BAC Information

Click to search

BAC

Clone NameB6Ng01-079B22
Chromosome14 (Build37)
Map Location 14,562,924 - 14,564,080
singlet/doubletsinglet
Overlap genenone
Upstream geneCadps, EG432822, LOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik
Downstream geneEG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079B22.bB6Ng01-079B22.g
ACCDH894623DH894624
length1,150929
definitionDH894623|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B22, 5' end.DH894624|Mus musculus domesticus DNA, BAC clone: B6Ng01-079B22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcatatcacactcctgtctctcctttgcttctctgattcttc
ttggctattgaattcacttcactacattcattttcttttacagaagaagc
ttacaatttttgtcaaattttgaatattttgtctgaggaggtctagctag
taacagtgcgcccccaagatggggaaagccttttgaattctctgggtcta
gtttctatatttgtttatgcatatctttggccaaactggagtaaacaggg
taggaagttcaatggggttcaaggtactctctctcagtttgacatcatta
atgaaaggaaataaaactgtaattcatgtaatgtatgttaaatagcccaa
agagttgtttgtgagctttgaaacctggggctgagaacatagcagaacag
accaggacatgcccgggcaggcccattgcctccctagctcccacccctct
gacctaagttaaatgttacaggctgctgatgtttaaatggaccaatcatg
tgaaaccgcgccaattcctcccccagccccactccttttctataaaaacc
cctagcttccaagcctcgtggtcgaatccactgtctcctgttgtgtgaga
tacgtttcgacccggagctccgccattaaaaaacctcttgttgttacatc
aaggtgttgtgttctattcgtgattcttgggtgcacgccgaatcgggagc
tgagtgggggtttccccactgagttctttcattaacaagtttcattagtg
tctttttttataccatctatgaatatttattaatacttgttactatcaaa
tacatatttgaatatgtaattatgaaactctccacataaatctgtatttt
attgtgttcccctatggattgttctgggagtagcatattacccaagagag
accttatttaaaagtgagaaatgagtataggaaatgatatattaaggtaa
tgatggtaaggacttggagtgctttatgagggggaatgggttgggtaaac
agctgtttgtcactgtcctaggtacaatcagacatggaggaggattttgc
actttgagagttgtcagtttctactggctacctcacaggaggaatatagc
cctctttaggcagccagaatctctttgtcttgtatatccactgactgtgt

gaattcctgatctttccaagtcttttatcatgaatggaggttggtctttg
tccaatgctttctcagcatctaatgagaggataatgtggattttgtcttt
gggtttgtttatatagtggattacttgattgatttctgtatattaaacca
tccccacatccctgggatgcagccttgatcatgatgtttgattgttttga
tgtgttcttggattcagttggccagaattttattgagtatttttgcatca
atattcataagggaaattggtctgaatttctctttctctgttgggttttt
gtgtggtttaggtatcagagtaattgtggcttcatagaatgaattgggta
gaataccatctgtttctattttgtggaacagttagaggagtattggagtg
aggtcctctttgaagatctgatataactctgcactaaacccatcaggtcc
tgggattttttggtttgggcgactgtttctattcctttagagaatatggg
aatatttagatcattaatctgatcccagttaaactttggaacctggtatc
tgtctagaaaattgtcatttcatctaggttttctagtttgtgttgagtat
agctttttgtagtaggctctgatgattttttggatttcctcagtttctat
tgttatgtttctcttttcatttctgattttgttaattaggatactgcccg
tgtgccggctagtaagtctggctaaaggtttatctatctatcttgttgat
tttctcaaagaccagctcctggtttgggttgattttttttttctttgtat
agttcttttgtttctatttgtttgatttaaccctgagtttgattatttcc
tgccctctctactcctctggtatgaattagcttccttgtgttccaaagct
tttaggtgtgctgtcaagcttctcctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14562924_14564080
seq2: B6Ng01-079B22.b_45_1194

seq1  GAATTCTTTCATATCACACTCCTGTCTCTCCTTTGCTTCTCTGATTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATATCACACTCCTGTCTCTCCTTTGCTTCTCTGATTCTTC  50

seq1  TTGGCTATTGAATTCACTTCACTACATTCATTTTCTTTTACAGAAGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTATTGAATTCACTTCACTACATTCATTTTCTTTTACAGAAGAAGC  100

seq1  TTACAATTTTTGTCAAATTTTGAATATTTTGTCTGAGGAGGTCTAGCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATTTTTGTCAAATTTTGAATATTTTGTCTGAGGAGGTCTAGCTAG  150

seq1  TAACAGTGCGCCCCCAAGATGGGGAAAGCCTTTTGAATTCTCTGGGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGCGCCCCCAAGATGGGGAAAGCCTTTTGAATTCTCTGGGTCTA  200

