BAC Information

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BAC

Clone NameB6Ng01-081F19
Chromosome14 (Build37)
Map Location 7,197,602 - 7,329,477
singlet/doubletdoublet
Overlap geneEG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964
Upstream geneLOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000
Downstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081F19.bB6Ng01-081F19.g
ACCDH896240DH896241
length1,2211,069
definitionDH896240|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F19, 5' end.DH896241|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,328,238 - 7,329,477)(7,197,602 - 7,198,677)
sequence
gaattcattcttttaatagctgagtagctcttcattgcttaaatgtatta
taatttctgtatccattcctcttttgactgacatcttggttctttccagc
tactggctatcataattaaggctgctataaacataatggaggtagtgcag
attcaaggcaatttatatactacatagcctataaatcaatgttgttactt
gacttgcaagggacacaacaagtcagactcatctttcatttggggacaat
aaaacttgagagtaactttcaggatttgtcaagggtaagacaagctcaag
tagaggacgaaaaggggaaggtggctgttatcagtctgcaatcagaggac
cccctagaaaggttgttattagttaagtgctatatgcctctacaaatcct
agtgtaaggggtcacattaaccatgcaattgaaaacattaccaaaccagg
aatatgctatgctgagcactcacagagacttatgaggagctgtcttaggt
tccttttacagcaggtaaaaatgacaaagagaccaaatatcctaactcca
caagatgataaagctgacaactgttgattgcactgagtatcagggagttt
agttttttgtgcatctacagattgtcatgcaacatttgcatcagggacaa
tacataaggaggtggttgctcagtggcatgacaaacaaccaagaagagcc
ataacctctacccctctgctctggatgcttagactaaaaagatttagttt
gtcaccatctgtcccaggactgctggcatcatttcttgcatacatttact
ctagcacttgtctaacttgggtacaaacccacagcccacagaaagaggct
ccactattagccactcactctatcaagaccaggatcttagaatcccagga
tcccagaatcccaggatttagtcacacaagaatcttagattctcacaggc
aacctgtctcccaggaactgcgaaacacccagaatctcggttaaaggatc
ccggaattttacactgtatcctagagcttaatgatcagacagatgcagct
ggactgagggtgtgagaagaatcgacatgttccacgcctgaagatcttgt
tgtctagcatttctagctctggcgagtgtgggcctccaagatgcattgtg
cactcaaattagataatactgattagttggatactcaaccttgcgtttct
ttagagaaagtaggtaggatt
gaattcactcggacaaccggatccttctacggcaaagcttttattgcttc
cacataaggaagaccccgaacccggaaaatggtgctgcttatatagcccg
cagcgtgacggttcagcacctgatgtggcgtgacagcacctgattagttg
ctcgcccatcaccccattactacgccccgagatgggcagtgactgggcgt
gaatttactcttgcacttgcgcataaggcttgtttactagttaggctcag
tggaagccggcgccatcttataatggcgattgctaatggcacggctctcc
acatttcctcctttttattttattaaaatttgaggctggtctaggcctct
gcagtcatgtccatctgctgtggttactgtcttaggtcattcctccaatg
tcacagcctttcctgtcataggttaaccctatcaccaccgggtcccatgt
cttaggttggtctgtacatgaggaaagttgcccatctctggataagaagt
tagactcagccgggcatggtggtgcacacttttaatcccagcactggaga
ggcagaggcaggccgatttctgagttggaggccagcctggtctacaaatt
gagttccaggacagccagaggtatatagaaaaaccctgtctcgaaaccac
aaccaccaccccaaaagaagaagttagactccagaaaaccaaagaacccc
attaaaaatggggtacagagctaaacaataattctcaactgaggaatact
gaatggctgagacacctaaaaaatgttcaacatccttaatcatcagggaa
atgcaaatcaaaacaaccgtagattccacctcggtcagaatggctaagat
caaaattcagttgacagcagatgctggcaaggttgtggagaaagaggaac
actcctccattgttgtgggatgcaagcttgtacaaccactctggaaatca
tttggtagtttcttcagaaaatgggacatagtactaccagagatccagca
tattacctcctgggcatatacccagaagacctccaactggtacaggtcac
atgctcccactatgttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7328238_7329477
seq2: B6Ng01-081F19.b_45_1265 (reverse)

seq1  AATCCTACCTCACTTCTCTAAGGAAACAGCAAGATTGAAGGTAATTCTAA  50
      ||||||||||   |||||||| ||||| ||||| ||||  |||  || ||
seq2  AATCCTACCTACTTTCTCTAAAGAAAC-GCAAGGTTGA--GTA--TCCAA  45

