BAC Information

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BAC

Clone NameB6Ng01-082A07
Chromosome14 (Build37)
Map Location 10,527,582 - 10,528,786
singlet/doubletsinglet
Overlap geneFhit
Upstream geneLOC100041948
Downstream geneLOC100042415
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082A07.bB6Ng01-082A07.g
ACCDH896700DH896701
length1,1821,168
definitionDH896700|Mus musculus domesticus DNA, BAC clone: B6Ng01-082A07, 5' end.DH896701|Mus musculus domesticus DNA, BAC clone: B6Ng01-082A07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatattattaagaaatcatattcatacttagatactatgattgtt
acagcaaggccatcacagtaaacgtgttaatagtatttaagcataaggtc
cttctccctgtgaagtaagaatcattgtgcgccacattagctgggttagt
cactttagagccgctgtctggtagagcgttttaactaagccttgtcagtg
ttaatcctaatgtctgatgctgggatgtgccttgtattactttatgtaac
tgaagaataggaagcctttatgttggattattggctgaagtaatgacctc
ctcctggaaccaggcctgggatacaatgaagtatcaaatgagattctggg
tcagctcctccacaggacttaaaggaagccagctcttttgttaagattca
ttcactcactaacaggatgcttttgcccctggccatccacttaaggctcc
ttcagtaagaagtgtctccattcacaggctaacttgccagccgagcacac
aggcagtggtagacaatagttaacaatgtatcaagcccttcctcaatgct
gttctctctggactctgatctagctgtgtgagcccgaggctatgtagctt
agggctagaaagaagccagccaagaaggctcagtgccctgttctctgctc
ttgcggctttcagtggctcttcttgcatgttttacactccagtgctctgt
gtaaggcatcatatcatatacatataccactgtagaatagctcatccatt
ctacaactctttactaggcacagataacaaacccttacatcaatgagaaa
atctgagatagtggcatttggtacagaattaaacaagaaacgattgtggg
atggaaagcatatagaataagaactggtttcatacaagaaagtcagggaa
ggcctggccaagggttaaagtctgagctgggacagaaactagaatcctcc
aatcacaagagagagggagcagtctaggcagagacactactgtggtctaa
ggctgggacagttggtatttcaaaaataggaaagtcatgtgggtatagtt
tagcgagtgagcaagtataaaaagcatgaagggttcagatcatgttcagc
cactgtatgccaaatgcaacagagctgttgtcatgtgataacctgaatcg
agagggtggtgtgcttgcctgttcgtgaaagc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaatacccaaggagctaaagggatctcaccctatt
agtggaacaacattatgaactaaccagtaccctgagcttttgactctagc
tgctatatgtatcaaagattggcttagtcggcatcctgaagaaaggccaa
ttgaccgcgaacttttgtgtgccggtactggggaacgccaggcaaagtgg
ggggaagtggtgtgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_10527582_10528786
seq2: B6Ng01-082A07.b_48_1229

seq1  GAATTCATATTATTAAGAAATCATATTCATACTTAGATACTATGATTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTATTAAGAAATCATATTCATACTTAGATACTATGATTGTT  50

seq1  ACAGCAAGGCCATCACAGTAAACGTGTTAATAGTATTTAAGCATAAGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGGCCATCACAGTAAACGTGTTAATAGTATTTAAGCATAAGGTC  100

seq1  CTTCTCCCTGTGAAGTAAGAATCATTGTGCGCCACATTAGCTGGGTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCCTGTGAAGTAAGAATCATTGTGCGCCACATTAGCTGGGTTAGT  150

seq1  CACTTTAGAGCCGCTGTCTGGTAGAGCGTTTTAACTAAGCCTTGTCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTAGAGCCGCTGTCTGGTAGAGCGTTTTAACTAAGCCTTGTCAGTG  200

seq1  TTAATCCTAATGTCTGATGCTGGGATGTGCCTTGTATTACTTTATGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTAATGTCTGATGCTGGGATGTGCCTTGTATTACTTTATGTAAC  250

seq1  TGAAGAATAGGAAGCCTTTATGTTGGATTATTGGCTGAAGTAATGACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATAGGAAGCCTTTATGTTGGATTATTGGCTGAAGTAATGACCTC  300

seq1  CTCCTGGAACCAGGCCTGGGATACAATGAAGTATCAAATGAGATTCTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGAACCAGGCCTGGGATACAATGAAGTATCAAATGAGATTCTGGG  350

