BAC Information

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BAC

Clone NameB6Ng01-080M10
Chromosome14 (Build37)
Map Location 108,594,543 - 108,595,659
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080M10.bB6Ng01-080M10.g
ACCDH895816DH895817
length1,1191,174
definitionDH895816|Mus musculus domesticus DNA, BAC clone: B6Ng01-080M10, 5' end.DH895817|Mus musculus domesticus DNA, BAC clone: B6Ng01-080M10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggtaagcacgtgtttgatactaagttaaatgaatttcttgcc
atatattcaagttatgaaattgtaattagccaaactctattgttaatgaa
atacccacgatgtgaggactccaccacgttctgactcaggagaggcaaca
ccccatatcactcacgagaaatggtcttgctgcaaactgcaagaggactt
ttaattcaagagagctctcgggcccatggtcatacaccacgcaggggtag
aggaccttggcgtcctgagtacctgggtaagggggtatttaaaggaagaa
accacaactcaaggaagtgggaagggcattgttggaaaataccaaagata
ccagttaagagtcacagggaagtgcaaagtcacaagagtcacaatgaata
cctggtaattgttcgggttatctctcaagacagtttctaagagcccctaa
caatagcacattctttgaatgaacactctttgaacccaggtgggtggagg
aatgttgctatctgttttatgattagcattccttggagcgttgaggcaca
gaggtcacattcccaagcctgggcctaaaggcctagaattttgctttcat
attttgttccattacaacacaacttaacacttcattctattgaacaacta
ggattgcattcttgatacttaccatacttatgaagatattacataaaata
acaaattctgtgtatctagggataaactatttagttgaacataacttagt
atattaatagctaaggatagttttcaatcttccccaagggaacttcactt
tgtactgtatggagacaactatagaaaaccataaccaactaaaacgcagt
ttactgccttgtttcttaacactagtcacatccacatgacatgttttaat
ataacaatcagtaagaatgtagcagcatcttttatatctgaggtcatttc
tgtttctttatacatataaatcttttcatgaagtcaataatagaaatgag
gaatccagagtgaaatttaataatgcatgcctcatattcttagatcagta
gtacacaaaggtagcccttaacttttttccaaatttttaacagaagaaat
cacctgaaaactattcctt
gaattcaacaggaagaccaaagtaatcaactagcctggacccttgggggc
tcttagagtctgaaccacagaccaaagaacatacatgatctaaacaggca
cctgcatatatgtggccgattcacagcttggtcttcatgtagttcctaaa
tagttggagtatgggttatctgtaaagctgttgcctaactgtggattttt
tcccctaacttggctaacctttctggtctcagttgagaaaaagtgccttg
ctctgcagagacttgaagtgccaaggttgggcgatatggggcgctccatt
ctctcagaggggaagggaagggagaaagaagagaaaggctgtgggaggga
agacatggaaggggaataatgttcaggatataaagtgaataaataaaaat
gtttttctagaaaatatttgagattatattaaaataacttcatttcaccc
tttctttttcattcctctgaaaccttccatatagtcttttttttcctgtc
tttcatagtcttgcacactttttctttaattattgtcacacatacatttc
taaatacataaatataataatctcaattaatatgatctatataaatgtag
agctgatcatttagtattagacctgaggactatgtttcctggtactagta
gacattgtgaaagtttcaaaaggagggatgcaaccaacattcctagccag
ctctgacgcctatgtagcacagcaaaggtagggatggcaacataacccta
agtgtgtggcagtggctcacgacattgtaaatagcaggttcctgttggat
ataacatctgctctctaacagacaaagcatcctgagtaatggaaactcag
ctaactagtaaagtcatggctcttgacagagagcctaaaactgtcaaggt
attggataggaggagagcctacaactgtcaaggtagtggacaccccttgc
aatcccacatctacatttaaatagctagcctatacctacaggttagtgca
gtcctcacccttcaccaccatccttacctttgcacagacttaactatggg
aaaggctggaatatagaaaccagcctatgggaatgaaagtaagatatatt
tttaaaaattagacagtccgtgaaagaagtctagaagtcattaaacctgc
ctcaaagcctttgaactgcgttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108594543_108595659
seq2: B6Ng01-080M10.b_47_1165

seq1  GAATTCAAGGTAAGCACGTGTTTGATACTAAGTTAAATGAATTTCTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTAAGCACGTGTTTGATACTAAGTTAAATGAATTTCTTGCC  50

seq1  ATATATTCAAGTTATGAAATTGTAATTAGCCAAACTCTATTGTTAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTCAAGTTATGAAATTGTAATTAGCCAAACTCTATTGTTAATGAA  100

