BAC Information

Click to search

BAC

Clone NameB6Ng01-084L11
Chromosome14 (Build37)
Map Location 50,167,242 - 50,286,606
singlet/doubletdoublet
Overlap genenone
Upstream gene4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
Downstream gene3632451O06Rik, LOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084L11.bB6Ng01-084L11.g
ACCDH898588DH898589
length7151,170
definitionDH898588|Mus musculus domesticus DNA, BAC clone: B6Ng01-084L11, 5' end.DH898589|Mus musculus domesticus DNA, BAC clone: B6Ng01-084L11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,167,242 - 50,167,956)(50,285,416 - 50,286,606)
sequence
gaattccttttgatgtctccattatcaaatgttgcacccagaagagagta
agtagagagggtaagaagagggagaaagtagagagggtgggcaggacaag
gaaaagaggagtaagataattctgtccttgcaaatattttcagggtttca
tcgttttctgaaaatttctttcattctgtaatgttaataaaatgtaaatt
ttctcctggaatcttaggggatagaacaaaataaacacttaaagcaattt
gtatggtgtgtgcatgcagtagaaacccaataaatgcagagcaatgtgaa
tgtaggacatgccatatgtggaaaagaactgagggagtcaggatatgaag
ggcatatgtccattgccccagctgtgttgaggcagggtgtactgcttcaa
gaatgaagtcactatcataggaaattcactgtcttctctgaagaattacc
tgatggtttattagccaataatgtatgttttaaatgtataagtagataca
gaatgttgttaatatttccatcagcatagaaactgataacaaagtaccac
cgttataatttttacttctaaaattatattttaattcttcaagattataa
cctttctttggcccctccaaatcttcttcccatatacccctctccactct
tcttcaaattaatggcttttaacaactaaatgttatcacagttttgtatg
tgggtgtatgtgtgt
gaattcctggttgtttcccatactacacacccgtggaccatacaagaact
ggcttggtggatttagaaatgcaagctaggaaactgccactagcccgagt
cctccaactaattgggtaaggaaaaggtcttatcacgtgtcttgagggta
agcacctgggttattggccttatacacggttacatagtgtatgcacaatg
ggctgtttcatcatctccacagtctgtcaagccatgtgcactttcctttc
agatgtctagtctgcacagtagagggagaatgaattccacatgtactaga
agggagtgactgcctatttccatgtgtgccatggtgactgctgtttcagt
cactgctctgcctccaggagtctgtcatggggtactattgcttgaataaa
atgcattaacaaggtagttgttgttaaacgtgcacagacctacacaaaaa
aggaactgaacttgttctaatgttttgtcctaattcagatcccatagctg
tgctccctgacctgagggtcccagcccccagttggcttcgattggtaata
aagaagtgttgtacagcaaatgactggtcagggagatggaggtgggacat
ttagattgcatgagcaaggggacaaccaagagagagggggaagaggagaa
tcatcatgactcagaggaaaaaaagatcagatttaaaagctgcaagcgag
agagaatccaacaatgtaggtggaaaggaaatacagccctaaggttgccc
agaaggtaacagggcagcaaagataaaatatagatttagaaggtgttaaa
tcaggaataccagagagaagtatgtgctagcaaagggaggtttacaagtg
cccagcaattgagctagtcagagcatatcaaattagctggtgtgtgcgtg
ccttttgttcatgatgcagagagcttttagcaggtgccaaagcagtttaa
ctaattcacactacatgaactgctttgtaaggagcaaagagcatgtgctt
ttagtattgaaaagtgtagcagtctctggccgtctgtctactgagagacg
caaacttgaagtttctcccaactttagaaacctggatacaatgcagcagg
acaggtttaacccttgcataagaactatgtagaagccagttgccttccag
cataggaattacgccattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50167242_50167956
seq2: B6Ng01-084L11.b_49_763

seq1  GAATTCCTTTTGATGTCTCCATTATCAAATGTTGCACCCAGAAGAGAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTGATGTCTCCATTATCAAATGTTGCACCCAGAAGAGAGTA  50

seq1  AGTAGAGAGGGTAAGAAGAGGGAGAAAGTAGAGAGGGTGGGCAGGACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGAGGGTAAGAAGAGGGAGAAAGTAGAGAGGGTGGGCAGGACAAG  100