seq1  TTTTAAAATCAGTA-TATGTCATTTGAGTGCAAAGATGCATCTGTGA-GC  98
       |    |||||||| ||| | ||||||||||| | ||||||||  || ||
seq2  CT----AATCAGTATTATCTAATTTGAGTGCACA-ATGCATCTTGGAGGC  90

seq1  CCACA-TCTGCAGAGCTTAAGAATGCCTAGACAACAAGATC-TCA-GCGT  145
      ||||| ||  |||||||  ||||   ||||||||||||||| ||| ||||
seq2  CCACACTCGCCAGAGCT--AGAAATGCTAGACAACAAGATCTTCAGGCGT  138

seq1  TGAACATGTCCTGTATCTTCTTCACACCCTCAGTCCCAGCTGCATCCTTG  195
       |||||||||  |  ||||| ||||||||||||| |||||||||||  ||
seq2  GGAACATGTC--GATTCTTC-TCACACCCTCAGT-CCAGCTGCATC--TG  182

seq1  TCCTTGATCATTAAAGCTCTAAGGATACAGGTGTAAAATTCCGGGATCCT  245
      ||  |||||||| ||||||| |||||||| ||||||||||||||||||||
seq2  TC--TGATCATT-AAGCTCT-AGGATACA-GTGTAAAATTCCGGGATCCT  227

seq1  GTGACCCTGAGATTCTGGGTGTGTCGCAGTTCCTGGGAGACAGGTTGCCT  295
       | |||  |||||||||||||| |||||||||||||||||||||||||||
seq2  TTAACC--GAGATTCTGGGTGTTTCGCAGTTCCTGGGAGACAGGTTGCCT  275

seq1  GTGAGAATCTAAGATTCTTGTGTGACTAAATCCTGGGATTCTGGGATCCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAATCTAAGATTCTTGTGTGACTAAATCCTGGGATTCTGGGATCCT  325

seq1  GGGATTCTAAGATCCTGGTCTTGATAGAGTGAGTGGCTAATAGTGGAGCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCTAAGATCCTGGTCTTGATAGAGTGAGTGGCTAATAGTGGAGCC  375

seq1  TC-TTCTGTGGGCTGTGGGTTTGTACCCAAGTTAGACAAGTGCTAGAGTA  444
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGTGGGCTGTGGGTTTGTACCCAAGTTAGACAAGTGCTAGAGTA  425

seq1  AATGTATGCAAGAAATGATGCCAGCAGTCCTGGGACAGATGGTGACAAAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGCAAGAAATGATGCCAGCAGTCCTGGGACAGATGGTGACAAAC  475

seq1  TAAATCTTTTTAGTCTAAGCATCCAGAGCAGAGGGGTAGAGGTTATGGCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTTTTAGTCTAAGCATCCAGAGCAGAGGGGTAGAGGTTATGGCT  525

seq1  CTTCTTGGTTGTTTGTCATGCCACTGAGCAACCACCTCCTTATGTATTGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGTTGTTTGTCATGCCACTGAGCAACCACCTCCTTATGTATTGT  575

seq1  CCCTGATGCAAATGTTGCATGACAATCTGTAGATGCACAAAAAACTAAAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGATGCAAATGTTGCATGACAATCTGTAGATGCACAAAAAACTAAAC  625

seq1  TCCCTGATACTCAGTGCAATCAACAGTTGTCAGCTTTATCATCTTGTGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGATACTCAGTGCAATCAACAGTTGTCAGCTTTATCATCTTGTGGA  675

seq1  GTTAGGATATTTGGTCTCTTTGTCATTTTTACCTGCTGTAAAAGGAACCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGATATTTGGTCTCTTTGTCATTTTTACCTGCTGTAAAAGGAACCT  725

seq1  AAGACAGCTCCTCATAAGTCTCTGTGAGTGCTCAGCATAGCATATTCCTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCTCCTCATAAGTCTCTGTGAGTGCTCAGCATAGCATATTCCTG  775

seq1  GTTTGGTAATGTTTTCAATTGCATGGTTAATGTGACCCCTTACACTAGGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTAATGTTTTCAATTGCATGGTTAATGTGACCCCTTACACTAGGA  825

seq1  TTTGTAGAGGCATATAGCACTTAACTAATAACAACCTTTCTAGGGGGTCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGAGGCATATAGCACTTAACTAATAACAACCTTTCTAGGGGGTCC  875

seq1  TCTGATTGCAGACTGATAACAGCCACCTTCCCCTTTTCGTCCTCTACTTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTGCAGACTGATAACAGCCACCTTCCCCTTTTCGTCCTCTACTTG  925

seq1  AGCTTGTCTTACCCTTGACAAATCCTGAAAGTTACTCTCAAGTTTTATTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTCTTACCCTTGACAAATCCTGAAAGTTACTCTCAAGTTTTATTG  975

