BAC Information

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BAC

Clone NameB6Ng01-085I18
Chromosome14 (Build37)
Map Location 50,376,403 - 50,377,478
singlet/doubletsinglet
Overlap gene3632451O06Rik
Upstream geneLOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
Downstream geneLOC667006, Olfr722, Olfr723, Olfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085I18.bB6Ng01-085I18.g
ACCDH899192DH899193
length1,0131,075
definitionDH899192|Mus musculus domesticus DNA, BAC clone: B6Ng01-085I18, 5' end.DH899193|Mus musculus domesticus DNA, BAC clone: B6Ng01-085I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttacaaccccatgggacaaggccatagttgaacgtgctcatcg
caccttaaagaattggctttttaagacaaaagagggtcagctatatcccc
caaggtcaccaaaggcccaccttgccttcactttatttgtcctaaatttc
ttgcacaccgatatcaagggccagtctgcagcggatcgccactggcatcc
agttacttctaattcttatgcattggtaaaatggaaggaccccctgacta
atgaatggaagggtccagatccagttctaatttggggtaggggctcagtt
tgtgttttttcacgagatgaagatggagcgcggtggctgccagagagatt
aattcgtcagatgaacacagattctgactcttctggtaagtatcattcta
aagactaaaattccttttgtgcttaaaattcagctgagagcaacagctct
caaagctgttctccagctactctctgagccagcttcccgacaggaggccg
gagactagcctcagttttacaatttgcatttgaataaagtacctagactt
ccccaaaagaagttctgctttcctactttctcactgtctttcaagatttt
gtctttcaagcaggtaaatcaacattcccgaggcggaccagcggatgtgc
atccccgcccccctagagcacacaggtggcagctgttatccccagactca
ggacatttccagcatgtggcttttcagtctgagttaaaaatttaggttta
cctagagggctagaagagtagatatttccatattaataaagattggtttt
tattttttgatagacaggcttagccccttagctgacctctggcttttcac
ccttgctgttaccgcaaggtgtcctttagctcaataggctgtggaaaaaa
cagggatgaggaggaacgacttctagctcctattttacccacaattcgtg
gtgtattaccgacatatttcttgcttaagctttgctaattcctgaggttg
ataattcttcctt
gaattccaataaaaattcacaagcttctcacactttagattccaacaaac
aagtaacttgtaatgagcattaacaaggagtcaatccaccatactcaggg
gtgatgtgtctgactacactgtcagacacaagaagtgtaatagccatgtg
caaagaaatggtgaatgaagtcacaaacacaaacgtgtaacaagaggcag
taaaaatgacccagcagatggcatgggagagtattagaatgagaaagaag
ggttcataacatgcagattagaaagaacaaattcaggaaaagacaaagac
aaaatttccagagaaacaagacactaagaggagcagagttcacagcaggt
cacggggaatgtaaactagaagaccaaatagcatcctcaaagggctgaga
agtggggaacaggaattctattctcatgcatttacagaataaaggcacag
tactaataacaggctttataaaataaactgccaagagaggaagagacaca
accttgacaggaaggaataaaattcaggaagagctagaaagcaagtaagc
tggtgaacgtgtacagaaattatagccatttaaactttatgaagtgagag
gacagaaaagagctagtgaacagtaatagacataagccaggagatatcat
aagatgaaagtgttctaaagctcttttatagacatctattggtttgctag
ttcgtatgtgcccagggacagcagtgcctcagcatgcgtgtggaggtcag
aggacaagtttggactgttgttctgtcttacctcactgaagttgctcttg
ctgttacttgctgctactgcactgcatatcccaagctagctagcctagga
gctttttggccaatcctcttatttctacctcccttttttctactactttt
cactgtagtagtgcatgggttattgaggctctcacggtgtccagcgtttt
gtttttaaactagggattttttcctcctgaactgtttctctatcacgatt
agagccccttttataggaggtaaaccagtgataaaagttagtattttgct
tagtgaacatgaataggatgctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50376403_50377478
seq2: B6Ng01-085I18.g_70_1144 (reverse)

seq1  GAAAGCATTACTATTCATGTTTAACTAAGCAAAA-ACTAACTTTTATCAC  49
      ||||||| | ||||||||| || ||||||||||| |||||||||||||||
seq2  GAAAGCA-TCCTATTCATG-TTCACTAAGCAAAATACTAACTTTTATCAC  48

seq1  TGTTTTACCATCCATTAAAAGGGGCTCTAATCAGTGATAGAGAAACAGTT  99
      || |||||| |||  ||||||||||||||||| |||||||||||||||||
seq2  TGGTTTACC-TCCTATAAAAGGGGCTCTAATC-GTGATAGAGAAACAGTT  96

