BAC Information

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BAC

Clone NameB6Ng01-076P21
Chromosome14 (Build37)
Map Location 85,747,346 - 85,838,060
singlet/doubletdoublet
Overlap genenone
Upstream genePcdh17, 9630013A20Rik, LOC629794
Downstream geneLOC668603, LOC100043301, EG629815, LOC100043306, LOC100043778
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076P21.bB6Ng01-076P21.g
ACCDH893087DH893088
length1,143656
definitionDH893087|Mus musculus domesticus DNA, BAC clone: B6Ng01-076P21, 5' end.DH893088|Mus musculus domesticus DNA, BAC clone: B6Ng01-076P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,836,928 - 85,838,060)(85,747,346 - 85,747,969)
sequence
gaattctgttagaaatgcacatttaaatttgtgttttagtcagatgtgtg
tttctgctattgaaataatagcagatgtggattactcaatcattctttag
agtaagtgactttcttggaatggttcctgaatatgagaggaagatgtctt
agtttattgtgttttccaaccaaaagttgaaattttaaaatgatatttaa
tttacttttaacaaatttatatataagtactatattccataattttccta
tctcctctctccaaatcctcccttatactaaccacacatttctcttatcc
attacatacatatgtatgaacataatgatatatatcataaagtgtatcat
aaataatatatcataaataaaaatcatatgatatgtatatcataaattaa
attggaaaaatttgtttctttctttccatatgcatatgctttcaagaata
actggagctgtataacatttcaggaggcacagttctagagaaggctgatt
agacatttctcagcaacaattaattgcctgtagcttttcatttaaggagg
gatcctgtcaaatttctgccaggtttgagtaatcttgaagatagtagggc
aatgtatgactgagaaaccctccttagagcatggcatattgatatctttt
tccataactaaaatttactctcaattctgatgagttctctctacatttta
cagacatagcagtttatgactactttcttgtgtatttcctcctttccctg
ggttcttagcaccgtattctcactaaatacttcttctcaaaggctaagga
tatataagcaatatatagtcaagaggtttaagccgtgcgggtagctcagt
aggtattacatttaatgcacaaacatgaagacctgagttcagtccccaaa
actcacataaaatatgtccaggatgaatgtatgtgctggaaattctagtg
ctagtgagacaagaattgaattcctggtgctcactggcacctaggctagc
cagcttagcctaattagggagcaccaggccattgagaagactgtctcaaa
agtaagtgatcaaatcagagtattcaaccctgccccttgcctaatgtctc
cccgtatggcattttaccaacagggttccgaagagagaggttg
gaattcttctggaatcctgattggtgtggctacaggagattccaggtaaa
atgtatttagaggtactaggatctgatactgaggaatgtgtatgggtttg
aaggggtgctgaaagtgtccataggaggaaggaatgtgtggtgttccacc
aggatctgtttaattccttaaaaatgaggaaggggagtgagtagaggcct
tggctggtcacctaataaagaggttgggtgagactgagggattatagaaa
aaaagaaagagtttgaaaccagcagtgagcctctctgcttcctttgctgg
agcaacttgtagatttccagggcatgtgtaaaaccccaggttgggggcta
ggataaagcaatgtgtagaggaagggaagtaagagagaaagatctctgac
cccctggagactggggcaaatgtaggggagaaggcttcagtagagtctgt
aacagacctggggtaagactagaggactggttttggaggagctgagggaa
aggagatctgcagttaccctacctgctttatcatgaaaatgaaagatcag
ccagaaagtccaatggaaatatggagaccgtttcctaagatgaggaagac
gttagggattctgaagactcagccatagcagatgaaaaggggtggggggg
gggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85836928_85838060
seq2: B6Ng01-076P21.b_46_1188 (reverse)

seq1  CAACCTCTCT----GGA--CCTG-TGGT-AAATGCCATAC-GTGAGACA-  40
      ||||||||||    |||  |||| |||| ||||||||||| | |||||| 
seq2  CAACCTCTCTCTTCGGAACCCTGTTGGTAAAATGCCATACGGGGAGACAT  50

