BAC Information

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BAC

Clone NameB6Ng01-086G14
Chromosome14 (Build37)
Map Location 100,957,584 - 101,091,466
singlet/doubletdoublet
Overlap geneEG668684
Upstream geneLOC668672, EG546623, Klf12, LOC100043413, EG668683
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086G14.bB6Ng01-086G14.g
ACCDH899819DH899820
length8421,119
definitionDH899819|Mus musculus domesticus DNA, BAC clone: B6Ng01-086G14, 5' end.DH899820|Mus musculus domesticus DNA, BAC clone: B6Ng01-086G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,090,626 - 101,091,466)(100,957,584 - 100,958,714)
sequence
gaattcctagctagattgttttgtcttgttctctctatacaaccagattg
cttcttgtttgagttgccatcataacacccgaacggaattgttaaaacct
tgccttcatcatctctcttattggaaaatgtcatcagttcattacctgag
tttgtcttcccatggagattttttttctgaaatcaggaacctgacaagga
agagaatgaaaccattgacattccaaagcaggttggtaaaatgaaagagc
tgaaaatgttttcagagactaacaacagtggcagtcccttgtcataacca
agtcatagaggaaagagaagaaagttccagagatggaagagagggagatc
agggagaagccttcagacaggagttgtgtgtgggaggaacaacaactgct
ggcaaccggaaacaggaagtagcaaataaagaaagaaggaaggatggatg
aagaaatgtttttacttgatctgttttgtcaccccttgttggcaatctcc
actatctacaatattagacttagaaccactatggaaattcgtgtgtgtgt
gtgaacatgtttctaggactatttcactgagcagagaagacctggtctga
acctaagcactccaagccacaagatggaataaagaaggaagtgagctcct
tgtcagccctttgtctattggctgccgctgcttcacgcgtctgtcctcaa
gcatctccccaaccagggagccaaaacaaaccatttcttcctgaagttgc
tttgtgaggtgttttgtcacagttatgagtaaagcaggcagggaacaccc
aggcatcacagggcagggggcgggggtaggtggggtggggga
gaattcttgatatttgtggactagtgagtgtgtggaagaaaaacaagaac
ccagatctgaatctgcggaatgcacaccagggggaaagccaggggacgag
ccccagggaagtcagctgcaggaagattttctaacagcggtggtggaaga
gaggggctgggtcatggacttcctggctcacagccagctgggaaggagcc
agaaagctgggaaagcaattgaataaaaaataatgaaagtaacacagccc
aatggttttggtcattgggctcctggcaatgtcattagcaaacggtttcc
tgtgcacatcaagggagaggggatgcaagaaaggcctgtcaggtaatgta
aggaacctgggctctaattctatgcacatgtacaagcaaaatttccacag
tgttttgtaatatcatgcttagccagaaaacagagagagtaagtgaatta
ttttggcacatgtttataattttatttgatgtttttgatcatgtcatgaa
tttagcttccttctccccaggacactgtattagagacaggatctttatga
cagagatatgactatcaagaattggtgtgttggtaaacaattgaacacgg
atcccaaagtccccatctaatatcatacttgacataataattatcactgt
aaattcacgaagactccaattatcaaatgtattttatggaatgaaacctg
gtttgtctaattcacagattctaaatagactgtggacgagtcttaaaatc
tgccttcagtttaatttctttgcttgatttttcccccttggggtaaaaaa
ataacggacagctgtggggaaagtcactatatattctaaatagaagtttg
ataatgtgtttctggaaatttctggagttggccttttcaaccttattttg
aacaatttaaacatgtttcaagggttgatgcgaaaagtcttagaaaaaaa
caaaacaaacacacacaaaattgttgtccggtgtgactatggctgaaatg
tttaaaggcacgtggggatatttggagatcaaaattttgtcttctccaca
ggtcagttatggcgaactttactttgttcctaaaaagttttaagaagtta
ttttcttctgaagttttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101090626_101091466
seq2: B6Ng01-086G14.b_46_887 (reverse)

seq1  TCCCCCA-CCCACCTACCCCCGCCCCCTGCCCTGTGATGCCTGGGTGTTC  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCACCCCACCTACCCCCGCCCCCTGCCCTGTGATGCCTGGGTGTTC  50

seq1  CCTGCCTGCTTTACTCATAACTGTGACAAAACACCTCACAAAGCAACTTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCTTTACTCATAACTGTGACAAAACACCTCACAAAGCAACTTC  100

