BAC Information

Click to search

BAC

Clone NameB6Ng01-088K14
Chromosome14 (Build37)
Map Location 43,422,135 - 43,422,752
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209
Downstream gene1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088K14.bB6Ng01-088K14.g
ACCDH901454DH901455
length1,173618
definitionDH901454|Mus musculus domesticus DNA, BAC clone: B6Ng01-088K14, 5' end.DH901455|Mus musculus domesticus DNA, BAC clone: B6Ng01-088K14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagccaaacttgtcaataaacagtgaatgatttatgaatagat
gggaaacttcatggtgcatgcagaattcagagttctggtctcaggaagta
aagaatttttcttgaatggaaacactacaaaactctcagtagagttcagg
aaaaggtggatgggcctcattcttactttgggcctattgtacccaaatac
agtgagggattcatgcctatactatttgagtggaatccctgctgcattgt
tttccaggctcagcggtaatcagctacccaaactataactaatacttttt
cattacccgttttctccagttccccataaaggttattcatctgactacct
gagagacagagtgggcttctgactaccacaccatcccccagacaccttgg
accaatgtcatagtgatattgcatagctcaagatggtagacaaagacaac
acaatcaatttggaaaggctttacatgatttttccactattttactggag
agtttaggtagcattttagcatgcattcagcacacccaggtcaagaaggt
agaaggaacagatgtcaatgccagagcccctcctgaaattatggatccat
taaaattgaggtttcactggacccgaggcctgttcatcctctatccatcc
aattgagtcttaggtatcttatgaatacaggatcatattccaatctccaa
cagactcaggcctagaactgggaactcaaaaatgtagaaactggagaagt
gagagctaatgggactacgaagaagcaatccaatgtccctgttggccttt
gttcacagatgcctattttgtctgggtgttttggagatagagagaatgtg
ggattttagcttttgaagaagggacataaactttacaatttgatgttgcc
cctgtccctgacttcttctattgccaagtacaaggagtttcattgcaaag
aaatggggttgtaaatcagagatttcatgaaaacccattgctcactttta
tgaaacaatgtctcctctcaagcagttgcacacttaacaatatactcact
tgtgtaagttaaaggtgcaggagtaggttttggagttggaaacagagaca
ctggtaaatcgactgtttggtacatgactgaccctgagtaattttattgg
agaaaatctccctcatgaaggtt
gaattctaggagaagctgcagtgcagccagatttggaggagtcccaaaac
cctcctgggacaactagtcatggagtttgttcagcagccatctgtctgca
ggagtcagggtgttcttcagagtcacatctcttctctaaagctttgaaga
accacctgtctgagggccagaagctcttgtgggtatctgctgatgcagag
ttagaaacagctctactaagtactcagcctgatgcacagagtcctaaggg
gagacacagcaaatacagaggtctgaaggaaaggacaaagtacccaaaat
ctgagtatccaaggctgtatcctcagattagaaagacaacagaaaaaatg
gagagggaacccagtaagtgacaatggggagaagggaggccaggtgttcc
tggtggtcatgaactctgcacagagttcacagcaaatttcaatgtggatt
atgaaagtagaaaatgttcactttcttttattacattcaccttgtttggg
cagataatccatacaggaaggctgtgaaagggctaagaaagaaagttgat
ctcagagaaacaagaggactggggttctctagtgtagtatactgtattgt
ggtgtggtggggtgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43422135_43422752
seq2: B6Ng01-088K14.g_67_684

seq1  GAATTCTAGGAGAAGCTGCAGTGCAGCCAGATTTGGAGGAGTCCCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAGAAGCTGCAGTGCAGCCAGATTTGGAGGAGTCCCAAAAC  50

seq1  CCTCCTGGGACAACTAGTCATGGAGTTTGTTCAGCAGCCATCTGTCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGGACAACTAGTCATGGAGTTTGTTCAGCAGCCATCTGTCTGCA  100

seq1  GGAGTCAGGGTGTTCTTCAGAGTCACATCTCTTCTCTAAAGCTTTGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAGGGTGTTCTTCAGAGTCACATCTCTTCTCTAAAGCTTTGAAGA  150

seq1  ACCACCTGTCTGAGGGCCAGAAGCTCTTGTGGGTATCTGCTGATGCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCTGTCTGAGGGCCAGAAGCTCTTGTGGGTATCTGCTGATGCAGAG  200

seq1  TTAGAAACAGCTCTACTAAGTACTCAGCCTGATGCACAGAGTCCTAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAACAGCTCTACTAAGTACTCAGCCTGATGCACAGAGTCCTAAGGG  250

seq1  GAGACACAGCAAATACAGAGGTCTGAAGGAAAGGACAAAGTACCCAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACAGCAAATACAGAGGTCTGAAGGAAAGGACAAAGTACCCAAAAT  300

seq1  CTGAGTATCCAAGGCTGTATCCTCAGATTAGAAAGACAACAGAAAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTATCCAAGGCTGTATCCTCAGATTAGAAAGACAACAGAAAAAATG  350

seq1  GAGAGGGAACCCAGTAAGTGACAATGGGGAGAAGGGAGGCCAGGTGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGAACCCAGTAAGTGACAATGGGGAGAAGGGAGGCCAGGTGTTCC  400

seq1  TGGTGGTCATGAACTCTGCACAGAGTTCACAGCAAATTTCAATGTGGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTCATGAACTCTGCACAGAGTTCACAGCAAATTTCAATGTGGATT  450

seq1  ATGAAAGTAGAAAATGTTCACTTTCTTTTATTACATTCACCTTGTTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGTAGAAAATGTTCACTTTCTTTTATTACATTCACCTTGTTTGGG  500

seq1  CAGATAATCCATACAGGAAGGCTGTGAAAGGGCTAAGAAAGAAAGTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATCCATACAGGAAGGCTGTGAAAGGGCTAAGAAAGAAAGTTGAT  550

seq1  CTCAGAGAAACAAGAGGACTGGGGTTCTCTAGTGTAGTATACTGTATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGAAACAAGAGGACTGGGGTTCTCTAGTGTAGTATACTGTATTGT  600

seq1  GGTGTGGTGGGGTGTGTT  618
      ||||||||||||||||||
seq2  GGTGTGGTGGGGTGTGTT  618