MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-079L16
Chromosome	14 (Build37)
Map Location	79,357,199 - 79,358,368
singlet/doublet	singlet
Overlap gene	1300010F03Rik
Upstream gene	Epsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649
Downstream gene	LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734
Link	Open Mouse BAC browser

Click to get alignment info.

name	Epsti1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108670 MGI:1915168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	AU021034 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219170 MGI:2145738
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfsf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21943 MGI:1100089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC219180 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:219180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Akap11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219181 MGI:2684060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 149 ESTs, 3 Proteins

name	Dgkh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380921 MGI:2444188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC673649 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673649
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	1300010F03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219189 MGI:1919008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 75 ESTs, 2 Proteins

name	LOC629709 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043765 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	AU017455 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105590 MGI:2145729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190002H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66214 MGI:1913464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Narg1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66897 MGI:1914147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtrf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211253 MGI:2384815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kbtbd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211255 MGI:2685141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432879 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432879 MGI:3643058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22380 MGI:109568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13709 MGI:107180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668560 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Sugt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67955 MGI:1915205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lect1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16840 MGI:1341171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcdh8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18530 MGI:1306800
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG629734 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629734 MGI:3647443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epsti1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30519880 GeneID:108670 MGI:1915168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial stromal interaction 1 (breast) transcript_id : NM_029495.1

name	Epsti1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363869 GeneID:108670 MGI:1915168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial stromal interaction 1 (breast) transcript_id : NM_178825.2

name	AU021034 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802982 GeneID:219170 MGI:2145738
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU021034 transcript_id : NM_177629.3

name	Tnfsf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114842414 GeneID:21943 MGI:1100089
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor (ligand) superfamily, member 11 transcript_id : NM_011613.3

name	Akap11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265811 GeneID:219181 MGI:2684060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 149 ESTs, 3 Proteins product : A kinase (PRKA) anchor protein 11 transcript_id : XM_001002157.2

name	Dgkh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486740 GeneID:380921 MGI:2444188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, eta transcript_id : NM_001081336.1

name	1300010F03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265813 GeneID:219189 MGI:1919008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 75 ESTs, 2 Proteins product : RIKEN cDNA 1300010F03 gene transcript_id : XM_001002205.2

name	LOC100043765 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265816 GeneID:100043765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100043765 transcript_id : XM_001480920.1

name	AU017455 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380837 GeneID:105590 MGI:2145729
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU017455 transcript_id : NM_001033215.2

name	1190002H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:127138619 GeneID:66214 MGI:1913464
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190002H23 gene transcript_id : NM_025427.2

name	Narg1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328273 GeneID:66897 MGI:1914147
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NMDA receptor regulated 1-like transcript_id : NM_025832.2

name	Mtrf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357946 GeneID:211253 MGI:2384815
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial translational release factor 1 transcript_id : NM_145960.3

name	Kbtbd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67625734 GeneID:211255 MGI:2685141
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch repeat and BTB (POZ) domain containing 7 transcript_id : NM_001024135.1

name	EG432879 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802323 GeneID:432879 MGI:3643058
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG432879 transcript_id : NM_001034882.2

name	Wbp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286863 GeneID:22380 MGI:109568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WW domain binding protein 4 transcript_id : NM_018765.3

name	Elf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131095 GeneID:13709 MGI:107180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E74-like factor 1 transcript_id : NM_007920.3

name	Sugt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802194 GeneID:67955 MGI:1915205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) transcript_id : NM_026474.4

name	Lect1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754527 GeneID:16840 MGI:1341171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leukocyte cell derived chemotaxin 1 transcript_id : NM_010701.1

name	Pcdh8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181186 GeneID:18530 MGI:1306800
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protocadherin 8 transcript_id : NM_001042726.1

name	Pcdh8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181161 GeneID:18530 MGI:1306800
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protocadherin 8 transcript_id : NM_021543.2

name	EG629734 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364146 GeneID:629734 MGI:3647443
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG629734 transcript_id : NM_001037936.2

