BAC Information

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BAC

Clone NameB6Ng01-077I02
Chromosome14 (Build37)
Map Location 45,230,521 - 45,231,483
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570
Downstream geneLOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077I02.bB6Ng01-077I02.g
ACCDH893459DH893460
length9641,203
definitionDH893459|Mus musculus domesticus DNA, BAC clone: B6Ng01-077I02, 5' end.DH893460|Mus musculus domesticus DNA, BAC clone: B6Ng01-077I02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggctatgtcctggacaccctcatgcagtggctgccacagtctg
cctcctatatactgagacattctggtgcttattaaactcagtatcctgat
tccaggacaacacaggttggggttccttagtaagtgatcaaggacttcaa
gacctccctcatgggcctggaaggaaacccttctaaaaagttccgaggaa
gtctgtgccacaggatctcgcccacctcaaccctgttaccactttttaaa
aaatatatatatcttcagaacacagattctcagttgtaggttcttatttc
tacacagctacccagagcaaaaaaatcagtatttgctgggaggagactca
atatcaggatagctatatataatcctcacgggatttcaatgtgtcatcaa
ggtgaacatatagacaaagagcagtgctgactgaggtggggctccctgca
catggagacagcatcaccttgcaacaggccccactgtagtcgccagattc
caaggatgcatagacccatgggggtcacaagtacatacacacacacagac
acaaacacacacagacacacacacaggcacacacacacaattggtcctct
atgaggagtccatgtctgtaggcttttgctacactgcatccttggtgtat
ttctttaagttccatggatgtctgatagcaaaaatcaagaaaagaatata
cccctggacatatttcaagttctgagacatttactactttcatcttagac
acaggcaatcacagcttggaggtgctaagcactagggaatccaggaccta
cttgcatcacatcagatactagctgacattgccctccaagcacagcatgg
ctggctagcttatgccatccagagccagtaggactgcagtatgtgctgag
gtacctgactagccacaggggttggggaacaatatcctatcttgagaaca
gctgccctgattta
gaattctctgccctgccttaaccacttgttgacattccttgtcctttaag
cacgatcttatcagcttccacaacggcatggttcctgctttaagtttgcc
attctccagttccctaactaaatatcccttgagtttctcccaagagggga
tagttaaggaccctgaacacgcaaaccacggtgctatgtgatctacctct
tttacaaagccttctagtgtcttggtggcgactttcaagccacgctgctt
caggaccgaccataaggcggtcaccacagagtgggagattcccatactgg
tcgctgtccaggcctgactgtgactgagaaccagtcagcaatactggtcg
ctgtccaggcctgaccgcgactgagaaccagtcagcagttccagaggtgg
aagcaaaacaaaatcgaaagggaaggaataatcgcagtgaaaacaatcaa
aagggtgtctaactctggagaaatttcaagactgtactaccttgtagagc
tgtaaagtgtcccgtagttctgaacccgccccgtgaaacgggggtctcct
aacagtgcctggtgatgataaattctcgagtttctcggtgccacttcttg
cccgagttagtatctcgccggcaagaattcactcggacaaccagatccta
tggcaaagcttttattgcttcaacataaggaagaccccaaacctggaaaa
tggtgctcttatatagcccgcagcgtgacgtttcagcacctgatgtggcg
tgacagcacctgattagttgctcgcccatcaccccattactacgccccga
gatgggcagtgactgggcgtgaattcactctttgcacttgcgcataaggc
ttgtttactagttaggcgtagtggaagccagtgccatctttataatggcg
attgctcatctccacaggctccagcatagtctcacagagacagctatatc
tgggtcctttagcaaatcttgctagtgtatgcaatgttgtcagcatttgg
agtctgattattggatggatccccgaatatgcattcacctagatgtcaat
cctttcgtcaaagaatccaaactttgttctctgtaactcctttcatgggt
ttttttgtttcatcttaaggagggtccaagtgtcacactttgctcatctt
ttggattttcaacgttagacaatgtatcttaaattctagtgggatactct
cag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45230521_45231483
seq2: B6Ng01-077I02.b_44_1007