seq1  GTTTCTATATTTGTTTATGCATATCTTTGGCCAAACTGGAGTAAACAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATATTTGTTTATGCATATCTTTGGCCAAACTGGAGTAAACAGGG  250

seq1  TAGGAAGTTCAATGGGGTTCAAGGTACTCTCTCTCAGTTTGACATCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGTTCAATGGGGTTCAAGGTACTCTCTCTCAGTTTGACATCATTA  300

seq1  ATGAAAGGAAATAAAACTGTAATTCATGTAATGTATGTTAAATAGCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGAAATAAAACTGTAATTCATGTAATGTATGTTAAATAGCCCAA  350

seq1  AGAGTTGTTTGTGAGCTTTGAAACCTGGGGCTGAGAACATAGCAGAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGTTTGTGAGCTTTGAAACCTGGGGCTGAGAACATAGCAGAACAG  400

seq1  ACCAGGACATGCCCGGGCAGGCCCATTGCCTCCCTAGCTCCCACCCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGACATGCCCGGGCAGGCCCATTGCCTCCCTAGCTCCCACCCCTCT  450

seq1  GACCTAAGTTAAATGTTACAGGCTGCTGATGTTTAAATGGACCAATCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAGTTAAATGTTACAGGCTGCTGATGTTTAAATGGACCAATCATG  500

seq1  TGAAACCGCGCCAATTCCTCCCCCAGCCCCACTCCTTTTCTATAAAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCGCGCCAATTCCTCCCCCAGCCCCACTCCTTTTCTATAAAAACC  550

seq1  CCTAGCTTCCAAGCCTCGTGGTCGAATCCACTGTCTCCTGTTGTGTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTTCCAAGCCTCGTGGTCGAATCCACTGTCTCCTGTTGTGTGAGA  600

seq1  TACGTTTCGACCCGGAGCTCCGCCATTAAAAAACCTCTTGTTGTTACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTTTCGACCCGGAGCTCCGCCATTAAAAAACCTCTTGTTGTTACATC  650

seq1  AAGGTGTTGTGTTCTATTCGTGATTCTTGGGTGCACGCCGAATCGGGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTGTGTTCTATTCGTGATTCTTGGGTGCACGCCGAATCGGGAGC  700

seq1  TGAGTGGGGGTTTCCCCACTGAGTTCTTTCATTAACAAGTTTCATTAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGGGGTTTCCCCACTGAGTTCTTTCATTAACAAGTTTCATTAGTG  750

seq1  TCTTTTTTTATACCATCTATGAATATTTATTAATACTTGTTACTATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTATACCATCTATGAATATTTATTAATACTTGTTACTATCAAA  800

seq1  TACATATTTGAATATGTAATTATGAAACTCTCCACATAAATCTGTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTGAATATGTAATTATGAAACTCTCCACATAAATCTGTATTTT  850

seq1  ATTGTGTTCCCCTATGGATTGTTCTGGGAGTAGCATATTACCCAAGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTCCCCTATGGATTGTTCTGGGAGTAGCATATTACCCAAGAGAG  900

seq1  ACCTTATTTAAAAGTGAGAAATGAGTATAGGAAATGATATATTAAGGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTTAAAAGTGAGAAATGAGTATAGGAAATGATATATTAAGGTAA  950

seq1  TGATGGTAAGGACTTGGAGTGCTTTATGAGGGGGAATGGTTTGGGTAAAA  1000
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  TGATGGTAAGGACTTGGAGTGCTTTATGAGGGGGAATGGGTTGGGT-AAA  999

seq1  CAGCTGTTTGTCAACTGT-CTAGGTACAATCAGACATGGAGGAGGAATTT  1049
      |||||||||||| ||||| |||||||||||||||||||||||||| ||||
seq2  CAGCTGTTTGTC-ACTGTCCTAGGTACAATCAGACATGGAGGAGG-ATTT  1047

seq1  TGCACTTTGAGAGTGTCCAGTTTTCTACTGGCTACCTCACAGAGGGAATA  1099
      ||||||||||||||   ||| |||||||||||||||||||||  ||||||
seq2  TGCACTTTGAGAGTTGTCAG-TTTCTACTGGCTACCTCACAGGAGGAATA  1096

seq1  TAGGCCCTC-TTAGGCAGCCAG-ATCTCTTTGTTCTTTGTAATTATTCAC  1147
      || |||||| |||||||||||| ||||||||||   |||||  ||| |||
seq2  TA-GCCCTCTTTAGGCAGCCAGAATCTCTTTGT--CTTGTA--TATCCAC  1141

seq1  TGACTTGTGT  1157
      |||| |||||
seq2  TGAC-TGTGT  1150