name	Epsti1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519881 GeneID:108670 MGI:1915168
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform a is encoded by transcript variant a product : epithelial stromal interaction 1 isoform a protein_id : NP_083771.1

name	Epsti1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281909 GeneID:108670 MGI:1915168
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform b is encoded by transcript variant b product : epithelial stromal interaction 1 isoform b protein_id : NP_849147.1

name	AU021034 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244020 CCDS:CCDS27293.1 GeneID:219170 MGI:2145738
definition	codon_start : 1 product : hypothetical protein LOC219170 protein_id : NP_808297.1

name	Tnfsf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114842415 CCDS:CCDS27294.1 GeneID:21943 MGI:1100089
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005164 - tumor necrosis factor receptor binding [Evidence IEA] GO_process : GO:0045453 - bone resorption [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0048535 - lymph node development [Evidence TAS]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0001503 - ossification [Evidence IMP]; GO:0030316 - osteoclast differentiation [Evidence IGI] [Evidence IDA]; GO:0045672 - positive regulation of osteoclast differentiation [Evidence IDA]; GO:0051260 - protein homooligomerization [Evidence IDA]; GO:0045670 - regulation of osteoclast differentiation [Evidence IDA] codon_start : 1 note : OPG ligand; osteoprotegerin ligand; osteoclast differentiation factor; receptor activator of NF-kappaB ligand; tumor necrosis factor-related activation-induced cytokine product : tumor necrosis factor (ligand) superfamily, member 11 protein_id : NP_035743.2

name	Akap11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265812 GeneID:219181 MGI:2684060
definition	codon_start : 1 product : similar to A-kinase anchoring protein 220 protein_id : XP_001002157.2

name	Dgkh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486741 GeneID:380921 MGI:2444188
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005768 - endosome [Evidence ISS] GO_function : GO:0004143 - diacylglycerol kinase activity [Evidence ISS] [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0046339 - diacylglycerol metabolism [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 product : diacylglycerol kinase, eta protein_id : NP_001074805.1

name	1300010F03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265814 GeneID:219189 MGI:1919008
definition	codon_start : 1 product : hypothetical protein LOC219189 protein_id : XP_001002205.2

name	LOC100043765 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265817 GeneID:100043765
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480970.1

name	AU017455 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701614 GeneID:105590 MGI:2145729
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC105590 protein_id : NP_001028387.1

name	1190002H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:127138620 GeneID:66214 MGI:1913464
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030295 - protein kinase activator activity [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence ISS] codon_start : 1 product : response gene to complement 32 protein_id : NP_079703.2

name	Narg1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313242 CCDS:CCDS27296.1 GeneID:66897 MGI:1914147
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : NMDA receptor regulated 1-like protein_id : NP_080108.1

name	Mtrf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981857 CCDS:CCDS27297.1 GeneID:211253 MGI:2384815
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003747 - translation release factor activity [Evidence IEA]; GO:0016149 - translation release factor activity, codon specific [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006415 - translational termination [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial translational release factor 1 protein_id : NP_666072.2

name	Kbtbd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67625735 CCDS:CCDS27298.1 GeneID:211255 MGI:2685141
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : kelch repeat and BTB (POZ) domain containing 7-like product : kelch repeat and BTB (POZ) domain containing 7-like protein protein_id : NP_001019306.1

name	EG432879 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702226 CCDS:CCDS27299.1 GeneID:432879 MGI:3643058
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC432879 protein_id : NP_001030054.1

name	Wbp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84871981 CCDS:CCDS27300.1 GeneID:22380 MGI:109568
definition	GO_component : GO:0005681 - spliceosome complex [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : formin binding protein 21 product : WW domain binding protein 4 protein_id : NP_061235.2

name	Elf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679627 CCDS:CCDS27301.1 GeneID:13709 MGI:107180
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0050860 - negative regulation of T cell receptor signaling pathway [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0001817 - regulation of cytokine production [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : E74-like factor 1 protein_id : NP_031946.1

