BAC Information

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BAC

Clone NameB6Ng01-077K18
Chromosome2 (Build37)14 (Build37)
Map Location 142,776,556 - 142,777,69893,460,520 - 93,461,637
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077K18.bB6Ng01-077K18.g
ACCDH893584DH893585
length9531,103
definitionDH893584|Mus musculus domesticus DNA, BAC clone: B6Ng01-077K18, 5' end.DH893585|Mus musculus domesticus DNA, BAC clone: B6Ng01-077K18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,556 - 142,777,698)(93,460,520 - 93,461,637)
sequence
gaattctttgttcagttctgatccccatttttttaagggggttatttgat
tttctgaagtccaccttcttgagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttc
atgaggtctcatttgtcaattctcaatcttacagcacaagccattgctgt
tctgttcaggaatttttctcctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataggaatggatcaattcg
cattcctctacatgataacaaccacttgtgccagcaccatttgttgaaaa
tgctgtctttcttccactcgatggttttagcttccttgttgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtcactataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctagggtttttctgcaatccttt
ttaatgttaaaagaaaatatgagcttgctgtttcttcataattaaggggt
ttcattcataggatgctgatttataggataatccaaggaaacctagatta
aatgactggattggtatgtaaataaaagactgggttatgatctccagaga
attttttttagaatagctgagaaaactgcttgaaaactgtctaaaggaaa
acgtagtaagctgtcataacctgtccttgaatactttgttttcaatgctc
cca
gaattcaactcccctgaaagtaaacgatatgcatgtttgtggtgaaagtt
ctcattaatgatctcacaacataagctgccaagaatctgccagtgtttca
agttacggttatttggagttgtttttctgccaatatgaaaattggttttg
tgatattgtttattgctgcatctttgcaactttttttttaaccctccacc
gaggaatacttctgttctgcaaaagcaacggaagctaaaaagatagaatg
ttttcatgtcagaaaaattaaagtcataaaggagatagatttccagaatt
aaattagaattgaacaagtcagttatgtgtgcatccatcagcccagtggt
caggatctcatttccactgaagcaacttagctggagggcagagagaattt
cttacacagagaaacccctacacacacctatcactataaattattctgag
gagacagaacactcacatgccattgagtataatagcttgaaaagggtact
catctacttgagagagctgttgagttttcaatgtaacctaaataggtata
aaacaaaatattaaaatctatcacaatacatagaaatgttttcttccagc
acagaacttttgggttgtatctactcttcaccacaatacaaataatgaac
acgctcaccttagctattcattgtcaaaaatgtgtaaattagtgctcatg
agtgatagtgggataggcaatgcctttgaatcacatgtcagcctgcaaat
gcattcgatgtaaggacaaatgttataatttttttccctaggctaaagga
agtaggaaagaaatagaagtcggcaaggagtcaaatggagccatcacatg
ttggctgtgtggtataagtatatatatatatctatattatagataatagg
agttcactggaatatattgtttgtgagggtccagaccatttgaatcctat
agagattaaaatcacccacagaattcagtcattccacatgtcttttcatt
acatttttgaagtcttttgtcaattcttatcgaacttgaagctttgaagg
gcagaaatttcttcgaagtaagccaaagttttatttataataaatgcttt
tga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776556_142777698
seq2: B6Ng01-077K18.b_47_730 (reverse)

seq1  AACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGA  50
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACCCTAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGA  50

seq1  ATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAAC  100

seq1  TGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTG  150
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGCATGGTACTGGTATAGTGACAGACAAGTAGACCAATGGAATAGAATTG  150

seq1  AAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAG  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCAACAAG  200

seq1  GGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTG  250
      | ||||||||||||| || ||||||||||||||||||||||||| |||||
seq2  GAAGCTAAAACCATCGAGTGGAAGAAAGACAGCATTTTCAACAAATGGTG  250

seq1  CTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATCCATACT  300
      ||||||||| |||||||||||||||||| ||||| |||| ||||||| | 
seq2  CTGGCACAAGTGGTTGTTATCATGTAGAGGAATGCGAATTGATCCATTCC  300

seq1  TATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATA  350

seq1  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGA  400

seq1  AGATATGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTG  450
      ||||||||||||||| || |||||||||||||||||||||||||||||||
seq2  AGATATGGGCACAGGAGAAAAATTCCTGAACAGAACAGCAATGGCTTGTG  450

seq1  CTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTC  500
      ||||||||| ||||||||||||||| ||||| |||||||| ||||| |||
seq2  CTGTAAGATTGAGAATTGACAAATGAGACCTCATGAAACTGCAAAGCTTC  500

seq1  TGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTG  550

seq1  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACA  600

seq1  TATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCCTT  650

seq1  -AAAAAATGGGGCTCACAAAACCATCCAGTGGAAGAAAGACAGCATTTTC  699
       ||||||||||| ||| ||            ||| |||||    |||   
seq2  AAAAAAATGGGGATCAGAA----------CTGAACAAAGA----ATTC--  684

seq1  AACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAAT  749
                                                        
seq2  --------------------------------------------------  684

seq1  CGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGG  799
                                                        
seq2  --------------------------------------------------  684

seq1  AACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGG  849
                                                        
seq2  --------------------------------------------------  684

seq1  AAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAAGAGC  899
                                                        
seq2  --------------------------------------------------  684

seq1  AATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAAC  949
                                                        
seq2  --------------------------------------------------  684

seq1  TCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGACAAAAAGACCA  999
                                                        
seq2  --------------------------------------------------  684

seq1  CCAACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACT  1049
                                                        
seq2  --------------------------------------------------  684

seq1  AATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAAATCAA  1099
                                                        
seq2  --------------------------------------------------  684

seq1  ATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  1143
                                                  
seq2  --------------------------------------------  684

seq1: chr14_93460520_93461637
seq2: B6Ng01-077K18.g_69_1171 (reverse)

