BAC Information

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BAC

Clone NameB6Ng01-081C23
Chromosome14 (Build37)
Map Location 77,625,706 - 77,768,866
singlet/doubletdoublet
Overlap geneD230005D02Rik, LOC100043755, LOC676171
Upstream geneLOC100043752, 2900040C04Rik, Tsc22d1, 2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122
Downstream geneEG629678, Gm1587, Dnajc15, Epsti1, AU021034, Tnfsf11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081C23.bB6Ng01-081C23.g
ACCDH896110DH896111
length1,082851
definitionDH896110|Mus musculus domesticus DNA, BAC clone: B6Ng01-081C23, 5' end.DH896111|Mus musculus domesticus DNA, BAC clone: B6Ng01-081C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,767,768 - 77,768,866)(77,625,706 - 77,626,554)
sequence
gaattctgtagttattttattacatggattttactctacttgatcttcaa
gaaacatctaaatcaagaaagatttatcgaggctaaatatattttattta
tggttttagaatatacaaattgttattctcaatgtcagtatcatgtctgt
cttctgctggaatgtaactggaaaaaaaatcctggcagctagctaaaaca
gtactaaggaaactggatatttgtgaaataaatgagtgtctctgcaggag
aacgtgcaaggttagaacttaggaactgagctatctggactggtatcagc
tgagaggagaacgcttagaagctgctgtgttgtgtccatccttagagaca
ggcgcaggctgcaacgtgggtgctggctgtttcccagaggctcacgtggg
cagaatgaagcctccaggctgccacgatcaagaagcggggccctatggga
gggtaccggattcctggggactggctcctcatgtttgtttgtttgtttgt
ttccctggctccagatgtcacttcttacacttctgccagatgttctgcca
caccagaggtgccaaataacatgtgcaacaagtcaaggcttaaaaatctc
accaactgtgatccaaaagaaacattttttttttaccctctcaacaagtt
aacttctctcaggcctgtcattatcaggatggaatgctgacacagactag
atcttcaaccagttcagtagttggctgaaatgtacctgttgtttacatgg
ggtgagcttcagtgttcatgtttataacagaaaggatttgcaaagtataa
acccctggaaaatgaaagagtgggccattactattttggagttaggttat
ttggaattcctatgactaaaccctacctgttttatttccagtgacctgtc
tggaccatctacatcagacggagcagaacacattctctgcagagcagaca
gagcaagcaaaggcatctttctatcagacatcatttgtttgctcatattc
tgaccagagcactgcgtgctattggggattggttttccagaagttaaaat
gccaagagtggattagttgggggccggggtga
gaattctctaagcggagtcaagagggttgcaaatgtgtgctaaacagtga
gttcaagactggtcagggctacaaatactctgactattcagacctccttt
cccccaaaatgatccctttaaataatttgacttaaattgtgtgaatttga
ggtcacactatttcccattcaccgactttcatgtctttaaattgttggga
tttttttgatattttttctaatttcacaaagaactatagtctttggaaat
ctatgtttccatttttgtgtaatcagtgtcattaataaaagtttttaaat
ctaggttaactgctactttttgatggtatttatgtagaaagcatcattca
caatggttgtgcaaaagaacctcagactaacaagcaaaaccttctttgtg
acggcacatcattgttagatatacagttaactgaaaacgttaatgtaaac
cagtaaggtctaggagagcctggtggcttctcccattctattctgtcctg
agcttctcttgtgctccagttactctgccaatggagtgctatttggaaat
ttcctctttccctccctccttcccttcctttctttcttctccctccctcc
cccttcctcctttccttttttccttctttcctttctctctctccctccct
ccctccctcccttctttccttccttcctttttcctttcctccctctcccc
ctcacccctctctcctcccctttctttctttctctcttcttacttaccct
tcctaggtgtaagtggcctagagatccatctttgccttcctccactcaac
aggctcaatacttcttagtactgaaactctcttgagagggcaggaatgaa
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77767768_77768866
seq2: B6Ng01-081C23.b_44_1125 (reverse)

seq1  TCACCCCGCCCCCAACCTAAATCCACTCTTGTGCATTTTTAAAAACTTCT  50
      |||||||| |||| | || |||||||||||| |||||||    |||||| 
seq2  TCACCCCGGCCCCCAACT-AATCCACTCTTG-GCATTTT----AACTTC-  43

seq1  TGGAAAACCCAATCCACAATAGGCACGCAGTGCTCTGGTCAGATTATGAG  100
      ||||||| ||||||| ||||| ||||||||||||||||||||| ||||||
seq2  TGGAAAA-CCAATCCCCAATA-GCACGCAGTGCTCTGGTCAGAATATGAG  91