seq1  GAAAAGAGGAGTAAGATAATTCTGTCCTTGCAAATATTTTCAGGGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGGAGTAAGATAATTCTGTCCTTGCAAATATTTTCAGGGTTTCA  150

seq1  TCGTTTTCTGAAAATTTCTTTCATTCTGTAATGTTAATAAAATGTAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTCTGAAAATTTCTTTCATTCTGTAATGTTAATAAAATGTAAATT  200

seq1  TTCTCCTGGAATCTTAGGGGATAGAACAAAATAAACACTTAAAGCAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGGAATCTTAGGGGATAGAACAAAATAAACACTTAAAGCAATTT  250

seq1  GTATGGTGTGTGCATGCAGTAGAAACCCAATAAATGCAGAGCAATGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTGTGTGCATGCAGTAGAAACCCAATAAATGCAGAGCAATGTGAA  300

seq1  TGTAGGACATGCCATATGTGGAAAAGAACTGAGGGAGTCAGGATATGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGACATGCCATATGTGGAAAAGAACTGAGGGAGTCAGGATATGAAG  350

seq1  GGCATATGTCCATTGCCCCAGCTGTGTTGAGGCAGGGTGTACTGCTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATGTCCATTGCCCCAGCTGTGTTGAGGCAGGGTGTACTGCTTCAA  400

seq1  GAATGAAGTCACTATCATAGGAAATTCACTGTCTTCTCTGAAGAATTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAGTCACTATCATAGGAAATTCACTGTCTTCTCTGAAGAATTACC  450

seq1  TGATGGTTTATTAGCCAATAATGTATGTTTTAAATGTATAAGTAGATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTTTATTAGCCAATAATGTATGTTTTAAATGTATAAGTAGATACA  500

seq1  GAATGTTGTTAATATTTCCATCAGCATAGAAACTGATAACAAAGTACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTGTTAATATTTCCATCAGCATAGAAACTGATAACAAAGTACCAC  550

seq1  CGTTATAATTTTTACTTCTAAAATTATATTTTAATTCTTCAAGATTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTATAATTTTTACTTCTAAAATTATATTTTAATTCTTCAAGATTATAA  600

seq1  CCTTTCTTTGGCCCCTCCAAATCTTCTTCCCATATACCCCTCTCCACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTTGGCCCCTCCAAATCTTCTTCCCATATACCCCTCTCCACTCT  650

seq1  TCTTCAAATTAATGGCTTTTAACAACTAAATGTTATCACAGTTTTGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAATTAATGGCTTTTAACAACTAAATGTTATCACAGTTTTGTATG  700

seq1  TGGGTGTATGTGTGT  715
      |||||||||||||||
seq2  TGGGTGTATGTGTGT  715

seq1: chr14_50285416_50286606
seq2: B6Ng01-084L11.g_72_1241 (reverse)

seq1  TGAATGGCGTAATACTCCTGATGCTTTGGAAGGCAACTTGCTTTCTACAT  50
      |||||||||||||  |||| ||||  |||||||||||| || ||||||||
seq2  TGAATGGCGTAAT--TCCT-ATGC--TGGAAGGCAACTGGC-TTCTACAT  44

seq1  AG-TCTTATTGCAGGTGTTAACACTGTCCTGCCTGCATGGTATCCCAGTT  99
      || ||||| |||| | |||||  |||||||| |||||| ||||||  |||
seq2  AGTTCTTA-TGCAAGGGTTAAACCTGTCCTG-CTGCATTGTATCCAGGTT  92

seq1  TCTAAAGGTTTGTGAAGAAACTTCAAGTTTTGCGTCTTCTCAGTAGACAG  149
      |||||||  ||| | |||||||||||| |||||||| |||||||||||||
seq2  TCTAAAG--TTG-GGAGAAACTTCAAG-TTTGCGTC-TCTCAGTAGACAG  137

seq1  ACGGGCCAAGAGACTGCTACACTTTTCAATACTAAAAGCACAATGCTTCT  199
      ||||  | ||||||||||||||||||||||||||||||||| |||| |||
seq2  ACGG--CCAGAGACTGCTACACTTTTCAATACTAAAAGCAC-ATGC-TCT  183

seq1  TTGCTCCTTACAAAGCAGTTCATGTAGTGGTGAATTAGTTAAACTGCTTT  249
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTGCTCCTTACAAAGCAGTTCATGTAGT-GTGAATTAGTTAAACTGCTTT  232

