BAC Information

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BAC

Clone NameB6Ng01-081N16
Chromosome14 (Build37)
Map Location 20,030,997 - 20,031,561
singlet/doubletsinglet
Overlap genenone
Upstream geneNr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963, Ube2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344
Downstream geneLOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081N16.bB6Ng01-081N16.g
ACCDH896581DH896582
length1,237613
definitionDH896581|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N16, 5' end.DH896582|Mus musculus domesticus DNA, BAC clone: B6Ng01-081N16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaataaaaccccaagtgaggcaa
cgctggagatagaaaccctaggaaagaaatctggaaccatagatttgagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactaaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
acccgcaaacatcttcaacaaaattattgaagaaaacttccaaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataaaaatcagaacatcaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatgtagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaaccaata
caaggacgggaaccacgccctagaaaaaacaaggagataatccctcacaa
acctaaaagaagacagccacagacagattgccaactttaacacaaaataa
cagagcaacaattacctttcttaatatctcctaattcatggactccaatc
cccataaagactagactaaccgactggcttaccaacagaccaacatttct
gctgctccgggaacattaagaaaggaacgaacctactctcgagtgaaagg
gctgtaaacatttttccacgacacaatgggtctgtga
gaattccacttgggcctgcttagtttcctggggatggggaaagagaatga
ggagaggccccaagaggtaatccactacagagctaggaatagactggggc
atttgatagagagggaaggagggagagtggagatctaaaggtcttttatc
ttcttctctgctctacttgtttctctggcagctttggctgtcaagttcat
ggagaatgcctgcaagagttggaaggtgacatgatgggagtggagaggac
agttagagaatatctgagttttttgctagagatggggcagagaagggaga
ggcaggttgtctcctacagagatagggataagaatttgtgattggatttg
gagtagaagtagtctgacaagtgaagagaggcttcacgttcctctggtca
gagggggctgggaattcccagggaatgcctgcctgctgaagttggaggct
gggatatatcagtgagttggggttagaaagtgtagagggcaaggtctgtg
tggtccactggagataggattggaggggacaggctgttgtggtggtcagt
cctaatttcagatgatctttagttgacgttcatgactacactcatatttc
ctgaaggagccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20030997_20031561
seq2: B6Ng01-081N16.g_121_684 (reverse)

seq1  CTGGCTCCTTCAGGAAATTTGTGTGTAGTCATGAACGTCAACTAAAAGAT  50
      |||||||||||||||||| || ||||||||||||||||||||| ||||||
seq2  CTGGCTCCTTCAGGAAATATGAGTGTAGTCATGAACGTCAACT-AAAGAT  49

seq1  CATCTGAAATTAGGACTGACCACCACAACAGCCTGTCCCCTCCAATCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAAATTAGGACTGACCACCACAACAGCCTGTCCCCTCCAATCCTA  99

seq1  TCTCCAGTGGACCACACAGACCTTGCCCTCTACACTTTCTAACCCCAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGTGGACCACACAGACCTTGCCCTCTACACTTTCTAACCCCAACT  149

seq1  CACTGATATATCCCAGCCTCCAACTTCAGCAGGCAGGCATTCCCTGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATATATCCCAGCCTCCAACTTCAGCAGGCAGGCATTCCCTGGGAA  199

seq1  TTCCCAGCCCCCTCTGACCAGAGGAACGTGAAGCCTCTCTTCACTTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCCCCCTCTGACCAGAGGAACGTGAAGCCTCTCTTCACTTGTCA  249

seq1  GACTACTTCTACTCCAAATCCAATCACAAATTCTTATCCCTATCTCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACTTCTACTCCAAATCCAATCACAAATTCTTATCCCTATCTCTGTA  299

seq1  GGAGACAACCTGCCTCTCCCTTCTCTGCCCCATCTCTAGCAAAAAACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAACCTGCCTCTCCCTTCTCTGCCCCATCTCTAGCAAAAAACTCA  349

seq1  GATATTCTCTAACTGTCCTCTCCACTCCCATCATGTCACCTTCCAACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTCTAACTGTCCTCTCCACTCCCATCATGTCACCTTCCAACTCT  399

seq1  TGCAGGCATTCTCCATGAACTTGACAGCCAAAGCTGCCAGAGAAACAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCATTCTCCATGAACTTGACAGCCAAAGCTGCCAGAGAAACAAGT  449

seq1  AGAGCAGAGAAGAAGATAAAAGACCTTTAGATCTCCACTCTCCCTCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGAAGAAGATAAAAGACCTTTAGATCTCCACTCTCCCTCCTTC  499

seq1  CCTCTCTATCAAATGCCCCAGTCTATTCCTAGCTCTGTAGTGGATTACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTATCAAATGCCCCAGTCTATTCCTAGCTCTGTAGTGGATTACCT  549

seq1  CTTGGGGCCTCTCCT  565
      |||||||||||||||
seq2  CTTGGGGCCTCTCCT  564