seq1  CAAACAAATTGATGTCTTGGATAGAAAGATGCCTTTGCTTGGCTCTGTCT  150
      |||||||| ||||||||  ||||||||||||||||||||| |||||||||
seq2  CAAACAAA-TGATGTCT--GATAGAAAGATGCCTTTGCTT-GCTCTGTCT  137

seq1  GCTTCTGCAGAGAATGTTGTTCTGCTCCTTCTTGATGTAGATGGTCCAGA  200
      || ||||||||||||| ||||||||||| || ||||||||||||||||||
seq2  GC-TCTGCAGAGAATG-TGTTCTGCTCCGTC-TGATGTAGATGGTCCAGA  184

seq1  CAGGGTCACTGGAAATAAAACAGGTAGGGTTTAGTCATAGGAATTCCAAA  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GGTCACTGGAAATAAAACAGGTAGGGTTTAGTCATAGGAATTCCAAA  233

seq1  TAACCTAACTCCAAAAATAGTAATGGCCCACTCTTTCATTTTCCAGGGGT  300
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAACCTAACTCC-AAAATAGTAATGGCCCACTCTTTCATTTTCCAGGGGT  282

seq1  TTATACTTTGCAAATCC-TTCTGTTATAAACATGAACACTGAAGCTCACC  349
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTATACTTTGCAAATCCTTTCTGTTATAAACATGAACACTGAAGCTCACC  332

seq1  CCATGTAAACAACAGGTACATTTCAGCCAACTACTGAACTGGTTGAAGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAAACAACAGGTACATTTCAGCCAACTACTGAACTGGTTGAAGAT  382

seq1  CTAGTCTGTGTCAGCATTCCATCCTGATAATGACAGGCCTGAGAGAAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTGTGTCAGCATTCCATCCTGATAATGACAGGCCTGAGAGAAGTT  432

seq1  AACTTGTTGAGAGGGTAAAAAAAAAATGTTTCTTTTGGATCACAGTTGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTTGAGAGGGTAAAAAAAAAATGTTTCTTTTGGATCACAGTTGGT  482

seq1  GAGATTTTTAAGCCTTGACTTGTTGCACATGTTATTTGGCACCTCTGGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTTAAGCCTTGACTTGTTGCACATGTTATTTGGCACCTCTGGTG  532

seq1  TGGCAGAACATCTGGCAGAAGTGTAAGAAGTGACATCTGGAGCCAGGGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAACATCTGGCAGAAGTGTAAGAAGTGACATCTGGAGCCAGGGAA  582

seq1  ACAAACAAACAAACAAACATGAGGAGCCAGTCCCCAGGAATCCGGTACCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACATGAGGAGCCAGTCCCCAGGAATCCGGTACCC  632

seq1  TCCCATAGGGCCCCGCTTCTTGATCGTGGCAGCCTGGAGGCTTCATTCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAGGGCCCCGCTTCTTGATCGTGGCAGCCTGGAGGCTTCATTCTG  682

seq1  CCCACGTGAGCCTCTGGGAAACAGCCAGCACCCACGTTGCAGCCTGCGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGTGAGCCTCTGGGAAACAGCCAGCACCCACGTTGCAGCCTGCGCC  732

seq1  TGTCTCTAAGGATGGACACAACACAGCAGCTTCTAAGCGTTCTCCTCTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTAAGGATGGACACAACACAGCAGCTTCTAAGCGTTCTCCTCTCA  782

seq1  GCTGATACCAGTCCAGATAGCTCAGTTCCTAAGTTCTAACCTTGCACGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATACCAGTCCAGATAGCTCAGTTCCTAAGTTCTAACCTTGCACGTT  832

seq1  CTCCTGCAGAGACACTCATTTATTTCACAAATATCCAGTTTCCTTAGTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCAGAGACACTCATTTATTTCACAAATATCCAGTTTCCTTAGTAC  882

seq1  TGTTTTAGCTAGCTGCCAGGATTTTTTTTCCAGTTACATTCCAGCAGAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGCTAGCTGCCAGGATTTTTTTTCCAGTTACATTCCAGCAGAAG  932

seq1  ACAGACATGATACTGACATTGAGAATAACAATTTGTATATTCTAAAACCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATGATACTGACATTGAGAATAACAATTTGTATATTCTAAAACCA  982

seq1  TAAATAAAATATATTTAGCCTCGATAAATCTTTCTTGATTTAGATGTTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAATATATTTAGCCTCGATAAATCTTTCTTGATTTAGATGTTTC  1032