seq1  TCAGCTCCTCCACAGGACTTAAAGGAAGCCAGCTCTTTTGTTAAGATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTCCACAGGACTTAAAGGAAGCCAGCTCTTTTGTTAAGATTCA  400

seq1  TTCACTCACTAACAGGATGCTTTTGCCCCTGGCCATCCACTTAAGGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCACTAACAGGATGCTTTTGCCCCTGGCCATCCACTTAAGGCTCC  450

seq1  TTCAGTAAGAAGTGTCTCCATTCACAGGCTAACTTGCCAGCCGAGCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAAGAAGTGTCTCCATTCACAGGCTAACTTGCCAGCCGAGCACAC  500

seq1  AGGCAGTGGTAGACAATAGTTAACAATGTATCAAGCCCTTCCTCAATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTGGTAGACAATAGTTAACAATGTATCAAGCCCTTCCTCAATGCT  550

seq1  GTTCTCTCTGGACTCTGATCTAGCTGTGTGAGCCCGAGGCTATGTAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCTGGACTCTGATCTAGCTGTGTGAGCCCGAGGCTATGTAGCTT  600

seq1  AGGGCTAGAAAGAAGCCAGCCAAGAAGGCTCAGTGCCCTGTTCTCTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTAGAAAGAAGCCAGCCAAGAAGGCTCAGTGCCCTGTTCTCTGCTC  650

seq1  TTGCGGCTTTCAGTGGCTCTTCTTGCATGTTTTACACTCCAGTGCTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGGCTTTCAGTGGCTCTTCTTGCATGTTTTACACTCCAGTGCTCTGT  700

seq1  GTAAGGCATCATATCATATACATATACCACTGTAGAATAGCTCATCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCATCATATCATATACATATACCACTGTAGAATAGCTCATCCATT  750

seq1  CTACAACTCTTTACTAGGCACAGATAACAAACCCTTACATCAATGAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACTCTTTACTAGGCACAGATAACAAACCCTTACATCAATGAGAAA  800

seq1  ATCTGAGATAGTGGCATTTGGTACAGAATTAAACAAGAAACGATTGTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGATAGTGGCATTTGGTACAGAATTAAACAAGAAACGATTGTGGG  850

seq1  ATGGAAAGCATATAGAATAAGAACTGGTTTCATACAAGAAAGTCAGGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGCATATAGAATAAGAACTGGTTTCATACAAGAAAGTCAGGGAA  900

seq1  GGCCTGGCCAAGGGTTAAAGTCTGAGCTGGGACAGAAACTAGAATCCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGCCAAGGGTTAAAGTCTGAGCTGGGACAGAAACTAGAATCCTCC  950

seq1  AATCACAAGAGAGAGGGAGCAAGTCTAGGCAGAGGACACTACTGTTGGTC  1000
      |||||||||||||||||||| |||||||||||| |||||||||| |||| 
seq2  AATCACAAGAGAGAGGGAGC-AGTCTAGGCAGA-GACACTACTG-TGGT-  996

seq1  CTAAGGCTGGGGACAAGTTTGGTATTTCCAAAAATAGGAAAAGTCAGTGT  1050
      |||||||| ||||||   ||||||||| |||||||||| ||||||| |||
seq2  CTAAGGCT-GGGACA--GTTGGTATTT-CAAAAATAGG-AAAGTCA-TGT  1040

seq1  GGGTATAGTTTAGCGAGTGAGCAAAGTAT-AAAAGCATG-AGGGGTCAGA  1098
      |||||||||||||||||||||| |||||| ||||||||| |||| |||||
seq2  GGGTATAGTTTAGCGAGTGAGC-AAGTATAAAAAGCATGAAGGGTTCAGA  1089

seq1  TCATG-TCAGCCACTGTAATGCAAAATGCAAACAAGAGGCTTGGTTGTCA  1147
      ||||| ||||||||||| |||| ||||||||   ||| |||  |||||||
seq2  TCATGTTCAGCCACTGT-ATGCCAAATGCAA--CAGA-GCT--GTTGTCA  1133

seq1  TGGTGAGATAAACTGAATCGAGAAGTGTGTGTGTGTGCTTGCCCTTGTTC  1197
         || ||||| |||||||||||   | ||| |||||||||||  |||||
seq2  ---TGTGATAACCTGAATCGAGA---GGGTG-GTGTGCTTGCC--TGTTC  1174

seq1  GTGAAAGC  1205
      ||||||||
seq2  GTGAAAGC  1182