name	Sugt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956176 GeneID:67955 MGI:1915205
definition	GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : SGT1, suppressor of G2 allele of SKP1 protein_id : NP_080750.1

name	Lect1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754528 CCDS:CCDS27302.1 GeneID:16840 MGI:1341171
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0051216 - cartilage development [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Chondromodulin 1 product : leukocyte cell derived chemotaxin 1 protein_id : NP_034831.1

name	Pcdh8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181187 GeneID:18530 MGI:1306800
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0007156 - homophilic cell adhesion [Evidence IEA]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : protocadherin 8 isoform 2 protein_id : NP_001036191.1

name	Pcdh8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181162 CCDS:CCDS27303.1 GeneID:18530 MGI:1306800
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0007156 - homophilic cell adhesion [Evidence IEA]; GO:0016331 - morphogenesis of embryonic epithelium [Evidence IMP]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : protocadherin 8 isoform 1 protein_id : NP_067518.2

name	EG629734 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702326 GeneID:629734 MGI:3647443
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC629734 protein_id : NP_001033025.1

name	LOC673649 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673649
definition	number : 1 pseudo : _no_value

name	LOC673649 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673649
definition	number : 2 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 1 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 2 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 3 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 4 pseudo : _no_value

name	LOC219180 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265692 GeneID:219180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_034373.1

name	LOC629709 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265815 GeneID:629709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs, 4 Proteins product : similar to Mitochondrial ribosomal protein L22 pseudo : _no_value transcript_id : XR_034909.1