seq1  ATACCCACGATGTGAGGACTCCACCACGTTCTGACTCAGGAGAGGCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCACGATGTGAGGACTCCACCACGTTCTGACTCAGGAGAGGCAACA  150

seq1  CCCCATATCACTCACGAGAAATGGTCTTGCTGCAAACTGCAAGAGGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATCACTCACGAGAAATGGTCTTGCTGCAAACTGCAAGAGGACTT  200

seq1  TTAATTCAAGAGAGCTCTCGGGCCCATGGTCATACACCACGCAGGGGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCAAGAGAGCTCTCGGGCCCATGGTCATACACCACGCAGGGGTAG  250

seq1  AGGACCTTGGCGTCCTGAGTACCTGGGTAAGGGGGTATTTAAAGGAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTTGGCGTCCTGAGTACCTGGGTAAGGGGGTATTTAAAGGAAGAA  300

seq1  ACCACAACTCAAGGAAGTGGGAAGGGCATTGTTGGAAAATACCAAAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAACTCAAGGAAGTGGGAAGGGCATTGTTGGAAAATACCAAAGATA  350

seq1  CCAGTTAAGAGTCACAGGGAAGTGCAAAGTCACAAGAGTCACAATGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTAAGAGTCACAGGGAAGTGCAAAGTCACAAGAGTCACAATGAATA  400

seq1  CCTGGTAATTGTTCGGGTTATCTCTCAAGACAGTTTCTAAGAGCCCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTAATTGTTCGGGTTATCTCTCAAGACAGTTTCTAAGAGCCCCTAA  450

seq1  CAATAGCACATTCTTTGAATGAACACTCTTTGAACCCAGGTGGGTGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCACATTCTTTGAATGAACACTCTTTGAACCCAGGTGGGTGGAGG  500

seq1  AATGTTGCTATCTGTTTTATGATTAGCATTCCTTGGAGCGTTGAGGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGCTATCTGTTTTATGATTAGCATTCCTTGGAGCGTTGAGGCACA  550

seq1  GAGGTCACATTCCCAAGCCTGGGCCTAAAGGCCTAGAATTTTGCTTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCACATTCCCAAGCCTGGGCCTAAAGGCCTAGAATTTTGCTTTCAT  600

seq1  ATTTTGTTCCATTACAACACAACTTAACACTTCATTCTATTGAACAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTCCATTACAACACAACTTAACACTTCATTCTATTGAACAACTA  650

seq1  GGATTGCATTCTTGATACTTACCATACTTATGAAGATATTACATAAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCATTCTTGATACTTACCATACTTATGAAGATATTACATAAAATA  700

seq1  ACAAATTCTGTGTATCTAGGGATAAACTATTTAGTTGAACATAACTTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTCTGTGTATCTAGGGATAAACTATTTAGTTGAACATAACTTAGT  750

seq1  ATATTAATAGCTAAGGATAGTTTTCAATCTTCCCCAAGGGAACTTCACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAATAGCTAAGGATAGTTTTCAATCTTCCCCAAGGGAACTTCACTT  800

seq1  TGTACTGTATGGAGACAACTATAGAAAACCATAACCAACTAAAACGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTATGGAGACAACTATAGAAAACCATAACCAACTAAAACGCAGT  850

seq1  TTACTGCCTTGTTTCTTAACACTAGTCACATCCACATGACATGTTTTAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCCTTGTTTCTTAACACTAGTCACATCCACATGACATGTTTTAAT  900

seq1  ATAACAATCAGTAAGAATGTAGCAGCATCTTTTATATCTGAGGTCATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATCAGTAAGAATGTAGCAGCATCTTTTATATCTGAGGTCATTTC  950

seq1  TGTTTCTTTATACATATAAATCTTTTTCATGAAGTCAATAATAGAAATGA  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGTTTCTTTATACATATAAATC-TTTTCATGAAGTCAATAATAGAAATGA  999

seq1  GGAATCCAGAGTGAAATTTAATAAGGCAAGGCTCATA-TCTTAGATCAGT  1049
      |||||||||||||||||||||||| ||| | |||||| ||||||||||||
seq2  GGAATCCAGAGTGAAATTTAATAATGCATGCCTCATATTCTTAGATCAGT  1049

seq1  AAGTACACAAAGGTAGCCC-TAACTTTTTTCCAAA-TTTTAACAGAAGAA  1097
       |||||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  -AGTACACAAAGGTAGCCCTTAACTTTTTTCCAAATTTTTAACAGAAGAA  1098

seq1  ATCA-CTGAAAACTATTCCTT  1117
      |||| ||||||||||||||||
seq2  ATCACCTGAAAACTATTCCTT  1119