BAC Information

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BAC

Clone NameB6Ng01-077F05
Chromosome2 (Build37)14 (Build37)
Map Location 142,776,681 - 142,777,69850,766,702 - 50,767,937
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077F05.bB6Ng01-077F05.g
ACCDH893332DH893333
length1,0051,212
definitionDH893332|Mus musculus domesticus DNA, BAC clone: B6Ng01-077F05, 5' end.DH893333|Mus musculus domesticus DNA, BAC clone: B6Ng01-077F05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,681 - 142,777,698)(50,766,702 - 50,767,937)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttatgataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggaatttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagatatgtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataagtgtgtgggttcatttctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattcctccagaggttcttt
tatccttgagaagagtttttgctatcctagattttttgttatttccagat
gaatttgcaaattgctccttctaatttgttgaagaattgtgttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagagacttgaagtttttatcat
acagatctttcacttccttagttacagtcacgccgagatatttatatatt
tgtgactattgaaaaggtgtgtttccctaatttctttctcagcctgttta
ttctt
gaattctttccttaagcactttctctctcttagtgagctcctatgtcata
attcttgtcacagtttggttcaagtcctctgctgccatggccaaggcatt
ttctacactggctgctcacatcatggtagtagtattattctttggtcctt
gcatcttcatttatgtgtggccatttactacctatcctgtggataaaatt
cttgctatattttatacagttttcactccgatccttaatcccattattta
cacactaagaaatagagacatgaaagctgtcatgggaaaaattgctgctc
attatctcagacctcccaaagtagctgaaatgtcatttgtagcgagaatt
tctctttattgaagtaaaactcaaattattcaaaccaattgtctacttgc
aaatattttcataaagtagagtaaataaaaataataatatagaaaaaatt
gatggatattaacaagtatttttatagttattacataagcaaaaatttag
tatcctccccgcaaagaaaaaaggtactatgtgtttgattattaatagaa
gaaataaaacaagaaaaaattcagagtggtatgtatgcactaattgcctt
ggtaataggtaaatgtaagcatgatctaaaaaccaaaacccaaactaaac
aaaacacccacaaatctggatccaattcattactagaaataaatttaaaa
cttttatcttactatttttcttagagaagtgtctacaaaccgcatgcaat
gactttaagaccttatggcttcgttttcttaagttcagtggatagccaat
ctactgatttatgaaaaagtgcatgagcatagtaggattcttaggttaag
agaatgctccgggggtatcaattaaacataaacaaaataatttttctata
atcatactttagcatatgggttgttccataatcaaatcatgtatttcatt
tttcttttttgatttaaaattatgtatttatgtaaatgtatctcttatca
gagtgattctgtttgcatttaaattattagcagtaaagagtccacaggga
tctaaaatactattctacatcagctttaatcatttataaaacagcttcaa
gtctacatttgtaccaattaccagttcttcagtgaatttaaggaagaaac
caagcctatggtagcagttactcaatgggattgtaccactgagagagatt
ctctctgcggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776681_142777698
seq2: B6Ng01-077F05.b_51_608 (reverse)

seq1  CAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACAC  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAAGTAGACCAATGGAACAGAATTGAAGACCCAGAAATGAACCCACACAC  50

seq1  CTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGAGGAAGA  100
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGA  100

seq1  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGT  150

seq1  AGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATC  200
      ||||||||| |||| ||||||||| |||||||||||||||||||||||||
seq2  AGAAGAATGCGAATTGATCCATACATATCTCCTTGTACTAAGGTCAAATC  200

seq1  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAG  250

seq1  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGACAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTC  300

seq1  CTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATG  350

seq1  GGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATA  400
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGACCTAATGAAATTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATA  400

seq1  AGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCATAAA  450

seq1  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGA  500

seq1  CTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCACAAAACCATC  550
      |||||||||||||||||||||||||||||||||||||||| ||       
seq2  CTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAA-------  543

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  600
           ||| |||||    |||                             
seq2  ---CTGAACAAAGA----ATTC----------------------------  558

seq1  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  650
                                                        
seq2  --------------------------------------------------  558

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  700
                                                        
seq2  --------------------------------------------------  558

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  750
                                                        
seq2  --------------------------------------------------  558

seq1  GGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTAAGATCGAGAA  800
                                                        
seq2  --------------------------------------------------  558

seq1  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  850
                                                        
seq2  --------------------------------------------------  558

seq1  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  900
                                                        
seq2  --------------------------------------------------  558

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  950
                                                        
seq2  --------------------------------------------------  558

seq1  AGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  1000
                                                        
seq2  --------------------------------------------------  558

seq1  GAACTGAACAAAGAATTC  1018
                        
seq2  ------------------  558

seq1: chr14_50766702_50767937
seq2: B6Ng01-077F05.g_66_1277 (reverse)

seq1  AGCCGCAGGAAGAAATCT-TCTCAGTGGTACAAATCACCAAATGAGTACA  49
      ||||||||  || ||||| ||||||||||||||    || | ||||||  
seq2  AGCCGCAGAGAG-AATCTCTCTCAGTGGTACAA---TCCCATTGAGTAAC  46

seq1  TGCTTAACATTAGCTTTTGATCTCTTCCTTTTAAATCCACTGAGAAACTT  99
      ||| || |||  ||  ||| | ||||||  |||||| ||||||  |||| 
seq2  TGC-TACCATAGGC--TTGGTTTCTTCC--TTAAATTCACTGAAGAACTG  91

