BAC Information

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BAC

Clone NameB6Ng01-079M13
Chromosome14 (Build37)
Map Location 90,980,459 - 91,109,358
singlet/doubletdoublet
Overlap genenone
Upstream geneEG328451, LOC100043336
Downstream geneEG639558
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079M13.bB6Ng01-079M13.g
ACCDH895095DH895096
length1,1011,099
definitionDH895095|Mus musculus domesticus DNA, BAC clone: B6Ng01-079M13, 5' end.DH895096|Mus musculus domesticus DNA, BAC clone: B6Ng01-079M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,980,459 - 90,981,565)(91,108,245 - 91,109,358)
sequence
gaattcaggcagacacacatttgggcctgtaatgtaagattcaggtttct
tggtaaaccttatgaataatttattgtgtaaaaaaatgttatttaacatt
tggtaaccacttttcttcatcagagtatttttatctataagcatttcaaa
agactcttgctgggttaagcagaaagggaatttattaaggagttattagg
cagctcacaaaatcattattaaggctgaacactagccagatgctaagcag
taagaaaagtgccccccaaccttattttaatgactagaacatgttgctgg
tgtatactagctaacctcagcacctcctaaaatcatttcccaaactgttt
ctggtaatgtatcttgtttgtgctgttacttctacaaactcatgaggcac
attaatgcctttgccacagcccccgaatttgcactagtactatgtatctg
tgtgccagagcttgggtcacctgcttgtgtcttgattaatttagatccag
ggaagttaagcaattatcactggcaactcctttggtagcagacactacag
caggtttaaaattcctaatgtaaagcctgctcaaaacattgaaaagtaaa
agatccttaaaaacatgtaattgagagacactgtgctcagataaaaacta
agaaagatttatccaaacaagcacataatacggtggtgactagtaaatac
ttattagttaagtgaaactaaattcttgcaggtatctggttatagactct
attttcaatgttgaaaaataacataaattataagaaagacaatttttgag
aaatatacatatgaaagaatatcattttttaaaaaatttaaatcatttcc
atacaaaatatttgattatatatacagagtttttcagaatgcagtattat
gaggttcttcatataacagcacattattaacttttggtgggggaaaattt
ttccccaaaaaatatatctataagttattttatttttgaaaaatagacat
tcatcttattacaactgaaatctttgatttacacatcttcttatgtaaat
gttatgtgatttaatggaattaagttattaaagttaattttattaacctc
t
gaattctttgtctcactctcctttcatccgttccctgtttattgagaatg
tgtgtatgtgtatatgaatgatacctacaaagttcagaagagagtgtcag
attccctggaactggggtcatggttgattgtgagttctgggaagcagaca
catggttcacatatatgcaaccaagacattcatactcttaaaaataaaag
taaataaatctaaaacatattttaagtatcttgatggggaaaatgaattg
cattgttttcttttaacttctgctacttcagtctcattaaaatttaaatc
tttggtctacaatttccagcacattttgattctttgggctattatttatt
taatatatattgtgtcatctgacctccccttcagatattaaaatgaaaat
tgtatcaattatggttatgtttgtggatttttttttaatttttattttgg
aggattctctgtctcttcatgcaaccttgtaatgttttcttctgtagtat
ctagctttcagtcccactccatatttttcccagttaaagcatctgcattc
atttggaggaatctgaactgggacagtttaaacgttttcaatgcttgtgc
ttttattatatactttcaacttgtcatcgagtttccaaacactcagcccc
ttggcagagagtactaggacttttatttgctggctctgcctgctgctaag
cttataaaatattcttccttggaggtaataacaattcatttgattttcct
ctgaagttttcatttctgcctccattacctatttccatacatgatattac
ttattgttggggttttaatttatcgaaaaattctatattctatgttttgt
atgtgtcatgtatgttagcttctggtctatttcttctttaaaactcttct
tctgtctctctctctctcttctctctctgtctctgtctctgcctctctct
actttcttcagtgggtgtgtgtgtgtgtgttttgggttatttaatgctct
aaattaatgacgaggggagaattcatttgagaaggcatgtttcagtgcac
gctccctattacggcatggggcttggggatgtttagtttccgtgctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90980459_90981565
seq2: B6Ng01-079M13.b_49_1149

seq1  GAATTCAGGCAGACACACATTTGGGCCTGTAATGTAAGATTCAGGTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAGACACACATTTGGGCCTGTAATGTAAGATTCAGGTTTCT  50

seq1  TGGTAAACCTTATGAATAATTTATTGTGTAAAAAAATGTTATTTAACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAACCTTATGAATAATTTATTGTGTAAAAAAATGTTATTTAACATT  100

seq1  TGGTAACCACTTTTCTTCATCAGAGTATTTTTATCTATAAGCATTTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACCACTTTTCTTCATCAGAGTATTTTTATCTATAAGCATTTCAAA  150