seq1  GAATTCAGGCTATGTCCTGGACACCCTCATGCAGTGGCTGCCACAGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCTATGTCCTGGACACCCTCATGCAGTGGCTGCCACAGTCTG  50

seq1  CCTCCTATATACTGAGACATTCTGGTGCTTATTAAACTCAGTATCCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTATATACTGAGACATTCTGGTGCTTATTAAACTCAGTATCCTGAT  100

seq1  TCCAGGACAACACAGGTTGGGGTTCCTTAGTAAGTGATCAAGGACTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAACACAGGTTGGGGTTCCTTAGTAAGTGATCAAGGACTTCAA  150

seq1  GACCTCCCTCATGGGCCTGGAAGGAAACCCTTCTAAAAAGTTCCGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCCTCATGGGCCTGGAAGGAAACCCTTCTAAAAAGTTCCGAGGAA  200

seq1  GTCTGTGCCACAGGATCTCGCCCACCTCAACCCTGTTACCACTTTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGCCACAGGATCTCGCCCACCTCAACCCTGTTACCACTTTTTAAA  250

seq1  AAATATATATATCTTCAGAACACAGATTCTCAGTTGTAGGTTCTTATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATATATCTTCAGAACACAGATTCTCAGTTGTAGGTTCTTATTTC  300

seq1  TACACAGCTACCCAGAGCAAAAAAATCAGTATTTGCTGGGAGGAGACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGCTACCCAGAGCAAAAAAATCAGTATTTGCTGGGAGGAGACTCA  350

seq1  ATATCAGGATAGCTATATATAATCCTCACGGGATTTCAATGTGTCATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGGATAGCTATATATAATCCTCACGGGATTTCAATGTGTCATCAA  400

seq1  GGTGAACATATAGACAAAGAGCAGTGCTGACTGAGGTGGGGCTCCCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAACATATAGACAAAGAGCAGTGCTGACTGAGGTGGGGCTCCCTGCA  450

seq1  CATGGAGACAGCATCACCTTGCAACAGGCCCCACTGTAGTCGCCAGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGACAGCATCACCTTGCAACAGGCCCCACTGTAGTCGCCAGATTC  500

seq1  CAAGGATGCATAGACCCATGGGGGTCACAAGTACATACACACACACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGCATAGACCCATGGGGGTCACAAGTACATACACACACACAGAC  550

seq1  ACAAACACACACAGACACACACACAGGCACACACACACAATTGGTCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACACACAGACACACACACAGGCACACACACACAATTGGTCCTCT  600

seq1  ATGAGGAGTCCATGTCTGTAGGCTTTTGCTACACTGCATCCTTGGTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAGTCCATGTCTGTAGGCTTTTGCTACACTGCATCCTTGGTGTAT  650

seq1  TTCTTTAAGTTCCATGGATGTCTGATAGCAAAAATCAAGAAAAGAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAGTTCCATGGATGTCTGATAGCAAAAATCAAGAAAAGAATATA  700

seq1  CCCCTGGACATATTTCAAGTTCTGAGACATTTACTACTTTCATCTTAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGACATATTTCAAGTTCTGAGACATTTACTACTTTCATCTTAGAC  750

seq1  ACAGGCAATCACAGCTTGGAGGTGCTAAGCACTAGGGAATCCAGGACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAATCACAGCTTGGAGGTGCTAAGCACTAGGGAATCCAGGACCTA  800

seq1  CTTGCATCACATCAGATACTAGCTGACATTGCCCTCCAAGCACAGCATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATCACATCAGATACTAGCTGACATTGCCCTCCAAGCACAGCATGG  850

seq1  CTGGCTAGCTTATGCCATCCAGAGCCAGTAGGACTGCAGTATGTGCTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTAGCTTATGCCATCCAGAGCCAGTAGGACTGCAGTATGTGCTGAG  900

seq1  GTACCTGACTAGCCACAGGGGTT-GGGAACAATATCCTATCTTGAGAACA  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTACCTGACTAGCCACAGGGGTTGGGGAACAATATCCTATCTTGAGAACA  950

seq1  GCTGCCCTGATTTA  963
      ||||||||||||||
seq2  GCTGCCCTGATTTA  964