAGAAGA  850

seq1  TAAAGAAAGCTTTCCAGTGCTGAGGTCAAATATGGTTTCTCCTTGTGCTC  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  TAAAGAAAGCTTTCCAGTGCTGAGGTC-AATATGGTTTCTCCTTGTGCTT  899

seq1  AAGGGTTCTAATATTTTGAAATCCTTTGAGCATCAGCCTTTGTACCTGAA  950
       ||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGGGTTCTAATATTTTGAAATCC-TTGAGCATCAGCCTTTGTACCTGAA  948

seq1: chr14_12792950_12793844
seq2: B6Ng01-076M12.g_72_967 (reverse)

seq1  ACGGGAATACACGCACACGTGCGTGCACGCATGCACACACACACACACAC  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAATACACGCACACGTGCGTGCACGCATGCACACACACACACACAC  50

seq1  ACAATCAGAGGAATAATACTTTATGATGCATAAAAATT-CCATTGAGTTC  99
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  ACAATCAGAGG-ATAATACTTTATGATGCATAAAAATTCCCATTGAGTTC  99

seq1  AAGTTTCAATGTGATTAAATAACGTTTTTGTACAATGTAGTCTCATTTGT  149
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  AAGTTTCAATGTGATTAAAATACGTTTTTGTACAATGTAGTCTCATTTGT  149

seq1  TCATTTGCATATGGTCTCTTTCTGC-TTCTATCCT-ACCAAGTCTCCACC  197
      |||||||||||||||||| |||||| ||||||||| ||||||||||||||
seq2  TCATTTGCATATGGTCTC-TTCTGCTTTCTATCCTAACCAAGTCTCCACC  198

seq1  AGAGGCTCAATGCTCTCAAATCCTAAAATATTTACTAATGGCCATTAAAG  247
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGAGGCTCAATGCTCTCAAATCCT-AAATATTTACTAATGGCCATTAAAG  247

seq1  GGAAAGTGTGCCGACCTCTATTCTAAAGCATGCCCCAAACAGAGCAGCAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTGTGCCGACCTCTATTCTAAAGCATGCCCCAAACAGAGCAGCAC  297

seq1  TGGAGCGATGCCATAGCTTGTTT-AATTGGCACAAGAAACGCTTGCTTTT  346
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGGAGCGATGCCATAGCTTGTTTAAATTGGCACAAGAAACGCTTGCTTTT  347

seq1  ACTTCATTTTATCCTTTAATGCACTGTCCCAGTAATTGAACGTTTGCTGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTTTATCCTTTAATGCACTGTCCCAGTAATTGAACGTTTGCTGT  397

seq1  GTATTTTTCAAAAGTTGGTGAACAAGTGCCTTTTGAATGCAATAAAGGGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTCAAAAGTTGGTGAACAAGTGCCTTTTGAATGCAATAAAGGGG  447

seq1  GATTGATGTGATCAGGGCTCCTTCTCTCCCCACTAATGCTTCCTTTCCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATGTGATCAGGGCTCCTTCTCTCCCCACTAATGCTTCCTTTCCAT  497

seq1  AGCAAAGCACTGAGACTAATTGCCCTGTTCCAGAAATGGGTCATTAGTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGCACTGAGACTAATTGCCCTGTTCCAGAAATGGGTCATTAGTCT  547

seq1  AGTCCCTATCTTTTATTCGGACCTAATTCTCATGCAGGATTCCTCTGCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTATCTTTTATTCGGACCTAATTCTCATGCAGGATTCCTCTGCAC  597

seq1  GGCTGTGACTGGGACCTTTTTAGGAAGAGGAGACAATGAGAACCCGAGTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGACTGGGACCTTTTTAGGAAGAGGAGACAATGAGAACCCGAGTG  647

seq1  CTTCCCTTCTCCAACACAGGCTTGCCTTTGGTCCTAAGCCAATCAGTGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTCTCCAACACAGGCTTGCCTTTGGTCCTAAGCCAATCAGTGTA  697

seq1  TCGATTGGCAGCTTCCGTGTATTTAGCAGCCAATAAGAATTTGTTAAATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTGGCAGCTTCCGTGTATTTAGCAGCCAATAAGAATTTGTTAAATG  747

seq1  AATGAATGAATCAACTTTAGAGGGAACAAAAAGGAGAGTGAGCCTGGAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGAATCAACTTTAGAGGGAACAAAAAGGAGAGTGAGCCTGGAGC  797

seq1  AGTTTAAAAGAGAAACTTTTGTATGAATTTAGATAATCACATTCCCCTTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAAAGAGAAACTTTTGTATGAATTTAGATAATCACATTCCCCTTG  847

seq1  CAAAAACTAAAGCTTTATTGGAATGGAAATCCAAATGATTCTTGAATTC  895
      ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAAAAACTAAAGCTTTATTGGAATGGAAATCCAAATGTTTCTTGAATTC  896