seq1  AGACTCTTGCTGGGTTAAGCAGAAAGGGAATTTATTAAGGAGTTATTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTGCTGGGTTAAGCAGAAAGGGAATTTATTAAGGAGTTATTAGG  200

seq1  CAGCTCACAAAATCATTATTAAGGCTGAACACTAGCCAGATGCTAAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACAAAATCATTATTAAGGCTGAACACTAGCCAGATGCTAAGCAG  250

seq1  TAAGAAAAGTGCCCCCCAACCTTATTTTAATGACTAGAACATGTTGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAGTGCCCCCCAACCTTATTTTAATGACTAGAACATGTTGCTGG  300

seq1  TGTATACTAGCTAACCTCAGCACCTCCTAAAATCATTTCCCAAACTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTAGCTAACCTCAGCACCTCCTAAAATCATTTCCCAAACTGTTT  350

seq1  CTGGTAATGTATCTTGTTTGTGCTGTTACTTCTACAAACTCATGAGGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAATGTATCTTGTTTGTGCTGTTACTTCTACAAACTCATGAGGCAC  400

seq1  ATTAATGCCTTTGCCACAGCCCCCGAATTTGCACTAGTACTATGTATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGCCTTTGCCACAGCCCCCGAATTTGCACTAGTACTATGTATCTG  450

seq1  TGTGCCAGAGCTTGGGTCACCTGCTTGTGTCTTGATTAATTTAGATCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGAGCTTGGGTCACCTGCTTGTGTCTTGATTAATTTAGATCCAG  500

seq1  GGAAGTTAAGCAATTATCACTGGCAACTCCTTTGGTAGCAGACACTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTAAGCAATTATCACTGGCAACTCCTTTGGTAGCAGACACTACAG  550

seq1  CAGGTTTAAAATTCCTAATGTAAAGCCTGCTCAAAACATTGAAAAGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTAAAATTCCTAATGTAAAGCCTGCTCAAAACATTGAAAAGTAAA  600

seq1  AGATCCTTAAAAACATGTAATTGAGAGACACTGTGCTCAGATAAAAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTTAAAAACATGTAATTGAGAGACACTGTGCTCAGATAAAAACTA  650

seq1  AGAAAGATTTATCCAAACAAGCACATAATACGGTGGTGACTAGTAAATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATTTATCCAAACAAGCACATAATACGGTGGTGACTAGTAAATAC  700

seq1  TTATTAGTTAAGTGAAACTAAATTCTTGCAGGTATCTGGTTATAGACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTTAAGTGAAACTAAATTCTTGCAGGTATCTGGTTATAGACTCT  750

seq1  ATTTTCAATGTTGAAAAATAACATAAATTATAAGAAAGACAATTTTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAATGTTGAAAAATAACATAAATTATAAGAAAGACAATTTTTGAG  800

seq1  AAATATACATATGAAAGAATATCATTTTTTAAAAAATTTAAATCATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACATATGAAAGAATATCATTTTTTAAAAAATTTAAATCATTTCC  850

seq1  ATACAAAATATTTGATTATATATACAGAGTTTTTCAGAATGCAGTATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAATATTTGATTATATATACAGAGTTTTTCAGAATGCAGTATTAT  900

seq1  GAGGTTCTTCATATAACAGCACATTATTAACTTTTGGTGGGGGAAAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCTTCATATAACAGCACATTATTAACTTTTGGTGGGGGAAAATTT  950

seq1  TTCCCCAAAAAATATATCTATAAAGTTATTTTATTTTTGAAAAAATAGAC  1000
      ||||||||||||||||||||| ||||||||||||||||| ||||||||||
seq2  TTCCCCAAAAAATATATCTAT-AAGTTATTTTATTTTTG-AAAAATAGAC  998

seq1  ATTCATCTTATTACAACTGAAAATCTTTGATTTTACACATCTTCTTATGT  1050
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  ATTCATCTTATTACAACTG-AAATCTTTGA-TTTACACATCTTCTTATGT  1046

seq1  AAAATGTTATGTGATTTAATGGAATTAAGTTATTATAGTTAATTTTTATT  1100
       |||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  -AAATGTTATGTGATTTAATGGAATTAAGTTATTAAAGTTAA-TTTTATT  1094

seq1  AACCTCT  1107
      |||||||
seq2  AACCTCT  1101

seq1: chr14_91108245_91109358
seq2: B6Ng01-079M13.g_70_1168 (reverse)

seq1  CACAGC----AAACTAAACATCCCCAAACTCCAGCCAGATTAATAGGGAG  46
      ||||||    ||||||||||||||||| | |||  | |  ||||||||||
seq2  CACAGCACGGAAACTAAACATCCCCAAGCCCCATGCCG--TAATAGGGAG  48

