BAC Information

Click to search

BAC

Clone NameB6Ng01-083B22
Chromosome14 (Build37)
Map Location 86,581,988 - 86,745,831
singlet/doubletdoublet
Overlap geneLOC100043301, EG629815, LOC100043306, LOC100043778
Upstream geneLOC668603
Downstream geneLOC100043310, LOC100043311, Diap3, EG665324
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083B22.bB6Ng01-083B22.g
ACCDH897472DH897473
length8451,023
definitionDH897472|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B22, 5' end.DH897473|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,745,281 - 86,745,831)(86,581,988 - 86,583,024)
sequence
gaattctacaaagaaagaagggaaatggagacaagttattaaatagtgtg
tatgtaaaatggctcctgaatatcagtagtccagggataatgatacaaag
gaggaagcacatgggtgctgctcaccctcttctttttttttttttttttt
tttttttttttttttctttccattttttattaggtatttagctcatttac
atttccaatgctataccaaaagtcccccatacccacccccccccactccc
ctacccgcccactccccctttttggccctggcgttcccctgttctggggc
atataaagtttgtgtgtccaatgggcctctctttccagtgatggccgact
aggccatcttttgatacatatgcagctagagtcaagagctccggggtact
ggttagttcataatgttgttccacctatagggttgcaaatccctttagct
ccttgggtactttctctagctcctccgttgggagccctgtgatccatcca
taaaaaatggggctcaaaactgaacaaagaattctcacctgaggaatacc
gaatggcagagaagcacctgaaaaaatgttcaacatccttaatcatcagg
gaaatgcaaatcaaaacaaccctaagattccacctcacaccagtcagaat
gtctaagatcaaaaattcaggtgacagcagatgctggcgaggatgtggag
aaagaggaacactcctccattgttggtgggattgcaggcttgtacaacca
ctctggaaatccgtctggcggttcctcagaaaattggacatagtactacc
ggagatccagcaataccttctcctgggcatatatccagaagatgc
gaattctccagacagaggaagctctaggctcccttgttttcagagatagc
tggggttttcctctattttataaaaacacatttttgaaaatgtggagttt
tttaacatgtttttttaaacattaggaatacaattagaatgtttagggat
ttgctcagggctagaaaaaactgtacattctagtcatctgcaggagtcca
gttctggagcaaaggactaaaggaaaaaaaaaaaaccagaggggaggacc
aagaggacagacctaatttgctgggcaagtaccacaaagaaataatgagg
tcccaggagaagcagagctctgatgtggggaactgaatcctttgccaaca
ctttcataagacctgttttcctttctactgccagataaaggtctgtgtgg
ccagaagggaagaaagaagaaatggagaggaagcatttgaccaaaaaaaa
aaaaaaaaaaaaagaaagaaagaaaaaatggacgagaaccattcaacacc
gggctctggctctgggtgaggtctccttcaaaagtaccacaagtgatttt
aagcccaacaagtgccagagaatgaaagagtcaaaccggataggactgtc
tcaagagctgttatcagggaaaacatgtttcacttagcagacatagccta
aaatggatagtcaaatatcagcatatgtgtacacacgtgcaatttttttt
tttagaaaaataacaacaccgagcaaaacttcaaactttaaattctcatc
tttcctagaaggagcaaataattattttcaaatgtaaatgtaaacatcct
cttagggccagttgcctctgaacatggttaactggctcatgcttggaaaa
gaaacaaacaaacaacaaaaaacccacctagccactctgcaaagagtgac
agttacccctatttcttccctcctgtcattatatgactctcagtctttag
aaaaatatcattctgttttgtgtatgacagtctagtttttttttcttttt
gtgtaatatcacagcactatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86745281_86745831
seq2: B6Ng01-083B22.b_44_594 (reverse)

seq1  CGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTT  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTTTGAGCCCCATTTTTT  50

seq1  ATGGATGGATCACAGGGCTCCCAACGGAGGAGCTAGAGAAAGTACCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGATCACAGGGCTCCCAACGGAGGAGCTAGAGAAAGTACCCAAG  100

seq1  GAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAAC  150
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAAGGGATTTGCAACCCTATAGGTGGAACAACATTATGAACTAAC  150

seq1  CAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCC  200

seq1  TAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAACTTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACACAAACTTTATA  250

seq1  TGCCCCAGAACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGCGGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGAACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGCGGGTA  300

seq1  GGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAA  350
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTGGGGGGGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAAA  350

seq1  TGTAAATGAGCTAAATACCTAATAAAAAATGGAAAGAAAAAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAGCTAAATACCTAATAAAAAATGGAAAGAAAAAAAAAAAAAA  400

seq1  AAAAAAAAAAAAAAAAAAAGAAGAGGGTGAGCAGCACCCATGTGCTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAGAAGAGGGTGAGCAGCACCCATGTGCTTCCT  450

seq1  CCTTTGTATCATTATCCCTGGACTACTGATATTCAGGAGCCATTTTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTATCATTATCCCTGGACTACTGATATTCAGGAGCCATTTTACAT  500

