BAC Information

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BAC

Clone NameB6Ng01-081H07
Chromosome14 (Build37)
Map Location 39,980,949 - 39,982,119
singlet/doubletsinglet
Overlap geneNrg3
Upstream geneLOC100041521
Downstream geneLOC100040439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081H07.bB6Ng01-081H07.g
ACCDH896304DH896305
length1,160335
definitionDH896304|Mus musculus domesticus DNA, BAC clone: B6Ng01-081H07, 5' end.DH896305|Mus musculus domesticus DNA, BAC clone: B6Ng01-081H07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagctatatatgattttataaaattaatattttccctagaata
ttaagtcaagtttaaatggcaatctcaggtcattacctgcatacatacag
cagtatagaatatggtctttattgctacaaacaaacggaacttccttgat
ttatactaagcacgtgacagtatcagacacaggttttattaccatggtga
aagtgaaaatgacattttatattattatagaagtacttttaaatcagata
ttttctgaaattttccctgtacacaaaactgagaatttcttatttgagct
gctgtaacaagttcagcaaagcaatcagaagatgaaaaaagaattattca
cacatgtaactatctactttatggtcctcagatcagtaacattctgcctt
tcaggctcatttgggaatgtgctgagaaataaaaataatgggttcctgac
tagagaatagacagagtatccagagatgatagtaaacatactataagcta
taagaaaatctctcaccactgtattctgtagtgatatagttctgttagtt
taaaaaactgctttaagtctagtaaaatggttcacccctgcaaccccagg
gctcagggatttgataggcttgaaaatctgaattttaaggctacatattc
agactctgtcacaaacaaacaaacaaacaaacaaacaaacaaacaaacaa
acaaaaagtaccccatattgttttaaagatgggaatgtgggccaaggaga
ttcttgattgctcttgtcatggattggagttcctttctcctggttgactt
tttaccaacaaaggataatttttcccccaaagaacattggcttgttggaa
gaagcattgagtttgtactaggaaaatagacaggaacttgaggatgagaa
attgaatcttaagaaaactgtggaaattgagactgtcttctagatctaac
tacattactttggccagaactgttgggctagactttgtcataaaagtaga
agttccatttgaaagaaatgtagatatttgtagaagcttaggcatagacc
attatttatcacagttgaagaatgcatattttttgaaggattgcccagaa
ttccagagtatttagtctagaaaaaaataattctatgttatatgttacct
cacagtttta
caacagaatcaactaacatggatccttgggggctcccagagtctgaggca
tcaactaaagaatgtacatgggatggatataggcctcctgtacatatagc
aaatgtgcagctgggttttcatgtggacctcccaacaatgggagaggtgg
ttcggggtgtttaccctgatactgttgcctacctgtggatcctgcttcca
taactgggctgccttgtctggtctctttgagagaggatgtgcctagttca
gcagtgacttgaggtgtcatggtgggttggtagccagggaatatttgccc
cttttcatagataatggggatgggagggtgggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_39980949_39982119
seq2: B6Ng01-081H07.b_43_1202 (reverse)

seq1  TAAAACTCTGTAGGTAACATATATACATAGGAATTATAATTTTTCTATGA  50
      ||||||| || |||||||||||| ||||| |||||||  |||||||| ||
seq2  TAAAACTGTG-AGGTAACATATA-ACATA-GAATTAT-TTTTTTCTA-GA  45

seq1  CTAAATACCTCTGGATTCTTTGGGCAATCTTTCAAAAAAATATGCATTTC  100
      ||||||| ||||||| | | ||||||||| ||| |||||||||||| |||
seq2  CTAAATA-CTCTGGAAT-TCTGGGCAATCCTTC-AAAAAATATGCA-TTC  91

seq1  TTC-ACTGTGATAAAT-ATGGTCTATGCCTTAGCTCTAACAAATATCTTC  148
      ||| |||||||||||| ||||||||||||| ||||   |||||||||| |
seq2  TTCAACTGTGATAAATAATGGTCTATGCCTAAGCTTCTACAAATATCTAC  141

seq1  ATTTCCTTTCAAATGGAACTTCTACTTTTATGACAAAGTCTTAGCCCAAC  198
      |||| ||||||||||||||||||||||||||||||||||| |||||||| 
seq2  ATTT-CTTTCAAATGGAACTTCTACTTTTATGACAAAGTC-TAGCCCAA-  188

