BAC Information

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BAC

Clone NameB6Ng01-083J23
Chromosome14 (Build37)
Map Location 89,871,097 - 89,871,791
singlet/doubletsinglet
Overlap genenone
Upstream genePcdh20
Downstream geneEG328451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083J23.bB6Ng01-083J23.g
ACCDH897833DH897834
length988879
definitionDH897833|Mus musculus domesticus DNA, BAC clone: B6Ng01-083J23, 5' end.DH897834|Mus musculus domesticus DNA, BAC clone: B6Ng01-083J23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaaagaaatcatataagtaaacttatacagagtgaataggct
ttatatgtaaaacatgtatttacacatttgtataaataacaattaatgaa
aatgaggcaatgaaatataaagagatcaacaataaatatatgggaggatt
tttatttagttttttcttttttaatttttatgcattactctctcatatat
tatatcctaacaatagtttcccctatttcttccaatccagtcttctccca
tctcttctccccctacccatcatccagtcttccatttctcttcagaaaag
gacaggtttcccagggatatcaacttaacatagcatattatgttgcaata
agatcaggcacttccttcatgttttaaggcttaaaaaggtgaactaatag
aagggaaagggtcccaaaaccaggcaaaagagtcagacagcccctgctca
ttaggaattctacaagaataccaaggtacacaactataatatatatacta
tgtatatggagagagcctagatcagatccacgcaggccctagttgttggt
tcagtctctatgagctgctacgagccctggttaattgattctttggattt
tcttgtggtgtccttgtctctgtgtcctccaatgtccagcccaacttcca
caaggttcctccaagctccaactaattcttagctccaggtatctgcatct
gtttccattggttgctgaaagaagcctcactgatgattattataatagac
tcctgtctaaaagaatagctaatattattagatattatcttattgacttt
ttcacccagtcatgttaagttctaccataggtagctgggatatccagcct
ttggttcctgcctctttaggtagcatcagggtatgctcctaatcaaggta
tgggtctgaagtggatctgttcttttctggccacacccacaagtctgtgc
cccatttatcacatcacattatacaggcaaaacaaatt
gaattcacaactgaggagtctccaatggctaagaagcacctaaagaaatg
ttcaaaatccttagtgattggagaaatgcaaatcaaagtgaccctgagat
tccaccttaaaccaataagaatgacaaagatgtaaatgaagaaaattcct
aataaaaaatggaaaaaaatcagaaaaaaaagaaaaaagaaaaacacaaa
cagtcaaaaagaaaaaaaatcaaagcattgggtgacaactagggttggag
tggatgtggagaaagaagaacactcctccattgctgatgggattgcaaac
tgttacaaccactctggaaatcaatctggaagttcctcagaaaaatggaa
atagatatatctgaagacgcagctataacacttttgggaatatacctaaa
agatttcccaccatgcaacagggacacgtgttccacgatgttcctagcag
ccttatttgtgatagccagaagatggaatcaatctagatgtcccacaaca
gaggaacgatacagaaaatgtgtttcatttacacagtggaatactcctgg
gctattaataacgaggacatcctgaattttgcaggcacatggatataact
agaaaatatcatcctgagtgaagtaactcagacccaaaaggacatgcatg
gtacatactcactaataagtagatactagccatcgaaaaaacacaaacga
acaaacaaacaaacagtcagaatacccaagatacagtccacagaactcaa
aaagctcagcaaactgaactgttcaagtgaggaatcctaagtcccacttg
ggagagagaagaaagcaatcacaagtagggagagactaagatatctggga
gggaaagtggactgggtgggagggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_89871097_89871791
seq2: B6Ng01-083J23.b_43_737

seq1  GAATTCCTGAAAGAAATCATATAAGTAAACTTATACAGAGTGAATAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAAGAAATCATATAAGTAAACTTATACAGAGTGAATAGGCT  50

seq1  TTATATGTAAAACATGTATTTACACATTTGTATAAATAACAATTAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGTAAAACATGTATTTACACATTTGTATAAATAACAATTAATGAA  100

seq1  AATGAGGCAATGAAATATAAAGAGATCAACAATAAATATATGGGAGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCAATGAAATATAAAGAGATCAACAATAAATATATGGGAGGATT  150

seq1  TTTATTTAGTTTTTTCTTTTTTAATTTTTATGCATTACTCTCTCATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAGTTTTTTCTTTTTTAATTTTTATGCATTACTCTCTCATATAT  200

seq1  TATATCCTAACAATAGTTTCCCCTATTTCTTCCAATCCAGTCTTCTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCTAACAATAGTTTCCCCTATTTCTTCCAATCCAGTCTTCTCCCA  250

seq1  TCTCTTCTCCCCCTACCCATCATCCAGTCTTCCATTTCTCTTCAGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCCCCCTACCCATCATCCAGTCTTCCATTTCTCTTCAGAAAAG  300

seq1  GACAGGTTTCCCAGGGATATCAACTTAACATAGCATATTATGTTGCAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTTTCCCAGGGATATCAACTTAACATAGCATATTATGTTGCAATA  350

seq1  AGATCAGGCACTTCCTTCATGTTTTAAGGCTTAAAAAGGTGAACTAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGCACTTCCTTCATGTTTTAAGGCTTAAAAAGGTGAACTAATAG  400

seq1  AAGGGAAAGGGTCCCAAAACCAGGCAAAAGAGTCAGACAGCCCCTGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAGGGTCCCAAAACCAGGCAAAAGAGTCAGACAGCCCCTGCTCA  450

seq1  TTAGGAATTCTACAAGAATACCAAGGTACACAACTATAATATATATACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAATTCTACAAGAATACCAAGGTACACAACTATAATATATATACTA  500

seq1  TGTATATGGAGAGAGCCTAGATCAGATCCACGCAGGCCCTAGTTGTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGGAGAGAGCCTAGATCAGATCCACGCAGGCCCTAGTTGTTGGT  550

seq1  TCAGTCTCTATGAGCTGCTACGAGCCCTGGTTAATTGATTCTTTGGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCTATGAGCTGCTACGAGCCCTGGTTAATTGATTCTTTGGATTT  600

seq1  TCTTGTGGTGTCCTTGTCTCTGTGTCCTCCAATGTCCAGCCCAACTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGGTGTCCTTGTCTCTGTGTCCTCCAATGTCCAGCCCAACTTCCA  650

seq1  CAAGGTTCCTCCAAGCTCCAACTAATTCTTAGCTCCAGGTATCTG  695
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTCCTCCAAGCTCCAACTAATTCTTAGCTCCAGGTATCTG  695