seq1  AGGAAGAAATGGTTTGTTTTGGCTCCCTGGTTGGGGAGATGCTTGAGGAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAATGGTTTGTTTTGGCTCCCTGGTTGGGGAGATGCTTGAGGAC  150

seq1  AGACGCGTGAAGCAGCGGCAGCCAATAGACAAAGGGCTGACAAGGAGCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCGTGAAGCAGCGGCAGCCAATAGACAAAGGGCTGACAAGGAGCTC  200

seq1  ACTTCCTTCTTTATTCCATCTTGTGGCTTGGAGTGCTTAGGTTCAGACCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTCTTTATTCCATCTTGTGGCTTGGAGTGCTTAGGTTCAGACCA  250

seq1  GGTCTTCTCTGCTCAGTGAAATAGTCCTAGAAACATGTTCACACACACAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCTCTGCTCAGTGAAATAGTCCTAGAAACATGTTCACACACACAC  300

seq1  ACGAATTTCCATAGTGGTTCTAAGTCTAATATTGTAGATAGTGGAGATTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATTTCCATAGTGGTTCTAAGTCTAATATTGTAGATAGTGGAGATTG  350

seq1  CCAACAAGGGGTGACAAAACAGATCAAGTAAAAACATTTCTTCATCCATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGGGGTGACAAAACAGATCAAGTAAAAACATTTCTTCATCCATC  400

seq1  CTTCCTTCTTTCTTTATTTGCTACTTCCTGTTTCCGGTTGCCAGCAGTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTTTCTTTATTTGCTACTTCCTGTTTCCGGTTGCCAGCAGTTG  450

seq1  TTGTTCCTCCCACACACAACTCCTGTCTGAAGGCTTCTCCCTGATCTCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTCCCACACACAACTCCTGTCTGAAGGCTTCTCCCTGATCTCCC  500

seq1  TCTCTTCCATCTCTGGAACTTTCTTCTCTTTCCTCTATGACTTGGTTATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCATCTCTGGAACTTTCTTCTCTTTCCTCTATGACTTGGTTATG  550

seq1  ACAAGGGACTGCCACTGTTGTTAGTCTCTGAAAACATTTTCAGCTCTTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGACTGCCACTGTTGTTAGTCTCTGAAAACATTTTCAGCTCTTTC  600

seq1  ATTTTACCAACCTGCTTTGGAATGTCAATGGTTTCATTCTCTTCCTTGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACCAACCTGCTTTGGAATGTCAATGGTTTCATTCTCTTCCTTGTC  650

seq1  AGGTTCCTGATTTCAGAAAAAAAATCTCCATGGGAAGACAAACTCAGGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCTGATTTCAGAAAAAAAATCTCCATGGGAAGACAAACTCAGGTA  700

seq1  ATGAACTGATGACATTTTCCAATAAGAGAGATGATGAAGGCAAGGTTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTGATGACATTTTCCAATAAGAGAGATGATGAAGGCAAGGTTTTA  750

seq1  ACAATTCCGTTCGGGTGTTATGATGGCAACTCAAACAAGAAGCAATCTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCCGTTCGGGTGTTATGATGGCAACTCAAACAAGAAGCAATCTGG  800

seq1  TTGTATAGAGAGAACAAGACAAAACAATCTAGCTAGGAATTC  841
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGAGAGAACAAGACAAAACAATCTAGCTAGGAATTC  842

seq1: chr14_100957584_100958714
seq2: B6Ng01-086G14.g_68_1186

seq1  GAATTCTTGATATTTGTGGACTAGTGAGTGTGTGGAAGAAAAACAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATATTTGTGGACTAGTGAGTGTGTGGAAGAAAAACAAGAAC  50

seq1  CCAGATCTGAATCTGCGGAATGCACACCAGGGGGAAAGCCAGGGGACGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCTGAATCTGCGGAATGCACACCAGGGGGAAAGCCAGGGGACGAG  100

seq1  CCCCAGGGAAGTCAGCTGCAGGAAGATTTTCTAACAGCGGTGGTGGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGGAAGTCAGCTGCAGGAAGATTTTCTAACAGCGGTGGTGGAAGA  150

seq1  GAGGGGCTGGGTCATGGACTTCCTGGCTCACAGCCAGCTGGGAAGGAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCTGGGTCATGGACTTCCTGGCTCACAGCCAGCTGGGAAGGAGCC  200