clone name	MSMg01-366C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-298L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062P15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-490B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-079L16.b	B6Ng01-079L16.g
ACC	DH895055	DH895056
length	1,234	1,173
definition	DH895055\|Mus musculus domesticus DNA, BAC clone: B6Ng01-079L16, 5' end.	DH895056\|Mus musculus domesticus DNA, BAC clone: B6Ng01-079L16, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcatattggttccctgaactgtagagtgagggctattatggttg gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg aatcaaaaacagtatcgtattcctggaggaattgcagaaattactgccac tatcaaggacttgaaagatgcaggggtggtggtttccaccacatctccat ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg acagttgattaccgaaaactaaatcaggtagtaactccaattgcagctgc tgtaccagatgtagtttccttacttgagcaaattaacacatctcctggca cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc acattggtgcactatattgatgacattatgctgattggaccaagtgagca ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt gaaagataagttattgcacctggcccctcctacaaccaagaaagaagcac aacgtttagtgggtctatttggattctggagacaacacatccctcacttg ggtgtgttacttatgcctatttaccaagtgactcggaagctgctagcttt gtgtggggcctggaacaggagaagcccttcaacagtccaggctgctgtgc agctgctctaccacttggacatatgaccagcagatccgatggtacttgag tgtctgtgctgatagagatgctgtttggagcctctgcaggccctgtagtg aatcacagaaagctttggatttggagcaagtttaccatcatctgcgacac tttctcccttgaaaagctctgctgcattggctatgaactgaacgctgaaa tgatccaggtcaatgcaactgaatcattgactgcatcgacctgagtctta attgaagttcagagcagcttatttcatgtgagtg	gaattctcttgttttgcttgcctgtctccctccaaggcctcagcctgtgt gcaatgacacaggctgttgagttctgtgtccccttcatgactgcccaagg ggcttctagtcagaaaaggaaggaagctcttagtttctacatcccaggtc ctttttgtgataagctaaaggcaaatgtgttttcttccttgttagtatta ttttgtcctttcccagctgcagaggattcagtcaaagtgaactagaatat tctcagtctttcatgtgtgacgtattgagttgtttatacagtgtgattaa aaatgaagttgaagctgggcagtggtggtgcacacccttaatcccagcac ttgggaggcagacaggtggatttctgtgttcgaggccagcctggtctaca aagtgagttccaggacagccagggctacacagagaaaccctgtcttgaaa aaacaaaacacaaaacaaaacaaaaaaacccaaagttgacattgaaacct tgtttgtatgtatttcatgttggtggaagtgcatttccaggataatgctg gaagtccattgctaaatagatctgccttctttgcgtagacttactcttaa ctcctttgtaagaactgtgccaattgagcaccttccaccaacaccgctag actagaacctgtcagagtgcgcacatttcgcccgtctggcagttgacatg cgtcttagtacagctttaattttcttaggaaaagttgaattttttatttt tttgtaagagcttattaagatacagtttgttaatagagaatctcatataa agattcattttaatatctttataattcatctgtttcattttggtttgctt attttctgtatgaagtccttcatttttaaaaataaacccaaaccttaaaa aacaggtttgtttatcctatgtgtgtaaatgtttcgtttgtatggatgtg tgtatcccatgagtttgcagtatgcaacggaggccacttgagagtgcaga actctggaagtgggagtttggattggtcgtgagccacagtggttggtact gggaatctgaattcagtctcttggaagaacagccaatcctcaaacagctg gagtcatttctccagccctgaccttctgaaattaatgtactagaatttat tgggtggtattacttcccaactt
quality values	Open. Hide. 61 47 24 35 61 61 61 36 35 61 61 61 61 61 47 61 61 61 61 61 61 61 49 43 43 52 59 35 32 21 36 36 43 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 59 61 61 59 59 61 61 59 61 59 59 59 61 59 61 59 61 49 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 55 59 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 61 61 55 52 61 55 55 50 55 55 55 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 41 61 55 55 50 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 55 55 55 50 50 61 61 61 61 61 61 55 55 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 50 50 55 61 61 61 61 61 61 61 61 61 61 50 50 61 61 50 61 61 61 61 61 61 61 61 61 50 61 61 61 53 61 61 61 61 53 61 61 53 50 61 61 50 61 53 61 61 61 61 61 61 61 61 61 53 43 50 53 61 61 61 50 53 61 52 61 50 61 50 61 61 53 53 61 61 61 53 61 61 61 61 61 45 61 53 53 61 61 61 61 61 61 61 61 61 40 50 53 61 42 40 53 50 53 53 47 53 53 61 57 53 53 53 57 53 57 53 53 53 53 57 53 57 57 45 50 53 53 57 53 57 53 53 50 53 53 52 53 53 47 32 47 47 43 39 50 50 57 57 53 53 53 53 50 53 53 57 53 45 40 45 47 53 39 47 30 53 40 57 57 53 52 57 47 57 50 53 52 53 57 53 47 52 57 50 53 53 53 53 53 53 52 57 57 53 45 53 52 50 30 53 57 52 52 57 53 57 57 37 30 57 57 53 52 39 52 23 53 53 53 47 52 50 53 52 32 43 52 57 45 50 53 37 53 39 52 57 53 42 57 53 57 53 52 52 47 23 52 52 30 41 53 53 53 38 52 52 50 37 53 50 50 53 47 52 53 52 53 52 37 53 50 21 52 16 57 37 29 57 57 53 34 57 53 32 40 52 46 37 42 53 26 