BAC Information

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BAC

Clone NameB6Ng01-087L07
Chromosome14 (Build37)
Map Location 9,534,713 - 9,535,867
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
Downstream geneLOC100041948, Fhit
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087L07.bB6Ng01-087L07.g
ACCDH900756DH900757
length1,2071,144
definitionDH900756|Mus musculus domesticus DNA, BAC clone: B6Ng01-087L07, 5' end.DH900757|Mus musculus domesticus DNA, BAC clone: B6Ng01-087L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagcccccattccctgatgaatgttcctaagagatagagcaagt
aagggcacctacctcacctgttttgaaatgtctctaagagataaagcaag
atagagcacctaccccagaattcccataacctactttaaatccagcctgt
gagctcacttggatgtccttctgcttggtaatgggagaccccagaatgct
ggacttctgcataataaaacactctgcatttacatactatttgaggagag
tagcagcagactaacttgctagtttgcaatccatagggcaaaatccccat
ctctcatagctcctggtgatctgtggcttcctgtaaatataaaccatcat
tcacactgcttagcctcattccctcttgtgcttttctctgcatgacctca
gcttgctgactccttctggcacaagagcttaagctccatcaggtagggct
tggctttgaaagaacctagtggggaaacccccactcaatttccgttcgga
gcgcacccaagaatcacgaacagacgaccatcttgatgtaaaagcatgag
gtagtttaatgacggagctccaggccaacacatatctcccacaggagaca
gagatgtcgaccacatggtggagccataatggcggagctccagtttgaaa
cgtatctcactcaggagacagtggtttcgaccccgaggcttggatgctag
ggacttttatagaaaaggggtggggctgggggaggaattagcatggtttc
acatgattggtccatttaaacattaacagactgtcagaagggccagagat
agggaggcactaggccagtcaggacatgtaacaacgggcctgcctgggca
tgtcctggcctgttctgctatgttctcagccccaggtttcaaagctcaca
aacaactctttgggctatttgacataaattacatgaatcacaggtctcaa
ggtttatttcctttcagcttcatttacctgtatcgcaaatctgaaacaat
tgcagaaccatagtggtctttgtactgctctagttcagtatgaatctgga
gagtagagccccaaagaggcaaattaaagtctcaagaataggcactttat
tcagcaactggacattatatttattaattagcatctgagggtagcaagtc
atgtgaacagagcagtcatggtgggaaattaatatattatataataagat
atcaacg
gaattcactaagttctgtgaataatgattttacatataaacgtgtcctgt
tgctcaagatggaatttattaataacatgtgcacgaaggaatagtgtttc
gcttaaggattacaatttgttggctcattatatgtaggaattgtgaagtg
cttacctaataattctaggcatcaaaaagaagttcaagactatctttgat
ttagccagtcagaatacatacacatgaaatggtgttaaataaaaccctgg
gtaatcattcattaagtacagtcctataattgaactgataggaagtgtct
tagggtttcttttcctgtgaagagacaccatgaccatggcaactcctata
acaagtacaattagctggggatggtttacagttccagatgtttagtccat
tattgtcatggtgagaagcatggtaatgtgcagactgacatggtgttgga
gaagaagctgaccctaatggtcctgatagtgatattccctatgagcctat
gggggttatttttttcaaacaaccatagtgttagaggtaggaaatgctag
aataaagaaataatgaataaggaatagagaaagtaatgtttatgcagtga
attcaagaaaaagacttgtggagtgtttccattatgccaaagactgtgtt
gtgttaggatgctaaggaatcaagatggatcttgtggtcactttattgag
gtcttctgagcaatgtgtaaaaatggccaaccttccataggaataccaaa
gaagcacgtgtctgtgtttgtgagtcgatatgtacccattcttgaatatt
ggtgtgaaatttttagaaaaacagaaaattcataaaactgtgtgtattgt
taaacacagttgccacttgtgatgtttatttctagttactttgggaagaa
atgacttaccaagatttgtcccaagccttccttctctcaatagactaacc
atttatatttcaggaaaatagaaagttgaactctgcaaagtaggatattg
gttaagaaaagcatggggtagctttgaactcagtttgtagagactatggt
ggcaaataaggtgaatatttgagaatcattgtctatgtagagaaacagca
cagggaatgcctggtagcaagcagattcttgtagccttcccagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9534713_9535867
seq2: B6Ng01-087L07.g_70_1213

seq1  GAATTCACTAAGTTCTGTGAATAATGATTTTACATATAAACGTGTCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGTTCTGTGAATAATGATTTTACATATAAACGTGTCCTGT  50

seq1  TGCTCAAGATGGAATTTATTAATAACATGTGCACGAAGGAATAGTGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAAGATGGAATTTATTAATAACATGTGCACGAAGGAATAGTGTTTC  100

seq1  GCTTAAGGATTACAATTTGTTGGCTCATTATATGTAGGAATTGTGAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGGATTACAATTTGTTGGCTCATTATATGTAGGAATTGTGAAGTG  150