seq1  TAGGCAAGGGGCAGGGT--GATACTCTGATTTTGATCAACTTACTTTTGA  88
      |||||||||||||||||   ||||||||| ||||||| ||||||||||||
seq2  TAGGCAAGGGGCAGGGTTGAATACTCTGA-TTTGATC-ACTTACTTTTGA  98

seq1  GACAGTC-TCTCAATGGCCTGGTGCTCCCTAATTAGGCTAAGCTGGCTAG  137
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCTTCTCAATGGCCTGGTGCTCCCTAATTAGGCTAAGCTGGCTAG  148

seq1  CCTAGGTGCCAGTGAGCACCAGGAATTCAATTCTTTGTCTCACTAGCACT  187
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCTAGGTGCCAGTGAGCACCAGGAATTCAATTC-TTGTCTCACTAGCACT  197

seq1  AGAATTTCCAGCACATACATTCATCCTGGACATATTTTATGTGAGTTTTG  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCCAGCACATACATTCATCCTGGACATATTTTATGTGAGTTTTG  247

seq1  GGGACTGAACTCAGGTCTTCATGTTTGTGCATTAAATGTAATACCTACTG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGAACTCAGGTCTTCATGTTTGTGCATTAAATGTAATACCTACTG  297

seq1  AGCTACCCGCACGGCTTAAACCTCTTGACTATATATTGCTTATATATCCT  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCCGCACGGCTTAAACCTCTTGACTATATATTGCTTATATATCCT  347

seq1  TAGCCTTTGAGAAGAAGTATTTAGTGAGAATACGGTGCTAAGAACCCAGG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTGAGAAGAAGTATTTAGTGAGAATACGGTGCTAAGAACCCAGG  397

seq1  GAAAGGAGGAAATACACAAGAAAGTAGTCATAAACTGCTATGTCTGTAAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGGAAATACACAAGAAAGTAGTCATAAACTGCTATGTCTGTAAA  447

seq1  ATGTAGAGAGAACTCATCAGAATTGAGAGTAAATTTTAGTTATGGAAAAA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGAGAACTCATCAGAATTGAGAGTAAATTTTAGTTATGGAAAAA  497

seq1  GATATCAATATGCCATGCTCTAAGGAGGGTTTCTCAGTCATACATTGCCC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAATATGCCATGCTCTAAGGAGGGTTTCTCAGTCATACATTGCCC  547

seq1  TACTATCTTCAAGATTACTCAAACCTGGCAGAAATTTGACAGGATCCCTC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTTCAAGATTACTCAAACCTGGCAGAAATTTGACAGGATCCCTC  597

seq1  CTTAAATGAAAAGCTACAGGCAATTAATTGTTGCTGAGAAATGTCTAATC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATGAAAAGCTACAGGCAATTAATTGTTGCTGAGAAATGTCTAATC  647

seq1  AGCCTTCTCTAGAACTGTGCCTCCTGAAATGTTATACAGCTCCAGTTATT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTCTAGAACTGTGCCTCCTGAAATGTTATACAGCTCCAGTTATT  697

seq1  CTTGAAAGCATATGCATATGGAAAGAAAGAAACAAATTTTTCCAATTTAA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGCATATGCATATGGAAAGAAAGAAACAAATTTTTCCAATTTAA  747

seq1  TTTATGATATACATATCATATGATTTTTATTTATGATATATTATTTATGA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATATACATATCATATGATTTTTATTTATGATATATTATTTATGA  797

seq1  TACACTTTATGATATATATCATTATGTTCATACATATGTATGTAATGGAT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTTATGATATATATCATTATGTTCATACATATGTATGTAATGGAT  847

seq1  AAGAGAAATGTGTGGTTAGTATAAGGGAGGATTTGGAGAGAGGAGATAGG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATGTGTGGTTAGTATAAGGGAGGATTTGGAGAGAGGAGATAGG  897

