BAC Information

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BAC

Clone NameB6Ng01-081G10
Chromosome14 (Build37)
Map Location 77,969,685 - 78,120,682
singlet/doubletdoublet
Overlap geneD230005D02Rik
Upstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, LOC100043755, LOC676171, EG629678
Downstream geneGm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081G10.bB6Ng01-081G10.g
ACCDH896268DH896269
length837816
definitionDH896268|Mus musculus domesticus DNA, BAC clone: B6Ng01-081G10, 5' end.DH896269|Mus musculus domesticus DNA, BAC clone: B6Ng01-081G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,119,842 - 78,120,682)(77,969,685 - 77,970,499)
sequence
gaattcctgtttgaacatccgtggcaccctcatcagaagcatttcaattt
cattggcggatatctgttaggaagacagagaagtcaattttgggaaagca
gcccaacagaaagccagaaatggacagacctaggtaagctctgctttcca
tggagacatttagttttatccgtggctgtcaggcaataaggggaaggact
gccttggatcaccctgtctgtaagcagctggcagggtgggtgtgggaaga
gggactaggatgtcctgagcttgcctttcccatggatagagagatgcctc
atgggcaggaccatgtcttaacagccttcccgacataaaagaaaggctca
gcacagttccccaccactgctgtgcccagtctcacctgcctagggcagaa
actttctgtagctcatcagaaagcccctaaggttggattatttgccattc
aaccgctttctcttcttagagatgataaaggtttaggaatgaagactaag
cctcagacttatagcagtaaaacgtcttgataggcagtcataaaaaaaaa
aaaaaaaggcaacaatgtctagacagatgtttcagttaattttttttcct
taacgccccccccccaggaacttcttgcattaatgattatttgttcttca
tttaaaacaaaattaactttgatctttcctaccacagtcgctatccttgt
tttactatgtttgcatcccaatctgggttcattgcaagaacctatacaat
aaaatggctaatttgggggcagatatctgtttgaaccccaatctgctatg
ttaagagttaatggacctacaaaggataattagtctc
gaattcctcatactttataagactgtctgctggcagttcccttcctcgct
aactcttagatttggctcatgtagtcaatcttttttttttttttctgggc
ttgggacccatcaagtcctgtgatttcccaagtgtatagttgtcctcagt
agctctcagcagcagaaagtgctcaagaagtgttgaatgaatgaagctag
tgagttcagctctcaccacattaaaatcctaaatgcaaaatcttcgaacc
acactgtgaaaagcaccatcttgtcaagtctgtacaaccagctacacagg
aagaagcttcagcaagtttgagggccacaaagtgagttcaaggttagcct
gggcaagttagggagtctcaaaacaaagagggaaaagaaagctgaaggct
gagctcggtgattgagtatttgcctggcatgcacaaggcttggttcaatc
ccagtaccaaaaatagagatgctcatctcaactgtaaaattctggactat
gatatgaacccacaagccagacttctgctttagcctttcatcctcccaca
caaaacaagaaacacacaccaataagttcctgcctcctgctgtccatgtc
tttggagatagagacaagaagactggacaaggccaaggtatgaagaacct
ttggatggcagtgtttcgatgagcagtgttttgaaaggatactcctctat
gtccttgattggaccctcctgtgttgcgttgtgaactggcttcctctttt
cccagggtagatactgtagctccttgtccaaagactccacagcatttgct
tctcactatgaggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78119842_78120682
seq2: B6Ng01-081G10.b_42_878 (reverse)

seq1  GAGACTAATTAT-CTTTGTAAGGTTCATTTAACTCTTAACAATAGCAGAT  49
      |||||||||||| |||||| |||| || |||||||||||| |||||||||
seq2  GAGACTAATTATCCTTTGT-AGGTCCA-TTAACTCTTAAC-ATAGCAGAT  47

seq1  TGGGGTTTCAAACAGAATATCTGCCCCCAAATTAGCCATTTTATTGTATA  99
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGGGG-TTCAAACAG-ATATCTGCCCCCAAATTAGCCATTTTATTGTATA  95

seq1  GGTTCTTGCAATGAACCCAGATTGGGATGCAAACATAGTAAAACAAGGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTGCAATGAACCCAGATTGGGATGCAAACATAGTAAAACAAGGAT  145

seq1  AGCGACTGTGGTAGGAAAGATCAAAGTTAATTTTGTTTTAAATGAAGAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGACTGTGGTAGGAAAGATCAAAGTTAATTTTGTTTTAAATGAAGAAC  195

seq1  AAATAAATCATTAATGCAAGAAGTTCCTGGGGGGGGGGCGTTAAGG-AAA  248
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAT-AATCATTAATGCAAGAAGTTCCTGGGGGGGGGGCGTTAAGGAAAA  244

seq1  AAAATTAACTGAAACATCTGTCTAGACATTGTTGCCTTTTTTTTTTTTTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAACTGAAACATCTGTCTAGACATTGTTGCCTTTTTTTTTTTTTT  294

seq1  TTATGACTGCCTATCAAGACGTTTTACTGCTATAAGTCTGAGGCTTAGTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTGCCTATCAAGACGTTTTACTGCTATAAGTCTGAGGCTTAGTC  344

seq1  TTCATTCCTAAACCTTTATCATCTCTAAGAAGAGAAAGCGGTTGAATGGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCCTAAACCTTTATCATCTCTAAGAAGAGAAAGCGGTTGAATGGC  394

seq1  AAATAATCCAACCTTAGGGGCTTTCTGATGAGCTACAGAAAGTTTCTGCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCCAACCTTAGGGGCTTTCTGATGAGCTACAGAAAGTTTCTGCC  444