34 52 57 35 43 57 53 36 53 38 38 38 47 57 31 25 57 34 53 52 44 36 53 52 52 47 44 31 53 52 52 53 38 36 47 44 36 37 53 33 52 53 34 37 38 39 28 53 52 53 40 47 53 53 52 29 25 34 33 41 37 37 36 40 43 57 36 33 29 33 31 37 29 39 33 38 44 37 33 40 13 23 17 33 48 57 53 35 40 34 30 44 27 40 48 39 34 47 31 25 30 46 32 31 44 32 27 44 30 44 30 30 48 32 36 32 30 31 31 47 30 51 37 46 46 47 29 48 47 16 30 29 29 35 41 35 29 29 51 48 39 31 29 47 31 36 29 34 33 36 27 47 38 29 26 29 17 21 24 29 41 29 33 25 28 17 27 27 31 22 26 32 29 28 43 29 29 28 33 32 29 31 25 39 34 29 29 23 31 22 23 23 23 28 26 13 4 12 13 29 28 28 28 46 36 21 28 29 18 29 29 35 33 33 29 29 28 16 15 46 16 15 28 35 34 31 34 27 20 28 34 41 24 23 26 25 23 33 51 46 39 20 24 14 22 25 33 14 23 11 27 17 11 7 7 8 6 6 31 18 20 34 25 33 6 10 9 16 12 24 30 22 27 29 29 27 25 19 28 28 28 19 15 9 23 16 28 30 15 21 14 13 28 26 15 19 20 14 16 13 18 22 29 8 25 18 17 14 24 20 23 16 11 22 19 12 34 19 19 38 12 33 14 23 28 9 22 25 25 31 11 7 13 7 29 8 10 8 10 8 30 5 9 21 17 6 5 4 11 5 9 7 22 22 26 9 11 30 9 18 13 30 11 24 19 6 7 9 26 13 12 22 7 12 25 24 11 9 10 6 13 4 6 20 7 10 11 7 7 5 4 10 18 9 4 3 4 22 9 11 11 15 14 27 25 14 6 5 3 5 6 25 6 4 4 8 7 24 16 9 14 23 11 11 8 19 10 5 3 10 5 18 11 4 3 5 5 8 7 14 13 7 10 5 14 19 9 5 4 8 4 5 11 7 3 1 3 4 3 5 12 7 12 3 5 8 6 7 3 4 10 13 15 10 10 16 9 5 7 11 3 2 5 4 17 4 4 13 13 11 5 4 13 20 5 4 20 10 6 4 5 20 6 10 5 7 4 4 1 5 6 5 5 6 4 4 2 1 13 12 4 13 8 9 4 3 3 4 3 4 5 4 7 7 1 3 14 1 2 3 2 3 3 3 3 2 3 15 13 4 6 4 6 6 7 9 6 6 20 4 12 6 5 15 4 4 13	Open. Hide. 61 61 55 39 15 22 13 21 19 21 19 15 15 49 43 49 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 61 61 61 61 61 61 61 61 61 61 59 59 52 41 28 28 44 52 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 55 59 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 59 59 59 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 59 59 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 55 61 49 52 55 61 55 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 55 61 61 61 61 61 61 61 49 41 49 49 50 55 61 61 61 61 61 61 61 61 55 61 55 55 55 55 61 55 55 55 55 50 55 55 61 61 61 55 53 52 52 50 50 53 61 53 61 47 61 53 53 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 61 61 53 53 61 47 61 61 61 61 61 61 61 61 61 61 61 45 50 61 46 52 61 52 52 50 47 45 43 61 42 30 45 61 53 61 61 61 61 61 61 61 45 45 45 47 45 50 53 57 57 53 53 57 47 52 57 50 57 53 52 53 53 43 53 40 39 53 43 57 53 57 52 53 53 53 25 53 47 53 53 38 53 53 53 53 40 53 57 52 43 52 53 43 43 53 53 45 42 57 50 57 47 47 53 57 45 53 53 47 32 47 50 57 53 38 23 43 45 45 50 50 41 50 50 28 50 50 50 53 53 40 38 50 45 45 47 45 36 36 32 41 40 31 52 45 47 47 46 53 45 53 53 23 57 38 42 53 33 31 45 37 35 34 50 38 57 43 36 43 23 23 43 21 38 35 53 41 23 53 30 52 47 38 36 31 50 50 39 37 30 40 42 57 23 40 16 32 50 44 38 33 40 57 57 19 12 47 22 57 57 31 22 41 10 24 20 37 52 38 22 36 30 30 29 21 34 16 12 57 57 53 53 20 28 29 53 57 57 57 57 33 29 29 42 40 25 53 26 32 57 57 36 33 27 29 41 22 42 29 33 33 23 30 18 57 8 40 18 41 47 29 21 44 33 53 29 53 37 29 39 41 39 20 29 27 27 17 53 13 14 26 25 22 39 23 23 53 47 17 29 29 15 26 30 32 18 33 21 32 24 39 32 10 43 46 25 13 32 14 33 8 47 6 29 25 38 36 36 31 15 29 32 45 16 34 28 19 12 38 37 51 51 29 47 23 32 10 24 6 28 30 19 21 26 26 13 22 29 28 14 23 46 51 51 23 14 48 46 47 48 29 28 47 24 30 43 30 19 31 25 18 26 29 29 30 46 39 43 46 36 18 7 16 29 13 43 6 11 23 11 17 17 7 14 40 14 25 21 29 16 29 23 30 9 12 32 22 13 38 9 29 19 21 16 28 51 7 20 9 25 31 40 28 28 12 15 16 30 11 46 17 24 26 27 51 39 25 25 35 29 15 7 51 33 12 23 23 23 29 27 24 11 14 6 9 22 33 13 29 25 24 24 18 9 8 7 6 9 30 14 35 8 9 11 10 4 5 13 29 12 9 19 32 6 16 16 30 8 10 7 33 6 17 14 19 36 34 8 12 6 5 6 21 10 12 34 22 23 12 7 5 7 15 16 7 5 7 10 10 8 5 6 28 29 16 8 6 6 6 25 29 7 13 5 6 6 6 13 30 9 11 35 14 13 4 14 5 8 6 7 30 12 30 7 6 16 12 13 10 5 11 9 13 9 12 29 9 5 6 4 5 10 6 7 12 6 4 16 8 9 5 9 13 5 7 22 17 5 3 4 18 13 25 12 36 17 9 14 7 7 6 9 7 14 6 5 20 24 9 4 2 2 7 5 8 4 4 9 10 25 7 21 16 10 26 15 10 15 15 11 5 7 5 10 8 6 2 22 11 6 3 5 3 3 6 12 9 7 5 13 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_79357199_79358368
seq2: B6Ng01-079L16.g_69_1241