seq1  TTGAAGATCAAGTAGAGTAAAATCCATGTAATAAAATAACTACAGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATCAAGTAGAGTAAAATCCATGTAATAAAATAACTACAGAATTC  1082

seq1: chr14_77625706_77626554
seq2: B6Ng01-081C23.g_70_920

seq1  GAATTCTCTAAGCGGAGTCAAGAGGGTTGCAAATGTGTGCTAAACAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAGCGGAGTCAAGAGGGTTGCAAATGTGTGCTAAACAGTGA  50

seq1  GTTCAAGACTGGTCAGGGCTACAAATACTCTGACTATTCAGACCTCCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGACTGGTCAGGGCTACAAATACTCTGACTATTCAGACCTCCTTT  100

seq1  CCCCCAAAATGATCCCTTTAAATAATTTGACTTAAATTGTGTGAATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAAATGATCCCTTTAAATAATTTGACTTAAATTGTGTGAATTTGA  150

seq1  GGTCACACTATTTCCCATTCACCGACTTTCATGTCTTTAAATTGTTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACACTATTTCCCATTCACCGACTTTCATGTCTTTAAATTGTTGGGA  200

seq1  TTTTTTTGATATTTTTTCTAATTTCACAAAGAACTATAGTCTTTGGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGATATTTTTTCTAATTTCACAAAGAACTATAGTCTTTGGAAAT  250

seq1  CTATGTTTCCATTTTTGTGTAATCAGTGTCATTAATAAAAGTTTTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTCCATTTTTGTGTAATCAGTGTCATTAATAAAAGTTTTTAAAT  300

seq1  CTAGGTTAACTGCTACTTTTTGATGGTATTTATGTAGAAAGCATCATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTAACTGCTACTTTTTGATGGTATTTATGTAGAAAGCATCATTCA  350

seq1  CAATGGTTGTGCAAAAGAACCTCAGACTAACAAGCAAAACCTTCTTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTTGTGCAAAAGAACCTCAGACTAACAAGCAAAACCTTCTTTGTG  400

seq1  ACGGCACATCATTGTTAGATATACAGTTAACTGAAAACGTTAATGTAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCACATCATTGTTAGATATACAGTTAACTGAAAACGTTAATGTAAAC  450

seq1  CAGTAAGGTCTAGGAGAGCCTGGTGGCTTCTCCCATTCTATTCTGTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGGTCTAGGAGAGCCTGGTGGCTTCTCCCATTCTATTCTGTCCTG  500

seq1  AGCTTCTCTTGTGCTCCAGTTACTCTGCCAATGGAGTGCTATTTGGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCTTGTGCTCCAGTTACTCTGCCAATGGAGTGCTATTTGGAAAT  550

seq1  TTCCTCTTTCCCTCCCTCCTTCCCTTCCTTTCTTTCTTCTCCCTCCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTTCCCTCCCTCCTTCCCTTCCTTTCTTTCTTCTCCCTCCCTCC  600

seq1  CCCTTCCTCCTTTCCTTTTTTCCTTCTTTCC-TTCTCTCTCTCCCTCCCT  649
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCTTCCTCCTTTCCTTTTTTCCTTCTTTCCTTTCTCTCTCTCCCTCCCT  650

seq1  CCCTCCCTCCCTTCTTTCCTTCCTTCCTTTTTCC-TTCCTCCCTCTCCCC  698
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCCTCCCTCCCTTCTTTCCTTCCTTCCTTTTTCCTTTCCTCCCTCTCCCC  700

seq1  CTC-CCCCTCTCTCCCTCCCCCTCTCTTTCTTTCCTCTCTTCTTTCTTAC  747
      ||| |||||||||||   ||||| ||||||||| |||||||||| |||||
seq2  CTCACCCCTCTCTCC--TCCCCTTTCTTTCTTT-CTCTCTTCTTACTTAC  747

seq1  CCTT-CTAGGTGTAAGTGTCTTAGAGATCCATCTTTGCCTTCCTCCACTC  796
      |||| ||||||||||||| | |||||||||||||||||||||||||||||
seq2  CCTTCCTAGGTGTAAGTGGCCTAGAGATCCATCTTTGCCTTCCTCCACTC  797

seq1  CACAGGCTCAATTCCTCTCAGTACTGAGACTCTCTTGAGAGGGCAGGAA-  845
       ||||||||||| | ||| |||||||| ||||||||||||||||||||| 
seq2  AACAGGCTCAATACTTCTTAGTACTGAAACTCTCTTGAGAGGGCAGGAAT  847

seq1  GAAC  849
      ||||
seq2  GAAC  851