BAC Information

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BAC

Clone NameB6Ng01-079K21
Chromosome14 (Build37)
Map Location 44,066,828 - 44,067,944
singlet/doubletsinglet
Overlap geneLOC673380
Upstream geneLOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik
Downstream geneLOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079K21.bB6Ng01-079K21.g
ACCDH895019DH895020
length1,2221,110
definitionDH895019|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K21, 5' end.DH895020|Mus musculus domesticus DNA, BAC clone: B6Ng01-079K21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgactcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataaccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcgcccctgagttgattatt
tcctgccgtctactcctcttgggtgaatttgcttcctttttttctagagc
ttttagatgtgtgtcaagctgctagtatgtgctctctcccgtttctcttg
gaggtactcagagctatgagttccctttttgaaatgctttcatgtgtcca
tagtttgggtatgtgtggcttcatttcataactctaaagtctttaatttc
tttcttattcctccttgacagtttcattgggaagagagggttggtcagtt
cattgagttggccttcattatgtggttgtatggaatcagctaagcaaggg
gtctgaggatacatgacattcaaattaggtactcgtgaaggcaggtttgt
gtgccaatactatgagtccgaa
gaattcatagaagataatgattcctacaggtgagtcccagacacagctga
gacccagcactaggcagggaatgcttgtggccttctaggactttgtacaa
aagtgagagctctagttctatactctctgtttcttaataggagccctccc
ttgaggcatgggtcttggatttgtacctcttagactcaggtttcctaagt
gtgaatattgtccaagaccctccagtctttattcttccaaattcaggatc
ttctgcatagaaaccatttccaccatgctgggaatctcaagcaaccctga
acttctagggttctgacagcagattacaagatctgggatccatgacaaaa
atggaaagagtttataccttttgggtcttctctcctccctaagagggcat
tgccctctccatactgatggttttctggtactacacacatatgagcaacc
atgaggaagttttcctcttctgtgatgtatatggaacactcttggtgtca
gggttttcagaaatattttgagtcttgttgcatgtggctggtctctggat
ttgacctgcctctatttggtacttatggatatacagtggtctctagtctc
gggctgtctggggatcagagaccttgcaggcatcataatatttggaagag
tggcaggcaaatcaaagctagctgggaatcaacatttatgttttgtatgt
ttgtggttcagcatcaggcacacccacctcctgaaagaatgcaatcaatt
gaagaaaaaagtaaggatgttgctgaatgagaacagaaaactgctggtag
agcaggctgaccaggaggcatcctttggtgaagaaaagagttctgtgatg
agaccagcaagaacatacatcccaagtgcaaagcagcagcagtaggatga
tgtgtatcagaggcagattgccctcatggctaaccataaacatagacaat
caaatgtaacagtccaccaacttatccaggcactcacttctgtctcttca
agtgtttattttagtgatcatttacaagctttctctggaggtagactttt
acaagaaactgcatgttagcaagcaatttttctgcctgctaaatctggca
gtcactaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44066828_44067944
seq2: B6Ng01-079K21.g_70_1179

seq1  GAATTCATAGAAGATAATGATTCCTACAGGTGAGTCCCAGACACAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGAAGATAATGATTCCTACAGGTGAGTCCCAGACACAGCTGA  50

seq1  GACCCAGCACTAGGCAGGGAATGCTTGTGGCCTTCTAGGACTTTGTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCACTAGGCAGGGAATGCTTGTGGCCTTCTAGGACTTTGTACAA  100

seq1  AAGTGAGAGCTCTAGTTCTATACTCTCTGTTTCTTAATAGGAGCCCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGAGCTCTAGTTCTATACTCTCTGTTTCTTAATAGGAGCCCTCCC  150

seq1  TTGAGGCATGGGTCTTGGATTTGTACCTCTTAGACTCAGGTTTCCTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCATGGGTCTTGGATTTGTACCTCTTAGACTCAGGTTTCCTAAGT  200

seq1  GTGAATATTGTCCAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATTGTCCAAGACCCTCCAGTCTTTATTCTTCCAAATTCAGGATC  250