seq1  ACACACTATTTAATAACTTGTCTCCATTTCCCTTCTTTCTTTGTAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTATTTAATAACTTGTCTCCATTTCCCTTCTTTCTTTGTAGAATT  550

seq1  C  551
      |
seq2  C  551

seq1: chr14_86581988_86583024
seq2: B6Ng01-083B22.g_68_1090

seq1  GAATTCTCCAGACAGAGGAAGCTCTAGGCTCCCTTGTTTTCAGAGATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGACAGAGGAAGCTCTAGGCTCCCTTGTTTTCAGAGATAGC  50

seq1  TGGGGTTTTCCTCTATTTTATAAAAACACATTTTTGAAAATGTGGAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTTCCTCTATTTTATAAAAACACATTTTTGAAAATGTGGAGTTT  100

seq1  TTTAACATGTTTTTTTAAACATTAGGAATACAATTAGAATGTTTAGGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATGTTTTTTTAAACATTAGGAATACAATTAGAATGTTTAGGGAT  150

seq1  TTGCTCAGGGCTAGAAAAAACTGTACATTCTAGTCATCTGCAGGAGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAGGGCTAGAAAAAACTGTACATTCTAGTCATCTGCAGGAGTCCA  200

seq1  GTTCTGGAGCAAAGGACTAAAGGAAAAAAAAAAAACCAGAGGGGAGGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGAGCAAAGGACTAAAGGAAAAAAAAAAAACCAGAGGGGAGGACC  250

seq1  AAGAGGACAGACCTAATTTGCTGGGCAAGTACCACAAAGAAATAATGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGACAGACCTAATTTGCTGGGCAAGTACCACAAAGAAATAATGAGG  300

seq1  TCCCAGGAGAAGCAGAGCTCTGATGTGGGGAACTGAATCCTTTGCCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGAGAAGCAGAGCTCTGATGTGGGGAACTGAATCCTTTGCCAACA  350

seq1  CTTTCATAAGACCTGTTTTCCTTTCTACTGCCAGATAAAGGTCTGTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATAAGACCTGTTTTCCTTTCTACTGCCAGATAAAGGTCTGTGTGG  400

seq1  CCAGAAGGGAAGAAAGAAGAAATGGAGAGGAAGCATTTGACCAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGGGAAGAAAGAAGAAATGGAGAGGAAGCATTTGACCAAAAAAAA  450

seq1  AAAAAAAAAAAAAGAAAGAAAGAAAAAATGGACGAGAACCATTCAACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGAAAGAAAGAAAAAATGGACGAGAACCATTCAACACC  500

seq1  GGGCTCTGGCTCTGGGTGAGGTCTCCTTCAAAAGTACCACAAGTGATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCTGGCTCTGGGTGAGGTCTCCTTCAAAAGTACCACAAGTGATTTT  550

seq1  AAGCCCAACAAGTGCCAGAGAATGAAAGAGTCAAACCGGATAGGACTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAACAAGTGCCAGAGAATGAAAGAGTCAAACCGGATAGGACTGTC  600

seq1  TCAAGAGCTGTTATCAGGGAAAACATGTTTCACTTAGCAGACATAGCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGCTGTTATCAGGGAAAACATGTTTCACTTAGCAGACATAGCCTA  650

seq1  AAATGGATAGTCAAATATCAGCATATGTGTACACACGTGCAATTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGATAGTCAAATATCAGCATATGTGTACACACGTGCAATTTTTTTT  700

seq1  TTTAGAAAAATAACAACACCGAGCAAAACTTCAAACTTTAAATTCTCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAAATAACAACACCGAGCAAAACTTCAAACTTTAAATTCTCATC  750

seq1  TTTCCTAGAAGGAGCAAATAATTATTTTCAAATGTAAATGTAAACATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAGAAGGAGCAAATAATTATTTTCAAATGTAAATGTAAACATCCT  800

seq1  CTTAGGGCCAGTTGCCTCTGAACATGGTTAACTGGCTCATGCTTGGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGCCAGTTGCCTCTGAACATGGTTAACTGGCTCATGCTTGGAAAA  850

seq1  AGAAAACAAACAAACAAACAAAAAACCCACCTAGCCACTCTGCAAAAGAG  900
         |||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  --GAAACAAACAAAC-AACAAAAAACCCACCTAGCCACTCTGC-AAAGAG  896

seq1  TGACAGTTACCCCTATTTCTTCCCTCCTGTTCATTATATGACTCTCCAGT  950
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TGACAGTTACCCCTATTTCTTCCCTCCTG-TCATTATATGACTCT-CAGT  944

seq1  CTTTAGAAAAATTATCATTCTGTTTTGTGTATGACAGTCCTAGTTTTTTT  1000
      ||||||||||| |||||||||||||||||||||||||| |||||||||||
seq2  CTTTAGAAAAA-TATCATTCTGTTTTGTGTATGACAGT-CTAGTTTTTTT  992

seq1  TTCTTTTTGTGGTTAAATTATCCACAGCACTTATCTT  1037
      |||||||||||  |||  ||| |||||||| ||||||
seq2  TTCTTTTTGTG--TAA--TAT-CACAGCAC-TATCTT  1023