seq1  GGCACCTGCCTAAAAGCTCTCTGCATTCATGAACAAAAGGCACGCACACA  299
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  GGCACCTG-CTAAAAGCTCTCTGCA-TCATGAACAAAAGGCACGCACACA  280

seq1  CCAGCTAATTTTGATATGCTCTGACTAGCTCAATTGCTGGGCACTTGTAA  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTAA-TTTGATATGCTCTGACTAGCTCAATTGCTGGGCACTTGTAA  329

seq1  ACCTCCCCTTTGCTAGCACATACTTCTCTCTGGTATTCCTGATTTAACAC  399
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCT-CCCTTTGCTAGCACATACTTCTCTCTGGTATTCCTGATTTAACAC  378

seq1  CTTCTAAATCTATATTTTATCTTTGCTGCCCTGTTACCTTCTGGGCAACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAATCTATATTTTATCTTTGCTGCCCTGTTACCTTCTGGGCAACC  428

seq1  TTAGGGCTGTATTTCCTTTCCACCTACATTGTTGGATTCTCTCTCGCTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCTGTATTTCCTTTCCACCTACATTGTTGGATTCTCTCTCGCTTG  478

seq1  CAGCTTTTAAATCTGATCTTTTTTTCCTCTGAGTCATGATGATTCTCCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTAAATCTGATCTTTTTTTCCTCTGAGTCATGATGATTCTCCTC  528

seq1  TTCCCCCTCTCTCTTGGTTGTCCCCTTGCTCATGCAATCTAAATGTCCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTCTCTCTTGGTTGTCCCCTTGCTCATGCAATCTAAATGTCCCA  578

seq1  CCTCCATCTCCCTGACCAGTCATTTGCTGTACAACACTTCTTTATTACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCTCCCTGACCAGTCATTTGCTGTACAACACTTCTTTATTACCA  628

seq1  ATCGAAGCCAACTGGGGGCTGGGACCCTCAGGTCAGGGAGCACAGCTATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAAGCCAACTGGGGGCTGGGACCCTCAGGTCAGGGAGCACAGCTATG  678

seq1  GGATCTGAATTAGGACAAAACATTAGAACAAGTTCAGTTCCTTTTTTGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGAATTAGGACAAAACATTAGAACAAGTTCAGTTCCTTTTTTGTG  728

seq1  TAGGTCTGTGCACGTTTAACAACAACTACCTTGTTAATGCATTTTATTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTGTGCACGTTTAACAACAACTACCTTGTTAATGCATTTTATTCA  778

seq1  AGCAATAGTACCCCATGACAGACTCCTGGAGGCAGAGCAGTGACTGAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAGTACCCCATGACAGACTCCTGGAGGCAGAGCAGTGACTGAAAC  828

seq1  AGCAGTCACCATGGCACACATGGAAATAGGCAGTCACTCCCTTCTAGTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCACCATGGCACACATGGAAATAGGCAGTCACTCCCTTCTAGTAC  878

seq1  ATGTGGAATTCATTCTCCCTCTACTGTGCAGACTAGACATCTGAAAGGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAATTCATTCTCCCTCTACTGTGCAGACTAGACATCTGAAAGGAA  928

seq1  AGTGCACATGGCTTGACAGACTGTGGAGATGATGAAACAGCCCATTGTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACATGGCTTGACAGACTGTGGAGATGATGAAACAGCCCATTGTGC  978

seq1  ATACACTATGTAACCGTGTATAAGGCCAATAACCCAGGTGCTTACCCTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTATGTAACCGTGTATAAGGCCAATAACCCAGGTGCTTACCCTCA  1028

seq1  AGACACGTGATAAGACCTTTTCCTTACCCAATTAGTTGGAGGACTCGGGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACGTGATAAGACCTTTTCCTTACCCAATTAGTTGGAGGACTCGGGC  1078

seq1  TAGTGGCAGTTTCCTAGCTTGCATTTCTAAATCCACCAAGCCAGTTCTTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCAGTTTCCTAGCTTGCATTTCTAAATCCACCAAGCCAGTTCTTG  1128

seq1  TATGGTCCACGGGTGTGTAGTATGGGAAACAACCAGGAATTC  1191
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCCACGGGTGTGTAGTATGGGAAACAACCAGGAATTC  1170