BAC Information

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BAC

Clone NameB6Ng01-088F10
Chromosome14 (Build37)
Map Location 14,600,615 - 14,601,216
singlet/doubletsinglet
Overlap genenone
Upstream geneCadps, EG432822, LOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik
Downstream geneEG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088F10.b
ACCDH901218
length861
definitionDH901218|Mus musculus domesticus DNA, BAC clone: B6Ng01-088F10, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacattatagcttcatgtaaccaggaaatcccgtggcacacttta
gtgtgtttatcttgtttcatttgtgataatgtcttccagttccttccttg
ttgctgcaggtccattttttatggctaaggcatgttccattgtatatacc
atattttctttttccaggaatctgctgtgggatacagttggacgctcctg
accttaacctgtacatgtatggctggagtaagactggggatataggtaag
tatgggaatgcctttactatatagtaaagactatatagactacccataat
ttctgtgactgggagacagaaggactgtgggtttgggttagaggcaggct
tgcagttctgccatgagtgatgtttttgatgtgttcttaaatttggtttt
caggtaatttactgagtattttttacatccaggctcattagcaaaatttg
tttgaaaacatctttctttgttgagccttttatgtagtttaggatcaggg
tgacattggcctcatagaatcaggttgacagtgttccttcagtattttgt
gtattatgttgaggagtattgatatccgctcttctttgaaagtctgatag
aattctgtgcaaaaactatctgacactcagctttcttttttggcttggat
ggctttttaaagtctgcttctcttttcttacaggttatagaactgtttta
tatagtttacttgattttgattgaactttggtaagttgtatctgtctaga
aaatcaaccattcatttagattttcgaattttgtggaagacaggtttttt
aagtaagacctaatgatttttattcttcagtttctgttgttatgtctccc
ttttctgattt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14600615_14601216
seq2: B6Ng01-088F10.b_305_905

seq1  CCTTTACTATATAGTAAAGACTATATAGACTACCCATAATTTCTGTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACTATATAGTAAAGACTATATAGACTACCCATAATTTCTGTGACT  50

seq1  GGGAGACAGAAGGACTGTGGGTTTGGGTTAGAGGCAGGCTTGCAGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACAGAAGGACTGTGGGTTTGGGTTAGAGGCAGGCTTGCAGTTCTG  100

seq1  CCATGAGTGATGTTTTTGATGTGTTCTTAAATTTGGTTTTCAGGTAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGTGATGTTTTTGATGTGTTCTTAAATTTGGTTTTCAGGTAATTT  150

seq1  ACTGAGTATTTTTTACATCCAGGCTCATTAGCAAAATTTGTTTGAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTATTTTTTACATCCAGGCTCATTAGCAAAATTTGTTTGAAAACA  200

seq1  TCTTTCTTTGTTGAGCCTTTTATGTAGTTTAGGATCAGGGTGACATTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTGTTGAGCCTTTTATGTAGTTTAGGATCAGGGTGACATTGGC  250

seq1  CTCATAGAATCAGGTTGACAGTGTTCCTTCAGTATTTTGTGTATTATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGAATCAGGTTGACAGTGTTCCTTCAGTATTTTGTGTATTATGTT  300

seq1  GAGGAGTATTGATATCCGCTCTTCTTTGAAAGTCTGATAGAATTCTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTATTGATATCCGCTCTTCTTTGAAAGTCTGATAGAATTCTGTGC  350

seq1  AAAAACTATCTGACACTCAGCTTTCTTTTTTGGCTTGGATGGC-TTTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAAACTATCTGACACTCAGCTTTCTTTTTTGGCTTGGATGGCTTTTTAA  400

seq1  AGTCTGCTTCTCTTTTCTTACAGGTTATAGAACTG-TTTATATAGTTTAC  448
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTCTGCTTCTCTTTTCTTACAGGTTATAGAACTGTTTTATATAGTTTAC  450

seq1  TTGATTTTGATTGAACTTTGGTAAGTTGTATCTGTCTAGAAAATCAACCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGATTGAACTTTGGTAAGTTGTATCTGTCTAGAAAATCAACCA  500

seq1  TTCATTTAGATTTTCGAATTTTGTGGAAGACAGGTTTTTTAAGTAAGACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTAGATTTTCGAATTTTGTGGAAGACAGGTTTTTTAAGTAAGACC  550

seq1  TAATGATTTTTTTATTTCTTCAGTTTCTGTTGTTATGTCTCCCTTTTCTG  598
      |||||||||||    |||||||||||||||||||||||||||||||||||
seq2  TAATGATTTTT---ATTCTTCAGTTTCTGTTGTTATGTCTCCCTTTTCTG  597

seq1  ATTT  602
      ||||
seq2  ATTT  601