seq1  CAGGAGAAAAAAATCCCTAGTTTAAAAAC-AAACGCTGGACACAGTGAGA  148
      |||||| |||||||||||||||||||||| ||||||||||||| ||||| 
seq2  CAGGAGGAAAAAATCCCTAGTTTAAAAACAAAACGCTGGACACCGTGAG-  145

seq1  AGCCTCAATAACCCATGCACTACTACAGTGAAAAGTAGTAGAAAAAAGGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCAATAACCCATGCACTACTACAGTGAAAAGTAGTAGAAAAAAGGG  195

seq1  AGGTAGAAATAAGAGGATTGGCC-AGAAGCTCCTAGGCTAGCTAGCTTGG  247
      ||||||||||||||||||||||| | ||||||||||||||||||||||||
seq2  AGGTAGAAATAAGAGGATTGGCCAAAAAGCTCCTAGGCTAGCTAGCTTGG  245

seq1  GATATGCAGTGCAGTAGCAGC-AGTAACAGCAAGAGCAACTTCAGTGAGG  296
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GATATGCAGTGCAGTAGCAGCAAGTAACAGCAAGAGCAACTTCAGTGAGG  295

seq1  TAAGACAGAACAACAGTCCAAACTTGTCCTCTGACCTCCACACGCATGCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAACAACAGTCCAAACTTGTCCTCTGACCTCCACACGCATGCT  345

seq1  GAGGCACTGCTGTCCCTGGGCACATACGAACTAGCAAACCAATAGATGTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACTGCTGTCCCTGGGCACATACGAACTAGCAAACCAATAGATGTC  395

seq1  TAT-AAAGAGCTTTAGAACACTTTCATCTTATGATATCTCCTGGCTTATG  445
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGAGCTTTAGAACACTTTCATCTTATGATATCTCCTGGCTTATG  445

seq1  TCTATTACTGTTCACTAGCTCTTTTCTGTCCTCTCACTTCATAAAGTTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTACTGTTCACTAGCTCTTTTCTGTCCTCTCACTTCATAAAGTTTA  495

seq1  AATGGCTATAATTTCTGTACACGTTCACCAGCTTACTTGCTTTCTAGCTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTATAATTTCTGTACACGTTCACCAGCTTACTTGCTTTCTAGCTC  545

seq1  TTCCTGAATTTTATTCCTTCCTGTCAAGGTTGTGTCTCTTCCTCTCTTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAATTTTATTCCTTCCTGTCAAGGTTGTGTCTCTTCCTCTCTTGG  595

seq1  CAGTTTATTTTATAAAGCCTGTTATTAGTACTGTGCCTTTATTCTGTAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATTTTATAAAGCCTGTTATTAGTACTGTGCCTTTATTCTGTAAA  645

seq1  TGCATGAGAATAGAATTCCTGTTCCCCACTTCTCAGCCCTTTGAGGATGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAGAATAGAATTCCTGTTCCCCACTTCTCAGCCCTTTGAGGATGC  695

seq1  TATTTGGTCTTCTAGTTTACATTCCCCGTGACCTGCTGTGAACTCTGCTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGTCTTCTAGTTTACATTCCCCGTGACCTGCTGTGAACTCTGCTC  745

seq1  CTCTTAGTGTCTTGTTTCTCTGGAAATTTTGTCTTTGTCTTTTCCTGAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGTGTCTTGTTTCTCTGGAAATTTTGTCTTTGTCTTTTCCTGAAT  795

seq1  TTGTTCTTTCTAATCTGCATGTTATGAACCCTTCTTTCTCATTCTAATAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTTCTAATCTGCATGTTATGAACCCTTCTTTCTCATTCTAATAC  845

seq1  TCTCCCATGCCATCTGCTGGGTCATTTTTACTGCCTCTTGTTACACGTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCATGCCATCTGCTGGGTCATTTTTACTGCCTCTTGTTACACGTTT  895

seq1  GTGTTTGTGACTTCATTCACCATTTCTTTGCACATGGCTATTACACTTCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTGACTTCATTCACCATTTCTTTGCACATGGCTATTACACTTCT  945

seq1  TGTGTCTGACAGTGTAGTCAGACACATCACCCCTGAGTATGGTGGATTGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGACAGTGTAGTCAGACACATCACCCCTGAGTATGGTGGATTGA  995

seq1  CTCCTTGTTAATGCTCATTACAAGTTACTTGTTTGTTGGAATCTAAAGTG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGTTAATGCTCATTACAAGTTACTTGTTTGTTGGAATCTAAAGTG  1045

seq1  TGAGAAGCTTGTGAATTTTTATTGGGAATTC  1076
      ||||||||||||||||||||||| |||||||
seq2  TGAGAAGCTTGTGAATTTTTATT-GGAATTC  1075