BAC Information

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BAC

Clone NameB6Ng01-082H07
Chromosome14 (Build37)
Map Location 36,581,866 - 36,741,012
singlet/doubletdoublet
Overlap gene4930596D02Rik, LOC100040277
Upstream geneLOC100041341, Grid1
Downstream geneLOC665933, 4930474N05Rik, Gcap14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082H07.bB6Ng01-082H07.g
ACCDH897005DH897006
length9191,022
definitionDH897005|Mus musculus domesticus DNA, BAC clone: B6Ng01-082H07, 5' end.DH897006|Mus musculus domesticus DNA, BAC clone: B6Ng01-082H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,581,866 - 36,582,709)(36,740,366 - 36,741,012)
sequence
gaattccttcactcagcctcaaatgaatgttcatctactttgtggctgct
gctgctgctttttttttttttttttttttttttttttttgctgaaaacag
aacccaccttcttttgcattcctatgtggactgaaaaatagcagcttcag
gttcctaacccttctaggaatcctctacaccttcagcagcaaggggggcc
tgctggaaccagccttatggattgaacagccactgagtttgaggctcttg
tagtgttaaggcagctattgttggactatttgcactacatcaaaaaatcc
aattttacaaacctcattataatatgtattcaatttattggctctgttcc
tttaaaggaatggttcttaatcttccttatgttacaaacccttttgttcc
tcatattctggtgatgcccaaccataaaattattttattgctacttcata
cctgaaatttgcaactgttatgaattgtaatgtaaatatctgattgtggg
atatctgatatgtaatccctatgaaatgattgtgtgaccttaaggggcat
cacccacaggttgggaatcactgttcaagagagccttaaattgttattta
tatacagaattatatttacctttaataaattcaaaatgaaaatgaaattg
actacccaatagaaaacaaaaaagggatcaaataagaaccttattgtagt
tgcttgtattctaattttaactatgtttccggaaaaaaaaaaaaaaaaaa
aaaaaaaagccgggatgcagcatctgtgaacctgcccccaattggttcct
gattggtaaataaagatgctatcatccaatagatggagaggacagacaga
tgggattttagattcctgaacttggggatgggaggaggaggagaacaagt
aggaggtggaggaagagga
gaattcctcaggctacagcctaagaatcaagccaagtcttggtgccttca
ctaccagaaaattgataccattaagtcagtcctgagggagacatgtcatt
ttattattatttatttaattttggttttgataattttgttttatatgttt
gttatatattctaggctggcctcaattctcttttctcagcattccaaaca
cacaaattaccaacacgtgctactgtgcctggcaaaaagaaaatttatca
cttcagtggccaggattaagaaagaagaaaggtctcaaatcatttacctg
acctttggctttatgagagtggagaaagaagagaaaaataaaccaaaata
agaagaaacaagaaaataataaagactgtactggaaaccaatgaaataga
atacataaaagcaaaggagaaatattactgaactcaggagctctttcttg
gagaatatgaacaaaatggataaaacattacctaagctgtcaaaaatgaa
agcagaggaagcagaaattatcaaaatcaaacctatagagataaatatca
ctactggtcatatcagactcaaaattttcttaaacgatattgtttttagg
gacaaattatccaagagcacaaagggtagtgtggataggcatgtagtaat
tatataacttatactttaattttaaatattgtgccaaaacaaatttaggt
atagctgacagcactgtggagtataagtattattcaaagcttttcaaatc
ttcagaaaatagagaaagaaatagagaatcattattgtctaattatataa
tatacagaaatatgagaataaaaccaagtgacaatgatggaaaatgttta
aatatatatttgcacatgaagtccaacaacaggaataatagtagcatagc
ataacccaaatggatagatgtcagaatgcaaagttaaaccaacacccaaa
atccagttaaagccctatgccacactatgaaagaagagactatgatgaaa
acagtagacagatcatcactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36581866_36582709
seq2: B6Ng01-082H07.b_124_965

seq1  TTTTTTTTTTTTGCTGAGAACAGAACCCACCTTCTTTTGCATTCCTATGT  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTGCTGAAAACAGAACCCACCTTCTTTTGCATTCCTATGT  50

seq1  GGACTGAAGAATAGCAGCTTCAGGTTCCTAACCCTTCTAGGAATCCTCTA  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAAAAATAGCAGCTTCAGGTTCCTAACCCTTCTAGGAATCCTCTA  100

seq1  CACCTTCAGCAGCAAGGTGGGCCTGCTGGAACCAGCCTTATGGATTGAAC  150
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CACCTTCAGCAGCAAGGGGGGCCTGCTGGAACCAGCCTTATGGATTGAAC  150

seq1  AGCCACTGAGTTTGAGGCTCTTGTAGTGTTAAGGCAGCTATTGTTGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTGAGTTTGAGGCTCTTGTAGTGTTAAGGCAGCTATTGTTGGACT  200

seq1  ATTTGCACTACATCAGAAAATCCAATTTTACAAACCTCATTATAATATGT  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTTGCACTACATCAAAAAATCCAATTTTACAAACCTCATTATAATATGT  250

seq1  ATTCAATTTATTGGCTCTGTTCCTTTAAAGGAATGGTTCTTAATCTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTTATTGGCTCTGTTCCTTTAAAGGAATGGTTCTTAATCTTCCT  300