seq1  CAGTTCTGGCCAAAGTAATGTAGTTAGATCTAGAAGACAGTCTTCAATTT  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGTTCTGGCCAAAGTAATGTAGTTAGATCTAGAAGACAGTC-TCAATTT  237

seq1  CCACAGTTTTCTTAAGATTCAATTTCTCATCCTCAAGTTCCTGTCTATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTTTCTTAAGATTCAATTTCTCATCCTCAAGTTCCTGTCTATTT  287

seq1  TCCTAGTACAAACTCAATGCTTCTTCCAACAAGCCAATGTTCTTTGGGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTACAAACTCAATGCTTCTTCCAACAAGCCAATGTTCTTTGGGGG  337

seq1  AAAAATTATCCTTTGTTGGTAAAAAGTCAACCAGGAGAAAGGAACTCCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTATCCTTTGTTGGTAAAAAGTCAACCAGGAGAAAGGAACTCCAA  387

seq1  TCCATGACAAGAGCAATCAAGAATCTCCTTGGCCCACATTCCCATCTTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGACAAGAGCAATCAAGAATCTCCTTGGCCCACATTCCCATCTTTA  437

seq1  AAACAATATGGGGTACTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATATGGGGTACTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG  487

seq1  TTTGTTTGTTTGTGACAGAGTCTGAATATGTAGCCTTAAAATTCAGATTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTGACAGAGTCTGAATATGTAGCCTTAAAATTCAGATTT  537

seq1  TCAAGCCTATCAAATCCCTGAGCCCTGGGGTTGCAGGGGTGAACCATTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTATCAAATCCCTGAGCCCTGGGGTTGCAGGGGTGAACCATTTT  587

seq1  ACTAGACTTAAAGCAGTTTTTTAAACTAACAGAACTATATCACTACAGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACTTAAAGCAGTTTTTTAAACTAACAGAACTATATCACTACAGAA  637

seq1  TACAGTGGTGAGAGATTTTCTTATAGCTTATAGTATGTTTACTATCATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGTGAGAGATTTTCTTATAGCTTATAGTATGTTTACTATCATCT  687

seq1  CTGGATACTCTGTCTATTCTCTAGTCAGGAACCCATTATTTTTATTTCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATACTCTGTCTATTCTCTAGTCAGGAACCCATTATTTTTATTTCTC  737

seq1  AGCACATTCCCAAATGAGCCTGAAAGGCAGAATGTTACTGATCTGAGGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTCCCAAATGAGCCTGAAAGGCAGAATGTTACTGATCTGAGGAC  787

seq1  CATAAAGTAGATAGTTACATGTGTGAATAATTCTTTTTTCATCTTCTGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTAGATAGTTACATGTGTGAATAATTCTTTTTTCATCTTCTGAT  837

seq1  TGCTTTGCTGAACTTGTTACAGCAGCTCAAATAAGAAATTCTCAGTTTTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGCTGAACTTGTTACAGCAGCTCAAATAAGAAATTCTCAGTTTTG  887

seq1  TGTACAGGGAAAATTTCAGAAAATATCTGATTTAAAAGTACTTCTATAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGGGAAAATTTCAGAAAATATCTGATTTAAAAGTACTTCTATAAT  937

seq1  AATATAAAATGTCATTTTCACTTTCACCATGGTAATAAAACCTGTGTCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAATGTCATTTTCACTTTCACCATGGTAATAAAACCTGTGTCTG  987

seq1  ATACTGTCACGTGCTTAGTATAAATCAAGGAAGTTCCGTTTGTTTGTAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCACGTGCTTAGTATAAATCAAGGAAGTTCCGTTTGTTTGTAGC  1037

seq1  AATAAAGACCATATTCTATACTGCTGTATGTATGCAGGTAATGACCTGAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGACCATATTCTATACTGCTGTATGTATGCAGGTAATGACCTGAG  1087

seq1  ATTGCCATTTAAACTTGACTTAATATTCTAGGGAAAATATTAATTTTATA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCATTTAAACTTGACTTAATATTCTAGGGAAAATATTAATTTTATA  1137

seq1  AAATCATATATAGCTCTGAATTC  1171
      |||||||||||||||||||||||
seq2  AAATCATATATAGCTCTGAATTC  1160