seq1  GAATTCTCTTGTTTTGCTTGCCTGTCTCCCTCCAAGGCCTCAGCCTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGTTTTGCTTGCCTGTCTCCCTCCAAGGCCTCAGCCTGTGT  50

seq1  GCAATGACACAGGCTGTTGAGTTCTGTGTCCCCTTCATGACTGCCCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACACAGGCTGTTGAGTTCTGTGTCCCCTTCATGACTGCCCAAGG  100

seq1  GGCTTCTAGTCAGAAAAGGAAGGAAGCTCTTAGTTTCTACATCCCAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTAGTCAGAAAAGGAAGGAAGCTCTTAGTTTCTACATCCCAGGTC  150

seq1  CTTTTTGTGATAAGCTAAAGGCAAATGTGTTTTCTTCCTTGTTAGTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTGATAAGCTAAAGGCAAATGTGTTTTCTTCCTTGTTAGTATTA  200

seq1  TTTTGTCCTTTCCCAGCTGCAGAGGATTCAGTCAAAGTGAACTAGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCCTTTCCCAGCTGCAGAGGATTCAGTCAAAGTGAACTAGAATAT  250

seq1  TCTCAGTCTTTCATGTGTGACGTATTGAGTTGTTTATACAGTGTGATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTCTTTCATGTGTGACGTATTGAGTTGTTTATACAGTGTGATTAA  300

seq1  AAATGAAGTTGAAGCTGGGCAGTGGTGGTGCACACCCTTAATCCCAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGTTGAAGCTGGGCAGTGGTGGTGCACACCCTTAATCCCAGCAC  350

seq1  TTGGGAGGCAGACAGGTGGATTTCTGTGTTCGAGGCCAGCCTGGTCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGCAGACAGGTGGATTTCTGTGTTCGAGGCCAGCCTGGTCTACA  400