seq1  CGTGCTACTGAAACACTGCTTTCTTCCAATTGTATTTCTCACCTCCATCA  96
      ||||| ||||||||| ||| ||||  ||| || | ||||| ||| | || 
seq2  CGTGC-ACTGAAACA-TGCCTTCT--CAAATG-AATTCTCCCCT-CGTC-  91

seq1  ATTAATTATAAGAGCATATAAAATAACACAAAACACACACACACACAACC  146
      ||||||  | |||||  || ||||||| |||||||||||||||||| |||
seq2  ATTAAT--TTAGAGC--ATTAAATAACCCAAAACACACACACACAC-ACC  136

seq1  CACATGAAAGAAAGTAAGAGAGAGGCAGAGACAGAGACAGAGAGAGAAAG  196
      ||| || |||||||| |||||||||||||||||||||||||||||| |||
seq2  CAC-TG-AAGAAAGT-AGAGAGAGGCAGAGACAGAGACAGAGAGAG-AAG  182

seq1  AGAGAGAGAGAGACAGAAGAAGAGTTTTAAAGAAGAAAATAGACCAGAAG  246
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGAGAGAGAGAGACAGAAGAAGAGTTTTAAAGAAG-AAATAGACCAGAAG  231

seq1  CTAACATACATGACACATACAAAACATAGAATATAGAATTTTTCGATAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATACATGACACATACAAAACATAGAATATAGAATTTTTCGATAAA  281

seq1  TTAAAACCCCAACAATAAGTAATATCATGTATGGAAATAGGTAATGGAGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCCCAACAATAAGTAATATCATGTATGGAAATAGGTAATGGAGG  331

seq1  CAGAAATGAAAACTTCAGAGGAAAATCAAATGAATTGTTATTACCTCCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGAAAACTTCAGAGGAAAATCAAATGAATTGTTATTACCTCCAA  381

seq1  GGAAGAATATTTTATAAGCTTAGCAGCAGGCAGAGCCAGCAAATAAAAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAATATTTTATAAGCTTAGCAGCAGGCAGAGCCAGCAAATAAAAGT  431

seq1  CCTAGTACTCTCTGCCAAGGGGCTGAGTGTTTGGAAACTCGATGACAAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTACTCTCTGCCAAGGGGCTGAGTGTTTGGAAACTCGATGACAAGT  481

seq1  TGAAAGTATATAATAAAAGCACAAGCATTGAAAACGTTTAAACTGTCCCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTATATAATAAAAGCACAAGCATTGAAAACGTTTAAACTGTCCCA  531

seq1  GTTCAGATTCCTCCAAATGAATGCAGATGCTTTAACTGGGAAAAATATGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGATTCCTCCAAATGAATGCAGATGCTTTAACTGGGAAAAATATGG  581

seq1  AGTGGGACTGAAAGCTAGATACTACAGAAGAAAACATTACAAGGTTGCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACTGAAAGCTAGATACTACAGAAGAAAACATTACAAGGTTGCAT  631

seq1  GAAGAGACAGAGAATCCTCCAAAATAAAAATTAAAAAAAAATCCACAAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACAGAGAATCCTCCAAAATAAAAATTAAAAAAAAATCCACAAAC  681

seq1  ATAACCATAATTGATACAATTTTCATTTTAATATCTGAAGGGGAGGTCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCATAATTGATACAATTTTCATTTTAATATCTGAAGGGGAGGTCAG  731

seq1  ATGACACAATATATATTAAATAAATAATAGCCCAAAGAATCAAAATGTGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACAATATATATTAAATAAATAATAGCCCAAAGAATCAAAATGTGC  781

seq1  TGGAAATTGTAGACCAAAGATTTAAATTTTAATGAGACTGAAGTAGCAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTGTAGACCAAAGATTTAAATTTTAATGAGACTGAAGTAGCAGA  831

seq1  AGTTAAAAGAAAACAATGCAATTCATTTTCCCCATCAAGATACTTAAAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAAGAAAACAATGCAATTCATTTTCCCCATCAAGATACTTAAAAT  881

seq1  ATGTTTTAGATTTATTTACTTTTATTTTTAAGAGTATGAATGTCTTGGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAGATTTATTTACTTTTATTTTTAAGAGTATGAATGTCTTGGTT  931

seq1  GCATATATGTGAACCATGTGTCTGCTTCCCAGAACTCACAATCAACCATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATATGTGAACCATGTGTCTGCTTCCCAGAACTCACAATCAACCATG  981

seq1  ACCCCAGTTCCAGGGAATCTGACACTCTCTTCTGAACTTTGTAGGTATCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGTTCCAGGGAATCTGACACTCTCTTCTGAACTTTGTAGGTATCA  1031

seq1  TTCATATACACATACACACATTCTCAATAAACAGGGAACGGATGAAAGGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATACACATACACACATTCTCAATAAACAGGGAACGGATGAAAGGA  1081

seq1  GAGTGAGACAAAGAATTC  1114
      ||||||||||||||||||
seq2  GAGTGAGACAAAGAATTC  1099