seq1  AAAATTATGGAATATAGTACTTATATATAAATTTGTTAAAAGTAAATTAA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATGGAATATAGTACTTATATATAAATTTGTTAAAAGTAAATTAA  947

seq1  ATATCATTTTAAAATTTCAACTTTTGGTTGGAAAACACAATAAACTAAGA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTTTAAAATTTCAACTTTTGGTTGGAAAACACAATAAACTAAGA  997

seq1  CATCTTCCTCTCATATTCAGGAACCATTCCAAGAAAGTCACTTACTCTAA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCTCTCATATTCAGGAACCATTCCAAGAAAGTCACTTACTCTAA  1047

seq1  AGAATGATTGAGTAATCCACATCTGCTATTATTTCAATAGCAGAAACACA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATTGAGTAATCCACATCTGCTATTATTTCAATAGCAGAAACACA  1097

seq1  CATCTGACTAAAACACAAATTTAAATGTGCATTTCTAACAGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGACTAAAACACAAATTTAAATGTGCATTTCTAACAGAATTC  1143

seq1: chr14_85747346_85747969
seq2: B6Ng01-076P21.g_99_722

seq1  CAGGAGATTCCAGGTAAAATGTATTTAGAGGTACTAGGATCTGATACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATTCCAGGTAAAATGTATTTAGAGGTACTAGGATCTGATACTGA  50

seq1  GGAATGTGTATGGGTTTGAAGGGGTGCTGAAAGTGTCCATAGGAGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGTATGGGTTTGAAGGGGTGCTGAAAGTGTCCATAGGAGGAAGG  100

seq1  AATGTGTGGTGTTCCACCAGGATCTGTTTAATTCCTTAAAAATGAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGGTGTTCCACCAGGATCTGTTTAATTCCTTAAAAATGAGGAAG  150

seq1  GGGAGTGAGTAGAGGCCTTGGCTGGTCACCTAATAAAGAGGTTGGGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGAGTAGAGGCCTTGGCTGGTCACCTAATAAAGAGGTTGGGTGAG  200

seq1  ACTGAGGGATTATAGAAAAAAAGAAAGAGTTTGAAACCAGCAGTGAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGGATTATAGAAAAAAAGAAAGAGTTTGAAACCAGCAGTGAGCCT  250

seq1  CTCTGCTTCCTTTGCTGGAGCAACTTGTAGATTTCCAGGGCATGTGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCCTTTGCTGGAGCAACTTGTAGATTTCCAGGGCATGTGTAAA  300

seq1  ACCCCAGGTTGGGGGCTAGGATAAAGCAATGTGTAGAGGAAGGGAAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGGTTGGGGGCTAGGATAAAGCAATGTGTAGAGGAAGGGAAGTAA  350

seq1  GAGAGAAAGATCTCTGACCCCCTGGAGACTGGGGCAAATGTAGGGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGATCTCTGACCCCCTGGAGACTGGGGCAAATGTAGGGGAGAA  400

seq1  GGCTTCAGTAGAGTCTGTAACAGACCTGGGGTAAGACTAGAGGACTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAGTAGAGTCTGTAACAGACCTGGGGTAAGACTAGAGGACTGGTT  450

seq1  TTGGAGGAGCTGAGGGAAAGGAGATCTGCAGTTACCCTACCTGCTTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGAGCTGAGGGAAAGGAGATCTGCAGTTACCCTACCTGCTTTATC  500

seq1  ATGAAAATGAAAGATCAGCCAGAAAGTCCAATGGAAATATGGAGACCGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATGAAAGATCAGCCAGAAAGTCCAATGGAAATATGGAGACCGTT  550

seq1  TCCTAAGATGAGGAAGACGTTAGGGATTCTGAAGACTCAGCCATAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGATGAGGAAGACGTTAGGGATTCTGAAGACTCAGCCATAGCAGA  600

seq1  TGAAAAGGGGTGGGGGGGGGGAGA  624
      ||||||||||||||||||||||||
seq2  TGAAAAGGGGTGGGGGGGGGGAGA  624