seq1  AGAAAGCTGGGAAAGCAATTGAATAAAAAATAATGAAAGTAACACAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTGGGAAAGCAATTGAATAAAAAATAATGAAAGTAACACAGCCC  250

seq1  AATGGTTTTGGTCATTGGGCTCCTGGCAATGTCATTAGCAAACGGTTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTTGGTCATTGGGCTCCTGGCAATGTCATTAGCAAACGGTTTCC  300

seq1  TGTGCACATCAAGGGAGAGGGGATGCAAGAAAGGCCTGTCAGGTAATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACATCAAGGGAGAGGGGATGCAAGAAAGGCCTGTCAGGTAATGTA  350

seq1  AGGAACCTGGGCTCTAATTCTATGCACATGTACAAGCAAAATTTCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTGGGCTCTAATTCTATGCACATGTACAAGCAAAATTTCCACAG  400

seq1  TGTTTTGTAATATCATGCTTAGCCAGAAAACAGAGAGAGTAAGTGAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTAATATCATGCTTAGCCAGAAAACAGAGAGAGTAAGTGAATTA  450

seq1  TTTTGGCACATGTTTATAATTTTATTTGATGTTTTTGATCATGTCATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCACATGTTTATAATTTTATTTGATGTTTTTGATCATGTCATGAA  500

seq1  TTTAGCTTCCTTCTCCCCAGGACACTGTATTAGAGACAGGATCTTTATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTTCCTTCTCCCCAGGACACTGTATTAGAGACAGGATCTTTATGA  550

seq1  CAGAGATATGACTATCAAGAATTGGTGTGTTGGTAAACAATTGAACACGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATATGACTATCAAGAATTGGTGTGTTGGTAAACAATTGAACACGG  600

seq1  ATCCCAAAGTCCCCATCTAATATCATACTTGACATAATAATTATCACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAGTCCCCATCTAATATCATACTTGACATAATAATTATCACTGT  650

seq1  AAATTCACGAAGACTCCAATTATCAAATGTATTTTATGGAATGAAACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACGAAGACTCCAATTATCAAATGTATTTTATGGAATGAAACCTG  700

seq1  GTTTGTCTAATTCACAGATTCTAAATAGACTGTGGACGAGTCTTAAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCTAATTCACAGATTCTAAATAGACTGTGGACGAGTCTTAAAATC  750

seq1  TGCCTTCAGTTTAATTTCTTTGCTTGATTTTTCCCCCTTGGGGTAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCAGTTTAATTTCTTTGCTTGATTTTTCCCCCTTGGGGTAAAAAA  800

seq1  ATAACGGACAGCTGTGGGGAAAGTCACTATATATTCTAAATAGAAGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGGACAGCTGTGGGGAAAGTCACTATATATTCTAAATAGAAGTTTG  850

seq1  ATAAGGTGTTTCTGGAAATTTCTGGAGTTGGCCTTTTCAACCTTATTTTG  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGTTTCTGGAAATTTCTGGAGTTGGCCTTTTCAACCTTATTTTG  900

seq1  AACAATTTAAAACATGTTTCAAGGGGTTGATGCGAAAAGTCTTAGAAAAA  950
      |||||||| ||||||||||||| |||||||||||||||||||||| ||||
seq2  AACAATTT-AAACATGTTTCAA-GGGTTGATGCGAAAAGTCTTAG-AAAA  947

seq1  AAACAAAACAAACAACAACAACAAAAATTGTTGTCCGGTGTGACTATGGC  1000
      |||||||||||||    |||   |||||||||||||||||||||||||||
seq2  AAACAAAACAAAC----ACACACAAAATTGTTGTCCGGTGTGACTATGGC  993

seq1  TGAAATGTTTTAAAGGCACGTGGGGATATTTGGAAGATCAAAATTTTGTC  1050
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  TGAAATG-TTTAAAGGCACGTGGGGATATTTGG-AGATCAAAATTTTGTC  1041

seq1  TTCT-CACAGGTCAGTTTATGGCGAACTTTACTTTGTTCCTAAAAAGTTT  1099
      |||| |||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCTCCACAGGTCAG-TTATGGCGAACTTTACTTTGTTCCTAAAAAGTTT  1090

seq1  TAAAGAAGTTTATTTTCTTCTTGAAGTTTTGA  1131
      | |||||| ||||||||||| |||||||||||
seq2  T-AAGAAG-TTATTTTCTTC-TGAAGTTTTGA  1119