seq1  TCAAAAGCATATTTATTTAATTAAATAAACCTTTGCCATAACTTTTCGAG  50
      ||||||||  |||||||    |||||||| ||||| | ||    ||||| 
seq2  TCAAAAGC--ATTTATT---ATAAATAAAACTTTGGCTTA---CTTCGAA  42

seq1  AGAATTTCTGCCCTTCAAAGCTCAAAGTTCGGATAAGAATATGACAAAAG  100
        ||||||||||||||||||||  |||||| ||||||||| |||||||||
seq2  GAAATTTCTGCCCTTCAAAGCTTCAAGTTC-GATAAGAAT-TGACAAAAG  90

seq1  ACTTCAAAAATGTAATGAAAGAACATGTTGGAATGACTGAATTCTGT-GG  149
      ||||||||||||||||||||  ||||| ||||||||||||||||||| ||
seq2  ACTTCAAAAATGTAATGAAAAGACATG-TGGAATGACTGAATTCTGTGGG  139

seq1  TGATTTTAATCTTCTATAGGATTCAAATGGTCTGGACCCTCACAAACAAT  199
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAATC-TCTATAGGATTCAAATGGTCTGGACCCTCACAAACAAT  188

seq1  ATATTTCCAGTTGAACCTCCTATTATCTATAATATAGATATATTATATAT  249
      ||| |||||| |||| |||||||||||||||||||||||||| |||||||
seq2  ATA-TTCCAG-TGAA-CTCCTATTATCTATAATATAGATATA-TATATAT  234

seq1  ACTTATACCACACAGCCAACATGTGATGGCTCCATTTGACTCCTTGCCGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATACCACACAGCCAACATGTGATGGCTCCATTTGACTCCTTGCCGA  284

seq1  CTTCTATTTCTTTCCTACTTCCTTTAGCCTAGGGAAAAAAATTATAACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTTCTTTCCTACTTCCTTTAGCCTAGGGAAAAAAATTATAACAT  334

seq1  TTGTCCTTACATCGAATGCATTTGCAGGCTGACATGTGATTCAAAGGCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTACATCGAATGCATTTGCAGGCTGACATGTGATTCAAAGGCAT  384

seq1  TGCCTATCCCACTATCACTCATGAGCACTAATTTACACATTTTTGACAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATCCCACTATCACTCATGAGCACTAATTTACACATTTTTGACAAT  434

seq1  GAATAGCTAAGGTGAGCGTGTTCATTATTTGTATTGTGGTGAAGAGTAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTAAGGTGAGCGTGTTCATTATTTGTATTGTGGTGAAGAGTAGA  484

seq1  TACAACCCAAAAGTTCTGTGCTGGAAGAAAACATTTCTATGTATTGTGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCAAAAGTTCTGTGCTGGAAGAAAACATTTCTATGTATTGTGAT  534

seq1  AGATTTTAATATTTTGTTTTATACCTATTTAGGTTACATTGAAAACTCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTAATATTTTGTTTTATACCTATTTAGGTTACATTGAAAACTCAA  584

seq1  CAGCTCTCTCAAGTAGATGAGTACCCTTTTCAAGCTATTATACTCAATGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTCTCAAGTAGATGAGTACCCTTTTCAAGCTATTATACTCAATGG  634

seq1  CATGTGAGTGTTCTGTCTCCTCAGAATAATTTATAGTGATAGGTGTGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAGTGTTCTGTCTCCTCAGAATAATTTATAGTGATAGGTGTGTGT  684

seq1  AGGGGTTTCTCTGTGTAAGAAATTCTCTCTGCCCTCCAGCTAAGTTGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTCTCTGTGTAAGAAATTCTCTCTGCCCTCCAGCTAAGTTGCTT  734

seq1  CAGTGGAAATGAGATCCTGACCACTGGGCTGATGGATGCACACATAACTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAATGAGATCCTGACCACTGGGCTGATGGATGCACACATAACTG  784

seq1  ACTTGTTCAATTCTAATTTAATTCTGGAAATCTATCTCCTTTATGACTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTCAATTCTAATTTAATTCTGGAAATCTATCTCCTTTATGACTTT  834

seq1  AATTTTTCTGACATGAAAACATTCTATCTTTTTAGCTTCCGTTGCTTTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTGACATGAAAACATTCTATCTTTTTAGCTTCCGTTGCTTTTG  884

seq1  CAGAACAGAAGTATTCCTCGGTGGAGGGTTAAAAAAAAAGTTGCAAAGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGAAGTATTCCTCGGTGGAGGGTTAAAAAAAAAGTTGCAAAGAT  934

seq1  GCAGCAATAAACAATATCACAAAACCAATTTTCATATTGGCAGAAAAACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAATAAACAATATCACAAAACCAATTTTCATATTGGCAGAAAAACA  984

seq1  ACTCCAAATAACCGTAACTTGAAACACTGGCAGATTCTTGGCAGCTTATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAATAACCGTAACTTGAAACACTGGCAGATTCTTGGCAGCTTATG  1034

seq1  TTGTGAGATCATTAATGAGAACTTTCACCACAAACATGCATATCGTTTAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGATCATTAATGAGAACTTTCACCACAAACATGCATATCGTTTAC  1084

seq1  TTTCAGGGGAGTTGAATTC  1118
      |||||||||||||||||||
seq2  TTTCAGGGGAGTTGAATTC  1103