seq1  CTAGGCAGGTGAGACTGGGCACAGCAGTGGTGGGGAACTGTGCTGAGCCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGGTGAGACTGGGCACAGCAGTGGTGGGGAACTGTGCTGAGCCT  494

seq1  TTCTTTTATGTCGGGAAGGCTGTTAAGACATGGTCCTGCCCATGAGGCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTATGTCGGGAAGGCTGTTAAGACATGGTCCTGCCCATGAGGCAT  544

seq1  CTCTCTATCCATGGGAAAGGCAAGCTCAGGACATCCTAGTCCCTCTTCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTATCCATGGGAAAGGCAAGCTCAGGACATCCTAGTCCCTCTTCCC  594

seq1  ACACCCACCCTGCCAGCTGCTTACAGACAGGGTGATCCAAGGCAGTCCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCACCCTGCCAGCTGCTTACAGACAGGGTGATCCAAGGCAGTCCTT  644

seq1  CCCCTTATTGCCTGACAGCCACGGATAAAACTAAATGTCTCCATGGAAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTATTGCCTGACAGCCACGGATAAAACTAAATGTCTCCATGGAAAG  694

seq1  CAGAGCTTACCTAGGTCTGTCCATTTCTGGCTTTCTGTTGGGCTGCTTTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTTACCTAGGTCTGTCCATTTCTGGCTTTCTGTTGGGCTGCTTTC  744

seq1  CCAAAATTGACTTCTCTGTCTTCCTAACAGATATCCGCCAATGAAATTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATTGACTTCTCTGTCTTCCTAACAGATATCCGCCAATGAAATTGA  794

seq1  AATGCTTCTGATGAGGCTGCCACGGATGTTCAAACAGGAATTC  841
      |||||||||||||||| ||||||||||||||||||||||||||
seq2  AATGCTTCTGATGAGGGTGCCACGGATGTTCAAACAGGAATTC  837

seq1: chr14_77969685_77970499
seq2: B6Ng01-081G10.g_71_886

seq1  GAATTCCTCATACTTTATAAGACTGTCTGCTGGCAGTTCCCTTCCTCGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATACTTTATAAGACTGTCTGCTGGCAGTTCCCTTCCTCGCT  50

seq1  AACTCTTAGATTTGGCTCATGTAGTCAATCTTTTTTTTTTTTTTCTGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTAGATTTGGCTCATGTAGTCAATCTTTTTTTTTTTTTTCTGGGC  100

seq1  TTGGGACCCATCAAGTCCTGTGATTTCCCAAGTGTATAGTTGTCCTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACCCATCAAGTCCTGTGATTTCCCAAGTGTATAGTTGTCCTCAGT  150

seq1  AGCTCTCAGCAGCAGAAAGTGCTCAAGAAGTGTTGAATGAATGAAGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCAGCAGCAGAAAGTGCTCAAGAAGTGTTGAATGAATGAAGCTAG  200

seq1  TGAGTTCAGCTCTCACCACATTAAAATCCTAAATGCAAAATCTTCGAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAGCTCTCACCACATTAAAATCCTAAATGCAAAATCTTCGAACC  250

seq1  ACACTGTGAAAAGCACCATCTTGTCAAGTCTGTACAACCAGCTACACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGAAAAGCACCATCTTGTCAAGTCTGTACAACCAGCTACACAGG  300

seq1  AAGAAGCTTCAGCAAGTTTGAGGGCCACAAAGTGAGTTCAAGGTTAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTTCAGCAAGTTTGAGGGCCACAAAGTGAGTTCAAGGTTAGCCT  350

seq1  GGGCAAGTTAGGGAGTCTCAAAACAAAGAGGGAAAAGAAAGCTGAAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGTTAGGGAGTCTCAAAACAAAGAGGGAAAAGAAAGCTGAAGGCT  400

seq1  GAGCTCGGTGATTGAGTATTTGCCTGGCATGCACAAGGCTTGGTTCAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCGGTGATTGAGTATTTGCCTGGCATGCACAAGGCTTGGTTCAATC  450

seq1  CCAGTACCAAAAATAGAGATGCTCATCTCAACTGTAAAATTCTGGACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCAAAAATAGAGATGCTCATCTCAACTGTAAAATTCTGGACTAT  500

seq1  GATATGAACCCACAAGCCAGACTTCTGCTTTAGCCTTTCATCCTCCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAACCCACAAGCCAGACTTCTGCTTTAGCCTTTCATCCTCCCACA  550

seq1  CAAAACAAGAAACACACACCAATAAGTTCCTGCCTCCTGCTGTCCATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAGAAACACACACCAATAAGTTCCTGCCTCCTGCTGTCCATGTC  600

seq1  TTTGGAGATAGAGACAAGAAGACTGGACAAGGCCAAGGTATGAAGAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGATAGAGACAAGAAGACTGGACAAGGCCAAGGTATGAAGAACCT  650

seq1  TTGGATGGCAGTGTTTCGATGAGCAGTGTTTTGAAAGGATACTCCTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGGCAGTGTTTCGATGAGCAGTGTTTTGAAAGGATACTCCTCTAT  700

seq1  GTCCTTGATTGGACCCTCCTGTGTTGCGTTGTGAACTGGCTTCCTCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGATTGGACCCTCCTGTGTTGCGTTGTGAACTGGCTTCCTCTTTT  750

seq1  CCCAGGGTAGATACTGTAGCTCCTTGTCCAAGGACTCCACAGCATTTGC-  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  CCCAGGGTAGATACTGTAGCTCCTTGTCCAAAGACTCCACAGCATTTGCT  800

seq1  TCTCACTATGAGGCAT  815
      ||||||||||||||||
seq2  TCTCACTATGAGGCAT  816