seq1  TCCCCAAATGAAAGATGAGTCTGACTTGTTGTGTCCCTTGCAAGTCAAGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAATGAAAGATGAGTCTGACTTGTTGTGTCCCTTGCAAGTCAAGT  1025

seq1  AACAACATTGATTTATAGGCTATGTAGTATATAAATTGCCTTGAATCTGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATTGATTTATAGGCTATGTAGTATATAAATTGCCTTGAATCTGC  1075

seq1  ACTACCTCCATTATGTTTATAGCAGCCTTAATTATGATAGCCAGTAGCTG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTCCATTATGTTTATAGCAGCCTTAATTATGATAGCCAGTAGCTG  1125

seq1  GAAAGAACCAAGATGTCAGTCAAAAGAGGAATGGATACAGAAATTATAAT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAACCAAGATGTCAGTCAAAAGAGGAATGGATACAGAAATTATAAT  1175

seq1  ACATTTAAGCAATGAAGAGCTACTCAGCTATTAAAAGAATGAATTC  1240
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAAGCAATGAAGAGCTACTCAGCTATTAAAAGAATGAATTC  1221

seq1: chr14_7197602_7198677
seq2: B6Ng01-081F19.g_68_1136

seq1  GAATTCACTCGGACAACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCGGACAACCGGATCCTTCTACGGCAAAGCTTTTATTGCTTC  50

seq1  CACATAAGGAAGACCCCGAACCCGGAAAATGGTGCTGCTTATATAGCCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGGAAGACCCCGAACCCGGAAAATGGTGCTGCTTATATAGCCCG  100

seq1  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGACGGTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTG  150

seq1  CTCGCCCATCACCCCATTACTACGCCCCGAGATGGGCAGTGACTGGGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCCATCACCCCATTACTACGCCCCGAGATGGGCAGTGACTGGGCGT  200

seq1  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACTCTTGCACTTGCGCATAAGGCTTGTTTACTAGTTAGGCTCAG  250

seq1  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCCGGCGCCATCTTATAATGGCGATTGCTAATGGCACGGCTCTCC  300

seq1  ACATTTCCTCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCTCCTTTTTATTTTATTAAAATTTGAGGCTGGTCTAGGCCTCT  350

seq1  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCATGTCCATCTGCTGTGGTTACTGTCTTAGGTCATTCCTCCAATG  400

seq1  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTTTCCTGTCATAGGTTAACCCTATCACCACCGGGTCCCATGT  450

seq1  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTTGGTCTGTACATGAGGAAAGTTGCCCATCTCTGGATAAGAAGT  500

seq1  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCAGCCGGGCATGGTGGTGCACACTTTTAATCCCAGCACTGGAGA  550

seq1  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGCCGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAATT  600

seq1  GAGTTCCAGGACAGCCAGAGGTATATAGAAAAACCCTGTCTCGAAACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGAGGTATATAGAAAAACCCTGTCTCGAAACCAC  650

seq1  AACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCACCCCAAAAGAAGAAGTTAGACTCCAGAAAACCAAAGAACCCC  700

seq1  ATTAAAAATGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATGGGGTACAGAGCTAAACAATAATTCTCAACTGAGGAATACT  750

seq1  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCAGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTGAGACACCTAAAAAATGTTCAACATCCTTAATCATCAGGGAA  800

seq1  ATGCAAATCAAAACAACCGTAGATTCCACCTCAGGTCAGAATGGCTAAGA  850
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGCAAATCAAAACAACCGTAGATTCCACCTC-GGTCAGAATGGCTAAGA  849

seq1  TCAAAATTTCAGTTGACAGCAGATGCTGGCAAGGTTGTGGAGAAAGAGGA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAA-TTCAGTTGACAGCAGATGCTGGCAAGGTTGTGGAGAAAGAGGA  898

seq1  ACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA  950
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  ACACTCCTCCATTGTT-GTGGGA-TGCAAGCTTGTACAACCACTCTGGAA  946

seq1  ATCAGTTTGGTAG-TTCCTCAGAAAATTGGACATAGTACTACCAGAGGAT  999
      |||| |||||||| ||| ||||||||| |||||||||||||||||| |||
seq2  ATCA-TTTGGTAGTTTCTTCAGAAAATGGGACATAGTACTACCAGA-GAT  994

seq1  CCAGCAATATTA-CTCCTGGGCATATACCCAGAAGACGCTCCAACTTGTA  1048
      ||||| |||||| |||||||||||||||||||||||| |||||||| |||
seq2  CCAGC-ATATTACCTCCTGGGCATATACCCAGAAGAC-CTCCAACTGGTA  1042

seq1  ACAAGGTCACATGCT-CCACTATGTTCAT  1076
         |||||||||||| |||||||||||||
seq2  --CAGGTCACATGCTCCCACTATGTTCAT  1069