seq1  GTATTTGGTACAAATGTAGACTTGAAAGCTGTTTATATAATGAATTTAAA  149
      ||| |||||||||||||||||||| ||||||||| |||||   |||  ||
seq2  GTAATTGGTACAAATGTAGACTTG-AAGCTGTTT-TATAAATGATT--AA  137

seq1  AGCTGATGTAGAAATAGTTATTTAGATTCCTGTGGACTCTTTTACTGCTA  199
      ||||||||||| ||||||  ||||||| ||||||||||| ||||||||||
seq2  AGCTGATGTAG-AATAGTATTTTAGATCCCTGTGGACTC-TTTACTGCTA  185

seq1  ATAATTTTAAATGCAAACAGAATCACTCTGATTAAAGAGATACATTTACA  249
      |||| |||||||||||||||||||||||||||  ||||||||||||||||
seq2  ATAA-TTTAAATGCAAACAGAATCACTCTGAT--AAGAGATACATTTACA  232

seq1  TAAATACATAATTTTTAAAATTCAAAAAAAGAAAAATTGAAATACATGAT  299
      |||||||||||||||  ||||   |||||||||||| |||||||||||| 
seq2  TAAATACATAATTTT--AAAT--CAAAAAAGAAAAA-TGAAATACATGA-  276

seq1  TTTGATTATGGAACAACCCATATGCTAAAGTATGATTATAGAAAAATTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTATGGAACAACCCATATGCTAAAGTATGATTATAGAAAAATTAT  326

seq1  TTTGTTTATGTTTAATTGATACCCCCGGAGCATTCTCTTAACCTAAGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTATGTTTAATTGATACCCCCGGAGCATTCTCTTAACCTAAGAAT  376

seq1  CCTACTATGCTCATGCACTTTTTTCATAAATCAGTAGATTGGCTATCCAC  449
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTACTATGCTCATGCAC-TTTTTCATAAATCAGTAGATTGGCTATCCAC  425

seq1  TGAACTTAAGAAAACGAAGCCATAAGGTCTTAAAGTCATTGCATGCGGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTAAGAAAACGAAGCCATAAGGTCTTAAAGTCATTGCATGCGGTT  475

seq1  TGTAGACACTTCTCTAAGAAAAATAGTAAGATAAAAGTTTTAAATTTATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACACTTCTCTAAGAAAAATAGTAAGATAAAAGTTTTAAATTTATT  525

seq1  TCTAGTAATGAATTGGATCCAGATTTGTGGGTGTTTTGTTTAGTTTGGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAATGAATTGGATCCAGATTTGTGGGTGTTTTGTTTAGTTTGGGT  575

seq1  TTTGGTTTTTAGATCATGCTTACATTTACCTATTACCAAGGCAATTAGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTAGATCATGCTTACATTTACCTATTACCAAGGCAATTAGTG  625

seq1  CATACATACCACTCTGAATTTTTTCTTGTTTTATTTCTTCTATTAATAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACCACTCTGAATTTTTTCTTGTTTTATTTCTTCTATTAATAAT  675

seq1  CAAACACATAGTACCTTTTTTCTTTGCGGGGAGGATACTAAATTTTTGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATAGTACCTTTTTTCTTTGCGGGGAGGATACTAAATTTTTGCT  725

seq1  TATGTAATAACTATAAAAATACTTGTTAATATCCATCAATTTTTTCTATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATAACTATAAAAATACTTGTTAATATCCATCAATTTTTTCTATA  775

seq1  TTATTATTTTTATTTACTCTACTTTATGAAAATATTTGCAAGTAGACAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTTTATTTACTCTACTTTATGAAAATATTTGCAAGTAGACAAT  825

seq1  TGGTTTGAATAATTTGAGTTTTACTTCAATAAAGAGAAATTCTCGCTACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGAATAATTTGAGTTTTACTTCAATAAAGAGAAATTCTCGCTACA  875

seq1  AATGACATTTCAGCTACTTTGGGAGGTCTGAGATAATGAGCAGCAATTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACATTTCAGCTACTTTGGGAGGTCTGAGATAATGAGCAGCAATTTT  925

seq1  TCCCATGACAGCTTTCATGTCTCTATTTCTTAGTGTGTAAATAATGGGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGACAGCTTTCATGTCTCTATTTCTTAGTGTGTAAATAATGGGAT  975

seq1  TAAGGATCGGAGTGAAAACTGTATAAAATATAGCAAGAATTTTATCCACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATCGGAGTGAAAACTGTATAAAATATAGCAAGAATTTTATCCACA  1025

seq1  GGATAGGTAGTAAATGGCCACACATAAATGAAGATGCAAGGACCAAAGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGTAGTAAATGGCCACACATAAATGAAGATGCAAGGACCAAAGAA  1075

seq1  TAATACTACTACCATGATGTGAGCAGCCAGTGTAGAAAATGCCTTGGCCA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTACTACCATGATGTGAGCAGCCAGTGTAGAAAATGCCTTGGCCA  1125

seq1  TGGCAGCAGAGGACTTGAACCAAACTGTGACAAGAATTATGACATAGGAG  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGCAGAGGACTTGAACCAAACTGTGACAAGAATTATGACATAGGAG  1175

seq1  CTCACTAAGAGAGAGAAAGTGCTTAAGGAAAGAATTC  1236
      |||||||||||||||||||||||||||||||||||||
seq2  CTCACTAAGAGAGAGAAAGTGCTTAAGGAAAGAATTC  1212