seq1  TTCTGCATAGAAACCATTTCCACCATGCTGGGAATCTCAAGCAACCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATAGAAACCATTTCCACCATGCTGGGAATCTCAAGCAACCCTGA  300

seq1  ACTTCTAGGGTTCTGACAGCAGATTACAAGATCTGGGATCCATGACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAGGGTTCTGACAGCAGATTACAAGATCTGGGATCCATGACAAAA  350

seq1  ATGGAAAGAGTTTATACCTTTTGGGTCTTCTCTCCTCCCTAAGAGGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGAGTTTATACCTTTTGGGTCTTCTCTCCTCCCTAAGAGGGCAT  400

seq1  TGCCCTCTCCATACTGATGGTTTTCTGGTACTACACACATATGAGCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTCCATACTGATGGTTTTCTGGTACTACACACATATGAGCAACC  450

seq1  ATGAGGAAGTTTTCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAAGTTTTCCTCTTCTGTGATGTATATGGAACACTCTTGGTGTCA  500

seq1  GGGTTTTCAGAAATATTTTGAGTCTTGTTGCATGTGGCTGGTCTCTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTCAGAAATATTTTGAGTCTTGTTGCATGTGGCTGGTCTCTGGAT  550

seq1  TTGACCTGCCTCTATTTGGTACTTATGGATATACAGTGGTCTCTAGTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTGCCTCTATTTGGTACTTATGGATATACAGTGGTCTCTAGTCTC  600

seq1  GGGCTGTCTGGGGATCAGAGACCTTGCAGGCATCATAATATTTGGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTCTGGGGATCAGAGACCTTGCAGGCATCATAATATTTGGAAGAG  650

seq1  TGGCAGGCAAATCAAAGCTAGCTGGGAATCAACATTTATGTTTTGTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCAAATCAAAGCTAGCTGGGAATCAACATTTATGTTTTGTATGT  700

seq1  TTGTGGTTCAGCATCAGGCACACCCACCTCCTGAAAGAATGCAATCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTCAGCATCAGGCACACCCACCTCCTGAAAGAATGCAATCAATT  750

seq1  GAAGAAAAAAGTAAGGATGTTGCTGAATGAGAACAGAAAACTGCTGGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAAAGTAAGGATGTTGCTGAATGAGAACAGAAAACTGCTGGTAG  800

seq1  AGCAGGCTGACCAGGAGGCATCCTTTGGTGAAGAAAAGAGTTCTGTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTGACCAGGAGGCATCCTTTGGTGAAGAAAAGAGTTCTGTGATG  850

seq1  AGACCAGCAAGAACATACATCCCAAGTGCAAAGCAGCAGCAGGTAGGATG  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGACCAGCAAGAACATACATCCCAAGTGCAAAGCAGCAGCA-GTAGGATG  899

seq1  ATGTGTATCAGAGGCAGATTGCCCTCATGGCTAACCATAAACATAGACAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATCAGAGGCAGATTGCCCTCATGGCTAACCATAAACATAGACAA  949

seq1  TCAAATGTAACAGTCCACCAACTTATCCAGGCACTCACTTCTGTCTCCTC  1000
      |||||||||||||||||||||||||||||||||||||||||||||| || 
seq2  TCAAATGTAACAGTCCACCAACTTATCCAGGCACTCACTTCTGTCT-CTT  998

seq1  CAAGTGTTTATTTAGGTGATCATCTACAAGGCTTTCTCTGGAGGTAGACT  1050
      |||||||||||||  |||||||| ||||| ||||||||||||||||||||
seq2  CAAGTGTTTATTTTAGTGATCATTTACAA-GCTTTCTCTGGAGGTAGACT  1047

seq1  TTTACAAGAAACTGCATGTTTAGCAAGCCAATTTTTCTGCCCTGCTAAAA  1100
      |||||||||||||||||| |||||||| ||||||||||| |||||| |||
seq2  TTTACAAGAAACTGCATG-TTAGCAAG-CAATTTTTCTG-CCTGCT-AAA  1093

seq1  TCT-GCAGTTCACTAGGG  1117
      ||| |||| |||||||||
seq2  TCTGGCAG-TCACTAGGG  1110