BAC Information

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BAC

Clone NameB6Ng01-078F01
Chromosome14 (Build37)5 (Build37)
Map Location 101,901,378 - 101,901,47716,238,399 - 16,238,774
singlet/doubletsingletsinglet
Overlap geneTbc1d4
Upstream geneEG668683, EG668684, 1700110M21Rik, LOC100043421, LOC382936
Downstream geneCommd6, Uchl3, Lmo7, LOC100043795, LOC545567, LOC669278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078F01.bB6Ng01-078F01.g
ACCDH894045DH894046
length920371
definitionDH894045|Mus musculus domesticus DNA, BAC clone: B6Ng01-078F01, 5' end.DH894046|Mus musculus domesticus DNA, BAC clone: B6Ng01-078F01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(101,901,378 - 101,901,477)(16,238,399 - 16,238,774)
sequence
gaattcttcactaaacccatctggtcctgggctttgggcttttttctttt
tctttttctttttttttttttttttttttttttttggttgggagactatt
agggcctgtttctatttctttaggggtttgagactgtttagatggtttat
ctgatcctgataaactttggcacctgttatctgtctggaaaattctccat
ttcatccagattattcagttctgtttcgtataggcttttgtagtaggatc
tgatgatttttttggatttcctcattttctgttgttatatctcccttttc
atttctgattttgttaatttgggtactgtctctgtgctgtctagttagac
tggctaaaggtttatctatcttgctgattttctcaaagaaccagcttctg
gttttgttgattctttaaatagttcactttctttctactttgttgatttc
agccctgagtttgattatttcctgctgtctactcctcttgggtgaatttg
cttttgttgttgttgttctagagttctcaggtgtactgttgaactcctag
tgtttgctctctccagtttctttttggaggcagtcagagttgagttttcc
tcttagcactgctttcattgtatcacttaagtttgggtatgttgtatctt
catttgcattaaattctaaaaatcttttaatttatttctttatttcctct
ttgaccaaatcttcactgagtagagtgttgttgttcagtgttgtggaccg
tccagcagcctgcaagaaacagggtacgactgaggaggcagactcgagct
gaaagagaaggaactagatgggtgagagaaagaatagagctaagtcagtc
gctttataaaaaagaggggaggcccattcccagtcattccaagttccttg
tgaagttgacagatcagcct
tctttaacagaaaccagaattttgaagaaatggctgattccagacctgca
gttggaaaaaagtacaaaatagccctggaatttcatgtcccagaaatgaa
ggaagctgctggatatttctgtaaggaaattaaaatctcaaacccaaaca
agagaattaacaaaaaccatgcccactgctcctaatacagaatagctaca
gtagcaaaatatgtattaactgttatgatgggagcctcgttacactgaca
ttcacagctagcacacttagcagtcatctttactttggaggatctgcagg
cacagaaactattagaaaccaggcataggcaaacttcttttgttttttcc
tctcctcctccccctcctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101901378_101901477
seq2: B6Ng01-078F01.b_417_516 (reverse)

seq1  GCAGGAAATAATCAAACTCAGGGCTGAAATCAACCAAGTAGAAACAAAAA  50
      |||||||||||||||||||||||||||||||||| ||||||||| |||  
seq2  GCAGGAAATAATCAAACTCAGGGCTGAAATCAACAAAGTAGAAAGAAAGT  50

seq1  GAACTATACAAAGAATCAACCAAACCAGGAGCTGGTTCTTTGAGAAAATC  100
      |||||||  ||||||||||| ||||||| |||||||||||||||||||||
seq2  GAACTATTTAAAGAATCAACAAAACCAGAAGCTGGTTCTTTGAGAAAATC  100

seq1: chr5_16238399_16238774
seq2: B6Ng01-078F01.g_66_441

seq1  GAATTCTCTTTAACAGAAACCAGAATTTTGAAGAAATGGCTGATTCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTAACAGAAACCAGAATTTTGAAGAAATGGCTGATTCCAGA  50

seq1  CCTGCAGTTGGAAAAAAGTACAAAATAGCCCTGGAATTTCATGTCCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGTTGGAAAAAAGTACAAAATAGCCCTGGAATTTCATGTCCCAGA  100

seq1  AATGAAGGAAGCTGCTGGATATTTCTGTAAGGAAATTAAAATCTCAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGAAGCTGCTGGATATTTCTGTAAGGAAATTAAAATCTCAAACC  150

seq1  CAAACAAGAGAATTAACAAAAACCATGCCCACTGCTCCTAATACAGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAGAGAATTAACAAAAACCATGCCCACTGCTCCTAATACAGAATA  200

seq1  GCTACAGTAGCAAAATATGTATTAACTGTTATGATGGGAGCCTCGTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTAGCAAAATATGTATTAACTGTTATGATGGGAGCCTCGTTACA  250

seq1  CTGACATTCACAGCTAGCACACTTAGCAGTCATCTTTACTTTGGAGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTCACAGCTAGCACACTTAGCAGTCATCTTTACTTTGGAGGATC  300

seq1  TGCAGGCACAGAAACTATTAGAAACCAGGCATAGGCAAACTTCTTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCACAGAAACTATTAGAAACCAGGCATAGGCAAACTTCTTTTGTT  350

seq1  TTTTCCTCTCCTCCTCCCCCTCCTCC  376
      ||||||||||||||||||||||||||
seq2  TTTTCCTCTCCTCCTCCCCCTCCTCC  376