BAC Information

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BAC

Clone NameB6Ng01-086J12
Chromosome14 (Build37)
Map Location 26,643,560 - 26,827,192
singlet/doubletdoublet
Overlap geneAnxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484
Upstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik
Downstream geneLOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086J12.bB6Ng01-086J12.g
ACCDH899947DH899948
length718897
definitionDH899947|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J12, 5' end.DH899948|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,643,560 - 26,644,277)(26,826,300 - 26,827,192)
sequence
gaattccaccagagcaaggattccaggaagctcctgaagcaagctgagag
cttgcagggagggagagcaaaggtgggagagagaaggggaagtgttttca
tgacaagaatttcaatccagggcaccctcaagcagacaagagaaacgtgc
cagggagagatgcccaaatcacaaaggagagacatctctttccataggat
gtcagacgctgcctgatgtatctatgtgactttcgtagcagtagcgggat
ctaggagccagagcaggtggctctgaggtgacacccaagtaagaggagag
gggcagagcatctgcacctgatgggcacccagggtgtatagcaggctcca
agagacgacctgatcccagctgagaggcagggagggaagaagccgttgga
gaggcagaccctaaaatctagagtggaaagtagtgggtggtagaaaccag
cagatgcaaatgagccacaccttaggagagtcaaattagcaacgtggttt
ggttaggagaggcagagtccatttatgtcctgtatgcctctcctcagtct
tggcacctgatggacaaactgatgtgggctgcagtcagggtgactgtttt
tattggagagtacgggggagagacatccaggggcatctggaagagtccag
gggagagattgaaagactgaagatgggcatcggactgcacctgatcaggg
tgggatggagggagaata
gaattcaactctgcagcagttgtagaggcctgtgtgccagggtgaggaag
tcaggcaggacccagcctgcaaacagcactttctggtctgacctgtttgc
acctcagagaatgacttattacctcccagttctcccatcccatccaagtt
aacaacccccaagacaaaagtgcccttgctgctaagaaactccccctcca
gctccctctctctccctctcccctctcctcttctctctctctctctctct
ctctctctctctctctccctctccctctccctttcctcctttctcctctc
cctcttcccttttctccctctccctttcccccctctctccctcacctctc
tccccctcccctccctccttctctctttccctctctacctcccctctctc
tctcctgctccacccccatctcccttcctgtctcttccctccccttctct
gccatttttgtttatccagcaccgcttactctcctctcactactgcttct
ggcaccatcgaaccatcgttcccttccttcctttctagcttgctttcttt
tcctcattccttcttttttagtgctaaatcagtactttcattttttctta
attaaaaaacaagccgggtggtggtggcacacgcctttaatcccagcact
tgggaggcagaggcaggcggatttctaaattttgaggccagcctggtcta
caaagtgagcgtcaggacagccagggctacacagagaaaccctgtcttga
aaaaaaccaaaaaaaaaaaaaaaaaaaaccaaaaaacaaaacaaactagt
tttccctataatgatgttaattttcgggctaggactgaaaaaaaaaaggg
agactgccaattttgaaggagatggatcaacttaaactgcaaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26643560_26644277
seq2: B6Ng01-086J12.b_46_763

seq1  GAATTCCACCAGAGCAAGGATTCCAGGAAGCTCCTGAAGCAAGCTGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCAGAGCAAGGATTCCAGGAAGCTCCTGAAGCAAGCTGAGAG  50

seq1  CTTGCAGGGAGGGAGAGCAAAGGTGGGAGAGAGAAGGGGAAGTGTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGGAGGGAGAGCAAAGGTGGGAGAGAGAAGGGGAAGTGTTTTCA  100

seq1  TGACAAGAATTTCAATCCAGGGCACCCTCAAGCAGACAAGAGAAACGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAATTTCAATCCAGGGCACCCTCAAGCAGACAAGAGAAACGTGC  150

seq1  CAGGGAGAGATGCCCAAATCACAAAGGAGAGACATCTCTTTCCATAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAGATGCCCAAATCACAAAGGAGAGACATCTCTTTCCATAGGAT  200

seq1  GTCAGACGCTGCCTGATGTATCTATGTGACTTTCGTAGCAGTAGCGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACGCTGCCTGATGTATCTATGTGACTTTCGTAGCAGTAGCGGGAT  250

seq1  CTAGGAGCCAGAGCAGGTGGCTCTGAGGTGACACCCAAGTAAGAGGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGCCAGAGCAGGTGGCTCTGAGGTGACACCCAAGTAAGAGGAGAG  300

seq1  GGGCAGAGCATCTGCACCTGATGGGCACCCAGGGTGTATAGCAGGCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGCATCTGCACCTGATGGGCACCCAGGGTGTATAGCAGGCTCCA  350

seq1  AGAGACGACCTGATCCCAGCTGAGAGGCAGGGAGGGAAGAAGCCGTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACGACCTGATCCCAGCTGAGAGGCAGGGAGGGAAGAAGCCGTTGGA  400

seq1  GAGGCAGACCCTAAAATCTAGAGTGGAAAGTAGTGGGTGGTAGAAACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGACCCTAAAATCTAGAGTGGAAAGTAGTGGGTGGTAGAAACCAG  450

seq1  CAGATGCAAATGAGCCACACCTTAGGAGAGTCAAATTAGCAACGTGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCAAATGAGCCACACCTTAGGAGAGTCAAATTAGCAACGTGGTTT  500