seq1  AAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAA  450

seq1  AAACAAAACACAAAACAAAACAAAAAAACCCAAAGTTGACATTGAAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACACAAAACAAAACAAAAAAACCCAAAGTTGACATTGAAACCT  500

seq1  TGTTTGTATGTATTTCATGTTGGTGGAAGTGCATTTCCAGGATAATGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTATGTATTTCATGTTGGTGGAAGTGCATTTCCAGGATAATGCTG  550

seq1  GAAGTCCATTGCTAAATAGATCTGCCTTCTTTGCGTAGACTTACTCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCATTGCTAAATAGATCTGCCTTCTTTGCGTAGACTTACTCTTAA  600

seq1  CTCCTTTGTAAGAACTGTGCCAATTGAGCACCTTCCACCAACACCGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGTAAGAACTGTGCCAATTGAGCACCTTCCACCAACACCGCTAG  650

seq1  ACTAGAACCTGTCAGAGTGCGCACATTTCGCCCGTCTGGCAGTTGACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAACCTGTCAGAGTGCGCACATTTCGCCCGTCTGGCAGTTGACATG  700

seq1  CGTCTTAGTACAGCTTTAATTTTCTTAGGAAAAAGTTGAATTTTTTATTT  750
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGTCTTAGTACAGCTTTAATTTTCTTAGG-AAAAGTTGAATTTTTTATTT  749

seq1  TTTTGTAAGAGCTTTATTAAGATACAG-TTGTTAATAGAGAATCTCATAT  799
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  TTTTGTAAGAGC-TTATTAAGATACAGTTTGTTAATAGAGAATCTCATAT  798

seq1  -AAGATTCATTTTAATATCTTTATAATTCATCTG-TTCATTTT-GTTTGC  846
       ||||||||||||||||||||||||||||||||| |||||||| ||||||
seq2  AAAGATTCATTTTAATATCTTTATAATTCATCTGTTTCATTTTGGTTTGC  848

seq1  TTATTTTCTGTATGAAGTCCTTCATTTTTAAAAATAAACCCAAACCTTAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTGTATGAAGTCCTTCATTTTTAAAAATAAACCCAAACCTTAA  898

seq1  AAAACAGGTTTGTTTTATCCTATGTGTGTAAATGTTTCGTTTGTATGGAT  946
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGTTTG-TTTATCCTATGTGTGTAAATGTTTCGTTTGTATGGAT  947

seq1  GTGTGTATCCCATGAGTTTGCAGTATGC-ACGGAGGCCAC-TGAGAGTGC  994
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  GTGTGTATCCCATGAGTTTGCAGTATGCAACGGAGGCCACTTGAGAGTGC  997

seq1  TAGAACTCTTGGAAGT-GGAGTTTGGA-TGGTCGTGAGCCACAGT-GTGG  1041
       ||||||| ||||||| |||||||||| ||||||||||||||||| || |
seq2  -AGAACTC-TGGAAGTGGGAGTTTGGATTGGTCGTGAGCCACAGTGGTTG  1045

seq1  GTACTGGGAA-CTGAATCCAGGTCCTCTGGAAGAACAGCCAATCCTCTAA  1090
      |||||||||| |||||| || |||   |||||||||||||||||||| ||
seq2  GTACTGGGAATCTGAATTCA-GTCTCTTGGAAGAACAGCCAATCCTC-AA  1093

seq1  ACAGCT-GAGTCATTTCTCCAGCCCTGA-CTTCTGAATTTTTAATGTACT  1138
      |||||| ||||||||||||||||||||| ||||||||   ||||||||||
seq2  ACAGCTGGAGTCATTTCTCCAGCCCTGACCTTCTGAA--ATTAATGTACT  1141

seq1  AG-ATTTATTGGTGGTTTTTACTTTCTCAACTT  1170
      || |||||||||  | | |||| ||| ||||||
seq2  AGAATTTATTGGGTGGTATTAC-TTCCCAACTT  1173

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information