seq1  CTTACCTAATAATTCTAGGCATCAAAAAGAAGTTCAAGACTATCTTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTAATAATTCTAGGCATCAAAAAGAAGTTCAAGACTATCTTTGAT  200

seq1  TTAGCCAGTCAGAATACATACACATGAAATGGTGTTAAATAAAACCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAGTCAGAATACATACACATGAAATGGTGTTAAATAAAACCCTGG  250

seq1  GTAATCATTCATTAAGTACAGTCCTATAATTGAACTGATAGGAAGTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCATTCATTAAGTACAGTCCTATAATTGAACTGATAGGAAGTGTCT  300

seq1  TAGGGTTTCTTTTCCTGTGAAGAGACACCATGACCATGGCAACTCCTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTTCTTTTCCTGTGAAGAGACACCATGACCATGGCAACTCCTATA  350

seq1  ACAAGTACAATTAGCTGGGGATGGTTTACAGTTCCAGATGTTTAGTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTACAATTAGCTGGGGATGGTTTACAGTTCCAGATGTTTAGTCCAT  400

seq1  TATTGTCATGGTGAGAAGCATGGTAATGTGCAGACTGACATGGTGTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCATGGTGAGAAGCATGGTAATGTGCAGACTGACATGGTGTTGGA  450

seq1  GAAGAAGCTGACCCTAATGGTCCTGATAGTGATATTCCCTATGAGCCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCTGACCCTAATGGTCCTGATAGTGATATTCCCTATGAGCCTAT  500

seq1  GGGGGTTATTTTTTTCAAACAACCATAGTGTTAGAGGTAGGAAATGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTATTTTTTTCAAACAACCATAGTGTTAGAGGTAGGAAATGCTAG  550

seq1  AATAAAGAAATAATGAATAAGGAATAGAGAAAGTAATGTTTATGCAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAAATAATGAATAAGGAATAGAGAAAGTAATGTTTATGCAGTGA  600

seq1  ATTCAAGAAAAAGACTTGTGGAGTGTTTCCATTATGCCAAAGACTGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGAAAAAGACTTGTGGAGTGTTTCCATTATGCCAAAGACTGTGTT  650

seq1  GTGTTAGGATGCTAAGGAATCAAGATGGATCTTGTGGTCACTTTATTGGG  700
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTGTTAGGATGCTAAGGAATCAAGATGGATCTTGTGGTCACTTTATTGAG  700

seq1  GTCTTCTGAGCAATGTGTAAAAATGGCCAACCTTCCATAGGAATACCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTGAGCAATGTGTAAAAATGGCCAACCTTCCATAGGAATACCAAA  750

seq1  GAAGCACGTGTCTGTGTTTGTGAGTCGATATGTACCCATTCTTGAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACGTGTCTGTGTTTGTGAGTCGATATGTACCCATTCTTGAATATT  800

seq1  GGTGTGAAATTTTTAGAAAAACAGAAAATTCATAAAACTGTGTGTATTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAAATTTTTAGAAAAACAGAAAATTCATAAAACTGTGTGTATTGT  850

seq1  TAAACACAGTTGCCACTTGTGATGTTTATTTCTAGTTACTTT-GGAAGAA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAACACAGTTGCCACTTGTGATGTTTATTTCTAGTTACTTTGGGAAGAA  900

seq1  ATGACTTACCAAGATTTGTCCCAAGCCTTCCTTCTCTCAATAGACTAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTACCAAGATTTGTCCCAAGCCTTCCTTCTCTCAATAGACTAACC  950

seq1  ATTTATATTTCAGGAAAATAAGAAAGTTGAACTCTGCAAAGTAGGATATT  999
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTTATATTTCAGGAAAAT-AGAAAGTTGAACTCTGCAAAGTAGGATATT  999

seq1  GGTTAAAGAAAAGCATGGGGTAGCCTTTGAAACTCAGTTTGTAGAGACTA  1049
      |||| |||||||||||||||||| ||||| ||||||||||||||||||||
seq2  GGTT-AAGAAAAGCATGGGGTAG-CTTTG-AACTCAGTTTGTAGAGACTA  1046

seq1  TGTGGCCAAATAAGTTGATATA-TTGAGAAAGCATTTGTCTATGTAGAGA  1098
      ||  | |||||||| ||| ||| ||||| || || |||||||||||||||
seq2  TGGTGGCAAATAAGGTGA-ATATTTGAG-AATCA-TTGTCTATGTAGAGA  1093

seq1  AACAGCACAGGGAGATGCCTGGGAAGCAAAAGCAAGATGTCTGTAGCCTC  1148
      ||||||||||||| |||||| || |||  |||| ||||   |||||||| 
seq2  AACAGCACAGGGA-ATGCCT-GGTAGC--AAGC-AGATTCTTGTAGCCT-  1137

seq1  CCCCAGC  1155
       ||||||
seq2  TCCCAGC  1144