seq1  GGTTAGGAGAGGCAGAGTCCATTTATGTCCTGTATGCCTCTCCTCAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGAGAGGCAGAGTCCATTTATGTCCTGTATGCCTCTCCTCAGTCT  550

seq1  TGGCACCTGATGGACAAACTGATGTGGGCTGCAGTCAGGGTGACTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCTGATGGACAAACTGATGTGGGCTGCAGTCAGGGTGACTGTTTT  600

seq1  TATTGGAGAGTACGGGGGAGAGACATCCAGGGGCATCTGGAAGAGTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAGAGTACGGGGGAGAGACATCCAGGGGCATCTGGAAGAGTCCAG  650

seq1  GGGAGAGATTGAAAGACTGAAGATGGGCATCGGACTGCACCTGATCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGATTGAAAGACTGAAGATGGGCATCGGACTGCACCTGATCAGGG  700

seq1  TGGGATGGAGGGAGAATA  718
      ||||||||||||||||||
seq2  TGGGATGGAGGGAGAATA  718

seq1: chr14_26826300_26827192
seq2: B6Ng01-086J12.g_69_952 (reverse)

seq1  TAAGTCTGATCCATCTCCCTTCAAAATCTGGCAAGTCTCCCTTCTTCTCT  50
      ||||| |||||||||| |||||||||| |||| |||||||||| || | |
seq2  TAAGT-TGATCCATCT-CCTTCAAAAT-TGGC-AGTCTCCCTT-TTTTTT  45

seq1  TCCAGTTCCTAGCCCGAATAATCTAACATCATTATAGGACAAACTAGTTT  100
      | ||| |||||||||||| ||| |||||||||||||||  ||||||||||
seq2  TTCAG-TCCTAGCCCGAA-AAT-TAACATCATTATAGGGAAAACTAGTTT  92

seq1  GTTTTGTTTTTTTGGTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTCAAG  150
      |||||||||||| |   |||||||||||||||||||| | ||||||||||
seq2  GTTTTGTTTTTTGG---TTTTTTTTTTTTTTTTTTTTGGTTTTTTTCAAG  139

seq1  ACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGCGCTCACTTTGTAGAC  200
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGACGCTCACTTTGTAGAC  189

seq1  CAGGCTGGCCTC-AAACTTAGAAATCCGCCTGCCTCTGCCTCCCAAGTGC  249
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCCTCAAAATTTAGAAATCCGCCTGCCTCTGCCTCCCAAGTGC  239

seq1  TGGGATTAAAGGCGTGTGCCACCACCACCCGGCTTGTTTTTTAATTAAG-  298
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGGATTAAAGGCGTGTGCCACCACCACCCGGCTTGTTTTTTAATTAAGA  289

seq1  AAAAATGAAAGTACTGATTTAGCACTAAAAAAGAAGGAATGAGGAAAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAAGTACTGATTTAGCACTAAAAAAGAAGGAATGAGGAAAAGA  339

seq1  AAGCAAGCTAGAAAGGAAGGAAGGGAACGATGGTTCGATGGTGCCAGAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCTAGAAAGGAAGGAAGGGAACGATGGTTCGATGGTGCCAGAAG  389

seq1  CAGTAGTGAGAGGAGAGTAAGCGGTGCTGGATAAACAAAAATGGCAGAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTGAGAGGAGAGTAAGCGGTGCTGGATAAACAAAAATGGCAGAGA  439

seq1  AGGGGAGGGAAGAGACAGGAAGGGAGATGGGGGTGGAGCAGGAGAGAGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGGAAGAGACAGGAAGGGAGATGGGGGTGGAGCAGGAGAGAGAG  489

seq1  AGGGGAGGTAGAGAGGGAAAGAGAGAAGGAGGGAGGGGAGGGGGAGAGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGTAGAGAGGGAAAGAGAGAAGGAGGGAGGGGAGGGGGAGAGAG  539

seq1  GAGAGGGAGAGAGGGGGGAAAGGGAGAGGGAGAAAAGGGAAGAGGGAGAG  598
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGAGAGAGGGGGGAAAGGGAGAGGGAGAAAAGGGAAGAGGGAGAG  589

seq1  GAGAAAGGAGGAAAGGGAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGAGGAAAGGGAGAGGGAGAGGGAGAGAGAGAGAGAGAGAGAGA  639

seq1  GAGAGAGAGAGAGAAGAGGAGAGGGGAGAGGGAGAGAGAGGGAGCTGGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAAGAGGAGAGGGGAGAGGGAGAGAGAGGGAGCTGGAG  689

seq1  GGGGAGTTTCTTAGCAGCAAGGGCACTTTTGTCTTGGGGGTTGTTAACTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTTTCTTAGCAGCAAGGGCACTTTTGTCTTGGGGGTTGTTAACTT  739

seq1  GGATGGGATGGGAGAACTGGGAGGTAATAAGTCATTCTCTGAGGTGCAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGATGGGAGAACTGGGAGGTAATAAGTCATTCTCTGAGGTGCAAA  789

seq1  CAGGTCAGACCAGAAAGTGCTGTTTGCAGGCTGGGTCCTGCCTGACTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAGACCAGAAAGTGCTGTTTGCAGGCTGGGTCCTGCCTGACTTCC  839

seq1  TCACCCTGGCACACAGGCCTCTACAACTGCTGCAGAGTTGAATTC  893
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGGCACACAGGCCTCTACAACTGCTGCAGAGTTGAATTC  884