seq1  TATGTTACAAACCCTTTTGTTCCTCATATTCTGGTGATGCCCAACCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTACAAACCCTTTTGTTCCTCATATTCTGGTGATGCCCAACCATAA  350

seq1  AATTATTTTATTGCTACTTCATACCTGAAATTTGCAACTGTTATGAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTTATTGCTACTTCATACCTGAAATTTGCAACTGTTATGAATTG  400

seq1  TAATGTAGATATCTGATTGTGGGATATCTGATATGTAATCCCTATGAAAT  450
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAAATATCTGATTGTGGGATATCTGATATGTAATCCCTATGAAAT  450

seq1  GATTGTGTGACCTTAAGGGGCATCACCCACAGGTTGGGAATCACTGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGTGACCTTAAGGGGCATCACCCACAGGTTGGGAATCACTGTTCA  500

seq1  AGAGAGCCTTAAATTGTTATTTATATACAGAATTATATTTACCTTTAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCCTTAAATTGTTATTTATATACAGAATTATATTTACCTTTAATA  550

seq1  AATTCAAAATGAAAATGAAATTGACTACCCAATAGAAAACAAAAAAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAAATGAAAATGAAATTGACTACCCAATAGAAAACAAAAAAGGGA  600

seq1  TCAAATAAGAACCTTATTGTAGTTGCTTGTATTCTAATTTTAACTATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAAGAACCTTATTGTAGTTGCTTGTATTCTAATTTTAACTATGTT  650

seq1  TCCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCGGATGCAGCATCT  700
      |||||  ||||||||||||||||||||||||||| | |||||||||||||
seq2  TCCGG--AAAAAAAAAAAAAAAAAAAAAAAAAAGCCGGGATGCAGCATCT  698

seq1  GGGAACCTGCCCCCAATTGGTT-CTGATTGGTAAATAAAGATGCTATCAT  749
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGAACCTGCCCCCAATTGGTTCCTGATTGGTAAATAAAGATGCTATCAT  748

seq1  CCAATAGATGGAGAGGACAGACAGATGGGATTTTAGGATTCCTGAACTTG  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCAATAGATGGAGAGGACAGACAGATGGGATTTTA-GATTCCTGAACTTG  797

seq1  GGAATGGGAGGAGGAGGAGAACAAGTAGGAGGTGGAGGAAGAGGA  844
      || ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGGAGGAGGAGGAGAACAAGTAGGAGGTGGAGGAAGAGGA  842

seq1: chr14_36740366_36741012
seq2: B6Ng01-082H07.g_69_715 (reverse)

seq1  ACTACATGCCTATCCACACTACCCTTTGTGCTCTTGGATAATTTGTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATGCCTATCCACACTACCCTTTGTGCTCTTGGATAATTTGTCCCT  50

seq1  AAAAACAATATCGTTTAAGAAAATTTTGAGTCTGATATGACCAGTAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATATCGTTTAAGAAAATTTTGAGTCTGATATGACCAGTAGTGA  100

seq1  TATTTATCTCTATAGGTTTGATTTTGATAATTTCTGCTTCCTCTGCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCTCTATAGGTTTGATTTTGATAATTTCTGCTTCCTCTGCTTTC  150

seq1  ATTTTTGACAGCTTAGGTAATGTTTTATCCATTTTGTTCATATTCTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGACAGCTTAGGTAATGTTTTATCCATTTTGTTCATATTCTCCAA  200

seq1  GAAAGAGCTCCTGAGTTCAGTAATATTTCTCCTTTGCTTTTATGTATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCTCCTGAGTTCAGTAATATTTCTCCTTTGCTTTTATGTATTCT  250

seq1  ATTTCATTGGTTTCCAGTACAGTCTTTATTATTTTCTTGTTTCTTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTGGTTTCCAGTACAGTCTTTATTATTTTCTTGTTTCTTCTTAT  300

seq1  TTTGGTTTATTTTTCTCTTCTTTCTCCACTCTCATAAAGCCAAAGGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTATTTTTCTCTTCTTTCTCCACTCTCATAAAGCCAAAGGTCAG  350

seq1  GTAAATGATTTGAGACCTTTCTTCTTTCTTAATCCTGGCCACTGAAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGATTTGAGACCTTTCTTCTTTCTTAATCCTGGCCACTGAAGTGA  400

seq1  TAAATTTTCTTTTTGCCAGGCACAGTAGCACGTGTTGGTAATTTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTCTTTTTGCCAGGCACAGTAGCACGTGTTGGTAATTTGTGTGT  450

seq1  TTGGAATGCTGAGAAAAGAGAATTGAGGCCAGCCTAGAATATATAACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATGCTGAGAAAAGAGAATTGAGGCCAGCCTAGAATATATAACAAA  500

seq1  CATATAAAACAAAATTATCAAAACCAAAATTAAATAAATAATAATAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAACAAAATTATCAAAACCAAAATTAAATAAATAATAATAAAAT  550

seq1  GACATGTCTCCCTCAGGACTGACTTAATGGTATCAATTTTCTGGTAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTCTCCCTCAGGACTGACTTAATGGTATCAATTTTCTGGTAGTGA  600

seq1  AGGCACCAAGACTTGGCTTGATTCTTAGGCTGTAGCCTGAGGAATTC  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACCAAGACTTGGCTTGATTCTTAGGCTGTAGCCTGAGGAATTC  647